Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 2.1e-310 1068.1 524 100.0
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 2.3e-277 958.4 524 92.2
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 3.1e-141 506.1 519 52.2
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 4.0e-136 489.2 567 48.1
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 7.0e-125 451.8 541 45.7
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 1.3e-123 447.6 320 66.9
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 4.4e-119 432.6 527 43.6
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 4.4e-119 432.6 527 43.6
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 3.7e-118 429.5 563 42.3
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 8.1e-113 411.8 318 61.6
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.8e-111 405.6 563 41.9
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.8e-111 405.6 563 41.9
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.8e-111 405.6 563 41.9
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 2.1e-108 397.1 567 39.2
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 3.0e-107 393.3 320 57.5
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 8.7e-107 391.7 539 39.0
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 2.4e-104 383.6 309 57.0
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 2.0e-103 380.6 318 58.8
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-101 374.4 461 45.6
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 3.9e-99 366.3 309 57.6
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 1.1e-98 364.8 487 43.1
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 1.2e-95 354.8 448 42.4
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.8e-95 352.4 368 50.8
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 7.1e-93 345.5 249 64.3
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 4.6e-92 342.8 275 58.9
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 5.6e-90 335.9 534 37.5
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.5e-87 327.8 463 41.7
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 9.9e-87 325.1 332 49.7
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 5.5e-69 266.2 356 41.3
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.4e-64 250.8 508 33.9
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.4e-63 246.9 317 44.8
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.1e-56 225.3 154 66.2
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.4e-56 224.9 483 34.8
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.0e-54 216.5 459 32.5
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 1.4e-51 208.4 436 32.1
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 2.6e-50 204.1 340 35.6
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 5.0e-46 189.9 280 40.7
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.5e-46 189.5 391 32.0
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 7.2e-45 186.0 368 34.2
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.3e-41 172.9 261 39.1
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 1.2e-39 168.7 151 55.0
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.3e-38 165.2 152 57.2
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 2.2e-38 164.5 131 58.8
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 5.2e-35 153.3 151 55.0
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 9.1e-32 142.5 136 50.7
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 6.6e-30 136.3 274 31.0
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 4.2e-29 133.7 105 60.0
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.7e-28 130.2 261 31.8
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 1.8e-27 128.3 114 50.0
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-27 128.3 101 57.4
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-27 128.3 101 57.4
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 5.2e-27 126.7 458 25.5
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 8.9e-27 125.9 94 63.8
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 1.2e-26 125.6 84 69.0
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 1.3e-25 122.1 120 52.5
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 1.7e-25 121.7 99 54.5
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 1.3e-22 112.1 113 54.0
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 2.3e-22 111.3 106 56.6
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 3.8e-22 110.5 96 58.3
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.1e-20 103.2 112 47.3
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 8.9e-19 99.4 68 69.1
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 1.2e-18 99.0 60 70.0
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 5.8e-18 96.7 101 47.5
Oeu022816.1 Olea europaea HOM05D004909 ORTHO05D009316 7.5e-18 96.3 101 53.5
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.9e-17 93.6 76 57.9
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.1e-16 92.4 64 64.1
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.9e-16 91.7 74 62.2
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 2.0e-15 88.2 62 64.5
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.7e-15 87.8 119 40.3
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 7.8e-15 86.3 360 24.4
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 1.7e-14 85.1 71 56.3
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 1.8e-11 75.1 47 63.8
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 5.2e-11 73.6 77 49.4
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 1.3e-09 68.9 104 37.5
arahy.Tifrunner.gnm1.ann1.0IJH8U Arachis hypogaea HOM05D012997 ORTHO05D014434 3.0e-06 57.8 39 71.8
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 3.9e-06 57.4 44 56.8


User provided reference genes

Program Settings