Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 1.1e-68 263.1 128 100.0
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.6e-65 250.4 128 92.2
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.2e-64 248.8 128 89.8
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.2e-62 243.0 128 89.8
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.6e-62 242.7 128 89.8
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 3.8e-56 221.5 128 77.3
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 2.5e-55 218.8 132 76.5
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 3.2e-55 218.4 133 76.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 77.3
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 2.1e-54 215.7 134 76.1
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.7e-54 215.3 129 79.1
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 77.3
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.3e-53 213.0 128 75.8
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 1.8e-53 212.6 128 76.6
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 5.1e-53 211.1 128 75.8
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 5.1e-53 211.1 128 75.0
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 8.7e-53 210.3 130 76.2
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 74.2
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 74.2
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.9e-52 209.1 128 76.6
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.5e-52 208.8 130 76.9
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 2.5e-52 208.8 130 75.4
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.3e-52 208.4 130 76.9
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 3.3e-52 208.4 130 76.2
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 3.3e-52 208.4 129 76.0
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 4.3e-52 208.0 128 75.0
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 4.3e-52 208.0 130 76.9
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 5.7e-52 207.6 128 75.0
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 7.4e-52 207.2 131 73.3
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 7.4e-52 207.2 131 73.3
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 7.4e-52 207.2 131 73.3
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 9.6e-52 206.8 129 76.7
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 74.8
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.6e-51 206.1 128 76.6
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.1e-51 205.7 127 77.2
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 2.8e-51 205.3 131 73.3
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.8e-51 205.3 128 75.0
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 3.7e-51 204.9 131 71.8
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 4.8e-51 204.5 130 72.3
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-50 203.4 130 72.3
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-50 203.4 130 72.3
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.4e-50 203.0 130 73.8
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 72.3
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 2.4e-50 202.2 128 73.4
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.4e-50 202.2 129 76.0
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.4e-50 202.2 129 74.4
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 2.4e-50 202.2 128 73.4
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 3.1e-50 201.8 134 71.6
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 76.0
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 76.0
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 75.2
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 72.3
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 71.5
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 73.8
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 73.8
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 4.1e-50 201.4 129 75.2
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.3e-50 201.1 128 72.7
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 5.3e-50 201.1 128 73.4
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.3e-50 201.1 129 72.1
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.9e-50 200.7 133 72.2
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 6.9e-50 200.7 132 69.7
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 9.0e-50 200.3 131 71.8
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 9.0e-50 200.3 129 74.4
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.5e-49 199.5 132 73.5
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.5e-49 199.5 128 72.7
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.0e-49 199.1 131 72.5
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 2.0e-49 199.1 130 70.8
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.0e-49 199.1 130 71.5
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.0e-49 199.1 129 72.9
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.6e-49 198.7 131 71.0
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.4e-49 198.4 128 70.3
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 5.8e-49 197.6 128 72.7
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 5.8e-49 197.6 134 68.7
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 5.8e-49 197.6 128 71.9
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 7.6e-49 197.2 131 74.8
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 7.6e-49 197.2 133 70.7
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 7.6e-49 197.2 132 73.5
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 7.6e-49 197.2 129 68.2
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 7.6e-49 197.2 128 71.9
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.0e-48 196.8 128 71.1
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.7e-48 196.1 131 73.3
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.7e-48 196.1 128 71.9
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.7e-48 196.1 129 72.1
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 2.2e-48 195.7 132 72.0
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.2e-48 195.7 128 71.1
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 2.2e-48 195.7 131 67.9
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 6.5e-48 194.1 115 75.7
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 8.4e-48 193.7 127 70.9
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 8.4e-48 193.7 128 68.8
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.1e-47 193.4 130 70.8
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.4e-47 193.0 128 70.3
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.4e-47 193.0 130 70.8
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.4e-47 193.0 133 69.9
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.4e-47 193.0 134 69.4
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.4e-47 193.0 130 70.8
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.9e-47 192.6 133 68.4
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 130 70.0
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 4.2e-47 191.4 129 70.5
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 5.5e-47 191.0 120 75.0
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 9.3e-47 190.3 121 71.9
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 132 72.0
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 71.1
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 2.1e-46 189.1 129 69.8
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 120 74.2
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 133 64.7
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 133 66.2
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 6.1e-46 187.6 145 65.5
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.0e-45 186.8 133 66.9
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.0e-45 186.8 129 69.8
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.8e-45 186.0 133 66.2
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.8e-45 186.0 117 72.6
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 3.0e-45 185.3 134 66.4
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 3.0e-45 185.3 117 73.5
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 3.9e-45 184.9 133 65.4
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 5.1e-45 184.5 133 64.7
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 8.7e-45 183.7 128 64.8
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 8.7e-45 183.7 133 64.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 2.5e-44 182.2 133 63.9
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 2.5e-44 182.2 133 63.2
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 2.5e-44 182.2 133 63.2
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.5e-44 182.2 133 67.7
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 3.3e-44 181.8 136 66.2
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 4.3e-44 181.4 133 63.2
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 5.7e-44 181.0 134 63.4
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 5.7e-44 181.0 128 63.3
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 7.4e-44 180.6 119 71.4
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 1.3e-43 179.9 128 68.0
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.6e-43 179.5 134 62.7
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.6e-43 179.5 134 62.7
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.6e-43 179.5 134 62.7
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 2.2e-43 179.1 134 62.7
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.2e-43 179.1 132 63.6
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.8e-43 178.7 115 69.6
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 3.7e-43 178.3 134 61.9
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 3.7e-43 178.3 128 68.8
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 3.7e-43 178.3 128 69.5
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 4.8e-43 177.9 123 68.3
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.4e-42 176.4 124 67.7
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 1.8e-42 176.0 125 68.0
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.2e-41 173.3 120 68.3
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 2.0e-41 172.6 120 67.5
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 8.5e-40 167.2 128 63.3
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 2.1e-38 162.5 137 59.1
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 3.6e-38 161.8 131 61.1
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 8.8e-37 157.1 117 59.0
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 3.3e-36 155.2 119 58.0
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.8e-34 149.4 91 73.6
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 6.9e-34 147.5 115 59.1
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 2.6e-33 145.6 124 57.3
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 7.9e-30 134.0 118 51.7
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 2.6e-28 129.0 74 74.3
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 4.4e-28 128.3 78 75.6
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 9.1e-26 120.6 85 71.8
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.5e-24 114.4 72 69.4
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.5e-23 113.2 73 72.6
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.6e-22 108.6 77 64.9
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.8e-21 106.3 73 61.6
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 6.3e-19 97.8 56 82.1
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.1e-18 97.1 71 60.6
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 7.7e-17 90.9 60 73.3
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 7.5e-12 74.3 50 68.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 4.8e-11 71.6 60 55.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 5.4e-10 68.2 94 34.0
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 7.2e-07 57.8 43 58.1


User provided reference genes

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