Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.9e-84 315.8 167 100.0
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 4.5e-65 251.5 163 81.0
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.2e-54 216.9 156 75.6
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 2.1e-54 216.1 156 75.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 5.5e-23 111.7 151 48.3
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.2e-22 110.5 150 48.0
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 4.7e-22 108.6 164 43.9
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 8.0e-22 107.8 164 43.3
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 5.2e-21 105.1 164 43.9
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.1e-20 104.0 164 43.3
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.5e-20 103.6 164 43.3
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 9.7e-20 100.9 153 46.4
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 9.7e-20 100.9 145 49.0
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.3e-19 100.5 145 48.3
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.7e-19 100.1 176 43.2
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 4.8e-19 98.6 162 42.6
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 8.2e-19 97.8 157 43.3
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.4e-18 97.1 165 40.0
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.4e-18 97.1 165 40.0
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.4e-18 97.1 161 41.6
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 5.3e-18 95.1 176 40.9
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 5.3e-18 95.1 163 41.1
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 5.3e-18 95.1 152 44.1
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 7.0e-18 94.7 165 42.4
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 2.6e-17 92.8 162 41.4
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 4.5e-17 92.0 169 39.6
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 5.9e-17 91.7 145 46.2
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 7.7e-17 91.3 141 44.0
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.0e-16 90.9 161 37.3
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.2e-16 89.7 134 46.3
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.9e-16 89.4 161 42.9
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 5.0e-16 88.6 167 40.7
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.9e-15 86.7 163 39.3
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 2.5e-15 86.3 154 41.6
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.5e-15 86.3 163 39.9
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 5.5e-15 85.1 173 38.7
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 9.4e-15 84.3 166 36.7
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.1e-14 83.2 116 45.7
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 2.7e-14 82.8 174 39.7
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.7e-14 82.8 165 38.2
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.1e-14 81.6 107 49.5
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 8.0e-14 81.3 142 43.7
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.4e-13 80.5 162 38.9
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 3.0e-13 79.3 154 38.3
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.0e-13 79.0 162 37.7
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 6.7e-13 78.2 163 38.7
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.2e-12 77.4 183 37.2
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 2.6e-12 76.3 151 39.7
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 5.7e-12 75.1 161 36.6
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 9.7e-12 74.3 167 35.3
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.3e-11 73.9 157 36.3
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 2.8e-11 72.8 164 37.8
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 1.4e-10 70.5 155 36.1
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.8e-10 70.1 196 33.7
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 4.1e-10 68.9 160 36.9
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 7.0e-10 68.2 121 39.7
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 9.1e-10 67.8 146 38.4
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.6e-09 67.0 89 44.9
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.0e-09 66.6 92 43.5
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 5.9e-09 65.1 127 37.0
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 5.9e-09 65.1 107 41.1
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 2.2e-08 63.2 169 35.5
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 8.5e-08 61.2 209 30.1
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 4.2e-07 58.9 158 36.1
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 9.4e-07 57.8 167 33.5
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.2e-06 57.4 159 36.5
Nitab4.5_0000804g0140 Nicotiana tabacum HOM05D023668 ORTHO05D009793 4.7e-06 55.5 94 42.6
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 4.7e-06 55.5 154 36.4
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 6.1e-06 55.1 95 40.0
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 6.1e-06 55.1 92 40.2


User provided reference genes

Program Settings