Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 0.0e+00 1172.1 595 100.0
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 0.0e+00 1086.6 595 91.8
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 0.0e+00 1083.9 598 92.0
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 3.5e-290 1001.1 570 83.9
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 3.5e-290 1001.1 567 84.7
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 1.5e-288 995.7 566 84.5
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 1.9e-288 995.3 568 83.5
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 3.3e-288 994.6 567 84.7
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.3e-287 992.6 596 83.4
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 3.7e-287 991.1 567 84.0
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 4.0e-286 987.6 566 83.0
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 5.8e-285 983.8 573 82.4
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.0e-284 983.0 566 83.4
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.7e-284 982.2 572 82.0
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 8.4e-284 979.9 568 82.7
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.5e-283 978.4 568 82.6
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 3.2e-283 978.0 568 83.1
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.2e-283 978.0 596 80.7
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 7.1e-283 976.9 570 81.9
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 7.9e-282 973.4 567 81.5
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 6.7e-281 970.3 568 81.3
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.1e-280 969.5 573 81.0
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.5e-280 968.4 567 81.1
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.5e-280 968.4 567 81.1
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.5e-280 968.4 566 83.6
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 3.3e-280 968.0 566 82.2
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.3e-280 968.0 567 81.1
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 4.3e-280 967.6 571 81.3
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.1e-278 963.0 569 80.8
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 2.4e-278 961.8 576 79.7
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 3.4e-277 958.0 574 79.3
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 2.2e-276 955.3 571 80.4
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 6.5e-276 953.7 550 82.4
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 3.6e-274 948.0 569 80.0
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 6.1e-274 947.2 555 80.4
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.0e-273 946.4 566 80.9
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 1.4e-273 946.0 577 78.7
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.9e-273 944.5 594 76.9
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 5.1e-273 944.1 594 76.9
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 6.7e-273 943.7 568 80.6
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.1e-272 943.0 566 79.3
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 1.5e-272 942.6 571 78.8
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 2.0e-272 942.2 576 77.8
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 3.3e-272 941.4 600 78.2
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.3e-272 941.0 594 76.9
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 4.3e-272 941.0 571 78.8
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 9.7e-272 939.9 594 76.8
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 1.7e-271 939.1 600 76.0
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 2.2e-271 938.7 567 80.2
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.8e-271 938.3 619 75.0
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 3.7e-271 937.9 566 78.4
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 8.2e-271 936.8 578 78.0
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 1.1e-270 936.4 568 78.5
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.4e-270 936.0 619 74.3
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 1.8e-270 935.6 590 77.8
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 6.9e-270 933.7 567 79.0
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 9.1e-270 933.3 557 79.7
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.5e-269 932.6 574 78.4
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 2.0e-269 932.2 561 78.8
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 5.9e-269 930.6 567 79.4
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 5.5e-267 924.1 573 78.4
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 1.2e-266 922.9 600 75.0
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.6e-266 922.5 574 78.4
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 3.6e-266 921.4 574 78.4
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 6.1e-266 920.6 570 75.6
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.0e-265 919.8 559 80.0
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 1.8e-265 919.1 568 78.0
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.8e-265 919.1 569 78.0
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 3.0e-265 918.3 569 77.0
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 5.1e-265 917.5 560 79.1
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 5.1e-265 917.5 597 74.0
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 6.7e-265 917.1 567 79.0
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 1.1e-264 916.4 539 80.7
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.1e-264 916.4 572 78.0
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 2.0e-264 915.6 576 74.5
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 4.4e-264 914.4 670 69.4
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.7e-264 914.1 571 77.4
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 5.7e-264 914.1 568 77.1
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 9.7e-264 913.3 572 76.9
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 2.2e-263 912.1 600 75.0
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 6.3e-263 910.6 589 76.1
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 8.2e-263 910.2 566 77.0
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 8.2e-263 910.2 581 75.4
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.4e-262 908.7 571 77.4
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 5.3e-262 907.5 574 76.7
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 7.0e-262 907.1 568 76.6
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 9.1e-262 906.7 562 77.4
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.6e-261 905.2 576 76.7
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 2.6e-261 905.2 517 84.5
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.3e-260 902.9 577 76.6
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 2.2e-260 902.1 575 76.7
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 3.8e-260 901.4 575 76.5
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 8.5e-260 900.2 550 77.1
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 1.9e-259 899.0 576 75.2
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 3.2e-259 898.3 574 76.5
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 2.3e-257 892.1 597 73.9
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.0e-257 891.7 586 74.7
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 3.3e-256 888.3 519 83.4
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.8e-255 884.4 570 74.7
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 4.8e-255 884.4 570 74.4
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.4e-254 882.9 570 75.6
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 2.4e-254 882.1 570 74.4
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 2.4e-254 882.1 571 74.6
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 5.3e-254 880.9 571 74.3
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 1.2e-253 879.8 570 74.2
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 1.6e-253 879.4 597 71.7
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 1.6e-253 879.4 570 74.2
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 2.0e-253 879.0 570 74.6
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 5.9e-253 877.5 570 74.9
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.0e-252 876.7 570 74.0
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 1.3e-252 876.3 570 74.2
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 1.3e-252 876.3 604 72.5
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 1.1e-251 873.2 570 73.2
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.9e-251 872.5 566 77.0
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 4.2e-251 871.3 570 73.3
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 5.5e-251 870.9 570 73.3
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 9.4e-251 870.2 570 73.2
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 5.5e-243 844.3 573 73.1
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 9.4e-243 843.6 577 72.8
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.2e-242 843.2 520 78.5
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 5.7e-240 834.3 554 70.6
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 6.3e-239 830.9 905 51.7
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 1.2e-237 826.6 497 80.7
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.9e-235 819.3 546 71.6
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.1e-230 803.5 866 51.7
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.9e-220 768.5 566 67.3
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.7e-215 753.1 568 66.4
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 3.9e-212 741.9 511 71.4
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 5.6e-211 738.0 568 63.0
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 1.9e-206 723.0 402 86.8
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.2e-200 703.7 559 59.6
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 6.6e-196 688.0 427 75.9
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 2.9e-175 619.4 341 88.9
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.6e-170 603.6 434 71.0
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.9e-158 563.5 423 70.2
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.4e-156 557.4 308 91.2
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 2.5e-150 536.6 580 47.6
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.8e-135 486.1 445 60.9
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 2.6e-115 420.2 351 58.4
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 1.2e-101 374.8 408 46.8
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.4e-100 371.3 497 41.4
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 3.3e-94 350.1 212 75.9
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.8e-93 347.1 533 35.1
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 1.1e-89 335.1 187 88.2
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.4e-89 334.7 195 93.3
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 7.1e-89 332.4 202 74.3
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 8.4e-82 308.9 219 70.8
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 4.2e-73 280.0 606 32.8
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.9e-70 271.2 212 61.8
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.9e-70 271.2 212 61.8
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 3.5e-64 250.4 163 71.8
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 2.5e-62 244.2 379 35.1
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 2.2e-50 204.5 228 51.3
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 4.5e-43 180.3 110 81.8
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 6.7e-31 139.8 72 94.4
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 6.3e-29 133.3 122 51.6
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 6.1e-24 116.7 73 71.2
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 1.0e-23 115.9 71 71.8
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.2e-18 98.2 105 54.3
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 1.8e-15 88.6 59 71.2
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 3.1e-12 77.8 49 65.3
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 3.1e-12 77.8 49 65.3
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 1.7e-10 72.0 43 69.8
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 1.7e-10 72.0 48 62.5
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 3.2e-09 67.8 47 68.1
Pp3c6_20370 Physcomitrium patens HOM05D004337 ORTHO05D043897 2.0e-06 58.5 45 55.6


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