Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 9.0e-65 250.0 116 100.0
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 1.2e-48 196.4 121 76.9
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 5.9e-48 194.1 121 74.4
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 3.3e-35 151.8 119 62.2
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 9.7e-35 150.2 120 60.0
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 1.7e-34 149.4 122 57.4
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 1.7e-34 149.4 120 59.2
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 3.7e-34 148.3 122 58.2
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 4.8e-34 147.9 121 59.5
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 4.1e-33 144.8 121 60.3
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 5.3e-33 144.4 120 56.7
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 3.5e-32 141.7 124 59.7
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 4.5e-32 141.4 120 57.5
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 5.9e-32 141.0 120 57.5
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 5.9e-32 141.0 120 57.5
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 8.5e-31 137.1 120 53.3
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.5e-30 136.3 120 55.8
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 1.5e-30 136.3 120 55.8
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 5.5e-30 134.4 118 59.3
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 5.5e-30 134.4 124 56.5
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 5.5e-30 134.4 125 56.0
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 7.2e-30 134.0 122 53.3
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 7.2e-30 134.0 121 58.7
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 1.6e-29 132.9 114 53.5
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 2.7e-29 132.1 118 58.5
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 2.7e-29 132.1 118 58.5
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 6.1e-29 131.0 125 53.6
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 6.1e-29 131.0 125 53.6
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 6.1e-29 131.0 125 53.6
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 6.1e-29 131.0 123 56.1
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 1.0e-28 130.2 121 52.9
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 2.3e-28 129.0 116 53.4
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 5.2e-28 127.9 116 52.6
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 6.7e-28 127.5 131 50.4
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 8.8e-28 127.1 123 52.0
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 1.1e-27 126.7 124 53.2
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 1.1e-27 126.7 115 53.9
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 1.5e-27 126.3 120 54.2
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 1.5e-27 126.3 114 52.6
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 2.0e-27 125.9 104 57.7
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 2.0e-27 125.9 131 49.6
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 3.3e-27 125.2 126 49.2
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 7.4e-27 124.0 124 51.6
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 7.4e-27 124.0 125 52.0
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 1.7e-26 122.9 122 53.3
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 2.4e-25 119.0 130 52.3
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 5.3e-25 117.9 113 51.3
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 5.3e-25 117.9 113 51.3
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 5.3e-25 117.9 123 49.6
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 2.0e-24 115.9 124 51.6
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 4.5e-24 114.8 114 53.5
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 1.0e-23 113.6 121 44.6
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 2.2e-23 112.5 96 51.0
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 3.8e-23 111.7 90 58.9
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 6.5e-23 110.9 158 39.2
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 1.9e-22 109.4 128 47.7
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 2.5e-22 109.0 129 47.3
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 1.0e-20 103.6 118 45.8
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 1.4e-20 103.2 118 46.6
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 1.8e-20 102.8 98 52.0
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.8e-20 102.8 105 51.4
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 1.8e-20 102.8 116 49.1
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 1.8e-20 102.8 116 49.1
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 1.5e-19 99.8 118 47.5
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 1.5e-19 99.8 116 47.4
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 9.7e-19 97.1 115 47.0
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 2.2e-18 95.9 121 45.5
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 1.4e-17 93.2 100 49.0
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 2.0e-16 89.4 101 48.5
ClCG01G020560 Citrullus lanatus HOM05D007821 ORTHO05D009897 2.7e-16 89.0 61 68.9
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 3.5e-16 88.6 102 48.0
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 5.9e-16 87.8 101 48.5
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 7.7e-16 87.4 110 46.4
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 1.3e-15 86.7 100 47.0
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 1.3e-15 86.7 100 47.0
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 1.7e-15 86.3 90 51.1
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 2.2e-15 85.9 115 43.5
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 2.2e-15 85.9 100 46.0
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 2.2e-15 85.9 115 43.5
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 1.5e-14 83.2 95 46.3
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 1.5e-14 83.2 100 45.0
Lalb_Chr09g0334261 Lupinus albus HOM05D007821 ORTHO05D009897 1.5e-14 83.2 61 59.0
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 1.9e-14 82.8 123 42.3
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 1.2e-13 80.1 141 35.5
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 3.0e-12 75.5 96 42.7
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 2.0e-11 72.8 94 46.8
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 7.0e-09 64.3 111 42.3
Cc11_g10110 Coffea canephora HOM05D001188 ORTHO05D001032 4.5e-08 61.6 96 40.6
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 7.7e-08 60.8 89 40.4
SalBow5G0114 Salvia bowleyana HOM05D001188 ORTHO05D001032 8.6e-07 57.4 86 36.0
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 1.5e-06 56.6 87 40.2
Gohir.A12G054100 Gossypium hirsutum HOM05D001188 ORTHO05D001032 1.9e-06 56.2 95 40.0
Hund25061 Selenicereus undatus HOM05D001188 ORTHO05D001032 2.5e-06 55.8 113 35.4
Ah.03g137620 Amaranthus hybridus HOM05D001188 ORTHO05D001032 3.3e-06 55.5 94 38.3
CARHR076560 Cardamine hirsuta HOM05D001188 ORTHO05D001032 4.2e-06 55.1 108 38.0
Rhsim08G0030600 Rhododendron simsii HOM05D007821 ORTHO05D009897 4.2e-06 55.1 57 49.1
Thecc.04G134100 Theobroma cacao HOM05D001188 ORTHO05D001032 4.2e-06 55.1 105 35.2
Atru.chr9.860 Acer truncatum HOM05D001188 ORTHO05D001032 5.5e-06 54.7 88 38.6
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 5.5e-06 54.7 115 37.4
COL.COLO4_09325 Corchorus olitorius HOM05D001188 ORTHO05D001032 5.5e-06 54.7 92 41.3
Gohir.D12G052700 Gossypium hirsutum HOM05D001188 ORTHO05D001032 5.5e-06 54.7 95 40.0
CiPaw.04G042000 Carya illinoinensis HOM05D001188 ORTHO05D001032 9.5e-06 53.9 114 35.1


User provided reference genes

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