Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025721 Sechium edule HOM05D005317 ORTHO05D005146 1.7e-69 265.8 124 100.0
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 3.8e-29 131.7 132 56.8
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 8.8e-26 120.6 143 54.5
CsaV3_6G044310 Cucumis sativus L. HOM05D005317 ORTHO05D005146 4.1e-15 85.1 135 47.4
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 7.2e-12 74.3 103 43.7
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 6.1e-11 71.2 148 37.8
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 4.0e-10 68.6 151 37.1
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 5.2e-10 68.2 156 37.2
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.4e-09 65.1 97 45.4
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 5.7e-09 64.7 141 36.9
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.5e-09 64.3 145 35.9
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.5e-09 64.3 145 35.9
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 7.5e-09 64.3 108 40.7
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.2e-08 62.8 148 36.5
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 2.2e-08 62.8 99 42.4
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 2.8e-08 62.4 76 47.4
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.9e-08 61.6 70 50.0
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 1.1e-07 60.5 123 39.0
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.1e-07 60.5 78 50.0
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-07 60.1 138 39.1
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.4e-07 60.1 153 34.6
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.1e-07 58.9 138 36.2
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.1e-07 58.5 70 48.6
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 5.4e-07 58.2 79 49.4
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 9.2e-07 57.4 97 39.2
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 9.2e-07 57.4 143 39.9
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.6e-06 56.6 78 44.9
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-06 56.6 137 30.7
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 1.6e-06 56.6 117 41.9
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 2.0e-06 56.2 146 36.3
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.0e-06 56.2 108 36.1
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 2.7e-06 55.8 82 43.9
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 2.7e-06 55.8 80 47.5
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 2.7e-06 55.8 120 35.0
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 3.5e-06 55.5 151 34.4
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 5.9e-06 54.7 79 41.8
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 5.9e-06 54.7 82 45.1
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 7.7e-06 54.3 92 40.2
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 7.7e-06 54.3 157 36.9
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 7.7e-06 54.3 165 34.5


User provided reference genes

Program Settings