Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025679 Sechium edule HOM05D005660 ORTHO05D006954 9.3e-113 410.2 208 100.0
Sed0025711 Sechium edule HOM05D005660 ORTHO05D006954 2.1e-80 302.8 209 73.7
CsaV3_1G006460 Cucumis sativus L. HOM05D005660 ORTHO05D006954 9.4e-73 277.3 210 69.5
MELO3C002072.2 Cucumis melo HOM05D005660 ORTHO05D006954 8.8e-71 270.8 211 69.2
CAN.G438.109 Capsicum annuum HOM05D005660 ORTHO05D006954 3.4e-62 242.3 209 59.8
QL10p023157 Quercus lobata HOM05D005660 ORTHO05D006954 1.6e-59 233.4 210 60.0
Peaxi162Scf00015g00624 Petunia axillaris HOM05D005660 ORTHO05D006954 2.3e-58 229.6 211 56.4
CANSAT80G1116 Cannabis sativa HOM05D005660 ORTHO05D006954 6.6e-58 228.0 210 57.1
Nitab4.5_0003716g0100 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.9e-57 226.5 210 56.7
Duzib068G0469 Durio zibethinus HOM05D005660 ORTHO05D006954 2.5e-57 226.1 209 55.5
Solyc03g119840.3 Solanum lycopersicum HOM05D005660 ORTHO05D006954 4.3e-57 225.3 207 57.0
CiPaw.16G083200 Carya illinoinensis HOM05D005660 ORTHO05D006954 2.1e-56 223.0 209 57.4
Dinv36893 Davidia involucrata HOM05D005660 ORTHO05D006954 2.1e-56 223.0 208 58.2
FvH4_5g12810 Fragaria vesca HOM05D005660 ORTHO05D006954 3.6e-56 222.2 210 56.2
Manes.05G117900 Manihot esculenta HOM05D005660 ORTHO05D006954 6.1e-56 221.5 212 56.6
RcHm_v2.0_Chr7g0184421 Rosa chinensis HOM05D005660 ORTHO05D006954 6.1e-56 221.5 210 55.7
FAN18G2100 Fragaria x ananassa HOM05D005660 ORTHO05D006954 8.0e-56 221.1 210 56.2
Lj5C141T17 Lonicera japonica HOM05D005660 ORTHO05D006954 8.0e-56 221.1 211 54.5
FAN08G1036 Fragaria x ananassa HOM05D005660 ORTHO05D006954 1.0e-55 220.7 210 55.7
PGR083G1435 Punica granatum HOM05D005660 ORTHO05D006954 1.0e-55 220.7 219 56.2
FAN18G0270 Fragaria x ananassa HOM05D005660 ORTHO05D006954 1.4e-55 220.3 210 56.2
Atru.chr9.733 Acer truncatum HOM05D005660 ORTHO05D006954 1.8e-55 219.9 209 56.9
COL.COLO4_38430 Corchorus olitorius HOM05D005660 ORTHO05D006954 5.2e-55 218.4 207 56.0
Glyma.04G145600 Glycine max HOM05D005660 ORTHO05D006954 5.2e-55 218.4 208 56.2
Eucgr.B00688 Eucalyptus grandis HOM05D005660 ORTHO05D006954 1.5e-54 216.9 209 54.5
Glyma.06G209600 Glycine max HOM05D005660 ORTHO05D006954 2.6e-54 216.1 208 55.3
CSS0007003 Camellia sinensis var. sinensis HOM05D005660 ORTHO05D006954 5.8e-54 214.9 208 54.8
Prupe.5G216100 Prunus persica HOM05D005660 ORTHO05D006954 9.8e-54 214.2 211 55.0
Thecc.03G027100 Theobroma cacao HOM05D005660 ORTHO05D006954 9.8e-54 214.2 208 56.2
Lj1g0000047 Lotus japonicus HOM05D005660 ORTHO05D006954 1.3e-53 213.8 209 55.0
Ciclev10022237m.g Citrus clementina HOM05D005660 ORTHO05D006954 1.7e-53 213.4 212 54.7
arahy.Tifrunner.gnm1.ann1.IPQJ9D Arachis hypogaea HOM05D005660 ORTHO05D006954 4.9e-53 211.8 207 50.2
ECA247G3454 Erigeron canadensis HOM05D005660 ORTHO05D006954 4.9e-53 211.8 211 53.6
Manes.01G021600 Manihot esculenta HOM05D005660 ORTHO05D006954 4.9e-53 211.8 209 54.5
Oeu016162.1 Olea europaea HOM05D005660 ORTHO05D006954 4.9e-53 211.8 201 57.2
VMungo1309G1625 Vigna mungo HOM05D005660 ORTHO05D006954 4.9e-53 211.8 210 54.8
Potri.012G059100 Populus trichocarpa HOM05D005660 ORTHO05D006954 6.4e-53 211.5 213 55.4
Lalb_Chr07g0178541 Lupinus albus HOM05D005660 ORTHO05D006954 1.1e-52 210.7 207 53.1
CiPaw.15G125200 Carya illinoinensis HOM05D005660 ORTHO05D006954 1.4e-52 210.3 214 54.7
ClCG04G011310 Citrullus lanatus HOM05D005660 ORTHO05D006954 1.4e-52 210.3 136 79.4
Lsat_1_v5_gn_1_15860 Lactuca sativa HOM05D005660 ORTHO05D006954 1.4e-52 210.3 211 52.6
Cc04_g07620 Coffea canephora HOM05D005660 ORTHO05D006954 1.9e-52 209.9 207 53.6
HanXRQChr02g0042751 Helianthus annuus HOM05D005660 ORTHO05D006954 3.2e-52 209.1 212 53.3
TWI81G0064 Tripterygium wilfordii HOM05D005660 ORTHO05D006954 3.2e-52 209.1 209 53.6
arahy.Tifrunner.gnm1.ann1.18T8HP Arachis hypogaea HOM05D005660 ORTHO05D006954 5.4e-52 208.4 212 53.3
arahy.Tifrunner.gnm1.ann1.YK8N2P Arachis hypogaea HOM05D005660 ORTHO05D006954 1.2e-51 207.2 206 50.0
Glyma.05G014100 Glycine max HOM05D005660 ORTHO05D006954 1.2e-51 207.2 207 53.1
Gohir.A12G265100 Gossypium hirsutum HOM05D005660 ORTHO05D006954 1.2e-51 207.2 207 51.7
PGSC0003DMG400004073 Solanum tuberosum HOM05D005660 ORTHO05D006954 1.6e-51 206.8 207 52.2
EL10Ac5g11240 Beta vulgaris HOM05D005660 ORTHO05D006954 2.0e-51 206.5 211 49.3
Gohir.D12G265300 Gossypium hirsutum HOM05D005660 ORTHO05D006954 3.5e-51 205.7 207 50.7
Migut.K00381 Erythranthe guttata HOM05D005660 ORTHO05D006954 6.0e-51 204.9 202 53.0
Haze_18590 Corylus avellana HOM05D005660 ORTHO05D006954 1.3e-50 203.8 181 59.7
MD06G1209900 Malus domestica HOM05D005660 ORTHO05D006954 1.3e-50 203.8 217 50.7
Gorai.008G285000 Gossypium raimondii HOM05D005660 ORTHO05D006954 1.7e-50 203.4 237 46.0
Lj4g0015648 Lotus japonicus HOM05D005660 ORTHO05D006954 2.3e-50 203.0 207 52.2
Medtr2g055760 Medicago truncatula HOM05D005660 ORTHO05D006954 2.3e-50 203.0 213 52.1
Haze_18589 Corylus avellana HOM05D005660 ORTHO05D006954 3.0e-50 202.6 181 59.1
HanXRQChr04g0105941 Helianthus annuus HOM05D005660 ORTHO05D006954 3.9e-50 202.2 205 51.2
Nn3g17686 Nelumbo nucifera HOM05D005660 ORTHO05D006954 3.9e-50 202.2 205 52.7
Hund09993 Selenicereus undatus HOM05D005660 ORTHO05D006954 3.9e-50 202.2 217 48.8
Glyma.17G122400 Glycine max HOM05D005660 ORTHO05D006954 1.1e-49 200.7 207 52.2
Psat1g025680 Pisum sativum HOM05D005660 ORTHO05D006954 1.1e-49 200.7 210 51.4
Actinidia39803 Actinidia chinensis HOM05D005660 ORTHO05D006954 1.5e-49 200.3 211 52.1
MSTRG.9561 Avicennia marina HOM05D005660 ORTHO05D006954 1.5e-49 200.3 196 56.1
Cfa019836 Carpinus fangiana HOM05D005660 ORTHO05D006954 1.9e-49 199.9 176 60.2
MD14G1220800 Malus domestica HOM05D005660 ORTHO05D006954 4.3e-49 198.7 217 50.2
Ah.11g047200 Amaranthus hybridus HOM05D005660 ORTHO05D006954 2.1e-48 196.4 222 46.4
Nitab4.5_0001432g0090 Nicotiana tabacum HOM05D005660 ORTHO05D006954 2.8e-48 196.1 214 50.5
SalBow2G0395 Salvia bowleyana HOM05D005660 ORTHO05D006954 4.7e-48 195.3 201 51.7
Nitab4.5_0000410g0170 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.4e-47 193.7 177 58.8
Aqoxy3G03878 Aquilegia oxysepala HOM05D005660 ORTHO05D006954 2.3e-47 193.0 207 49.8
Nitab4.5_0010134g0010 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.5e-46 190.3 208 51.0
Phvul.003G178300 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 5.8e-46 188.3 220 46.8
Carub.0001s3813 Capsella rubella HOM05D005660 ORTHO05D006954 1.4e-44 183.7 211 48.3
Sopen06g026530 Solanum pennellii HOM05D005660 ORTHO05D006954 1.4e-44 183.7 207 49.8
BcaB04g17376 Brassica carinata HOM05D005660 ORTHO05D006954 2.4e-44 183.0 209 48.3
Oeu027136.1 Olea europaea HOM05D005660 ORTHO05D006954 3.2e-44 182.6 176 56.2
CARHR038970 Cardamine hirsuta HOM05D005660 ORTHO05D006954 4.1e-44 182.2 214 46.7
AL1G55790 Arabidopsis lyrata HOM05D005660 ORTHO05D006954 7.0e-44 181.4 211 47.9
Cpa.g.c34045 Carica papaya HOM05D005660 ORTHO05D006954 1.2e-43 180.6 177 54.2
AT1G48960 Arabidopsis thaliana HOM05D005660 ORTHO05D006954 2.1e-43 179.9 211 47.4
Sp1g35870 Schrenkiella parvula HOM05D005660 ORTHO05D006954 3.5e-43 179.1 210 46.2
TAR629G1816 Trochodendron aralioides HOM05D005660 ORTHO05D006954 1.0e-42 177.6 199 47.7
Thhalv10011768m.g Eutrema salsugineum HOM05D005660 ORTHO05D006954 1.7e-42 176.8 209 47.4
C08p04550 Brassica napus HOM05D005660 ORTHO05D006954 3.9e-42 175.6 210 45.7
BolC8t47259H Brassica oleracea HOM05D005660 ORTHO05D006954 3.9e-42 175.6 210 45.7
arahy.Tifrunner.gnm1.ann1.K4DBIV Arachis hypogaea HOM05D005660 ORTHO05D006954 5.1e-42 175.3 184 53.8
A08p04280 Brassica napus HOM05D005660 ORTHO05D006954 5.1e-42 175.3 211 45.5
BraA06t23613Z Brassica rapa HOM05D005660 ORTHO05D006954 5.1e-42 175.3 208 45.7
TPR.G27758 Trifolium pratense HOM05D005660 ORTHO05D006954 5.1e-42 175.3 192 51.6
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 6.6e-42 174.9 174 52.9
BcaC07g37091 Brassica carinata HOM05D005660 ORTHO05D006954 6.6e-42 174.9 210 45.7
Ca_02656_v3 Cicer arietinum L. HOM05D005660 ORTHO05D006954 8.6e-42 174.5 180 53.9
BcaNung05017 Brassica carinata HOM05D005660 ORTHO05D006954 1.1e-41 174.1 209 45.0
C06p03690 Brassica napus HOM05D005660 ORTHO05D006954 1.1e-41 174.1 209 45.0
BolC6t35508H Brassica oleracea HOM05D005660 ORTHO05D006954 1.1e-41 174.1 209 45.0
PSO063G2916 Papaver somniferum HOM05D005660 ORTHO05D006954 1.5e-41 173.7 213 47.9
A06p04080 Brassica napus HOM05D005660 ORTHO05D006954 2.5e-41 172.9 207 45.4
vmacro17684 Vaccinium macrocarpon HOM05D005660 ORTHO05D006954 7.3e-41 171.4 142 60.6
BcaC08g43100 Brassica carinata HOM05D005660 ORTHO05D006954 1.6e-40 170.2 209 44.5
Aa31LG10G4970 Aethionema arabicum HOM05D005660 ORTHO05D006954 1.1e-39 167.5 210 45.2
AUR62032180 Chenopodium quinoa HOM05D005660 ORTHO05D006954 2.3e-39 166.4 184 46.2
Peaxi162Scf00013g00938 Petunia axillaris HOM05D005660 ORTHO05D006954 2.3e-39 166.4 209 46.4
VMungo1215G2351 Vigna mungo HOM05D005660 ORTHO05D006954 4.0e-39 165.6 288 38.5
PSO782G0127 Papaver somniferum HOM05D005660 ORTHO05D006954 6.8e-39 164.9 213 46.5
DCAR_011337 Daucus carota HOM05D005660 ORTHO05D006954 1.2e-38 164.1 178 53.4
TAR622G0544 Trochodendron aralioides HOM05D005660 ORTHO05D006954 4.4e-38 162.2 140 60.7
BraA08t32455Z Brassica rapa HOM05D005660 ORTHO05D006954 5.8e-38 161.8 211 43.6
Sc12g0006810 Simmondsia chinensis HOM05D005660 ORTHO05D006954 1.1e-36 157.5 193 43.5
THA.LOC104820410 Tarenaya hassleriana HOM05D005660 ORTHO05D006954 1.4e-36 157.1 234 39.7
GSVIVG01008223001 Vitis vinifera HOM05D005660 ORTHO05D006954 2.7e-35 152.9 209 43.5
Rhsim08G0138400 Rhododendron simsii HOM05D005660 ORTHO05D006954 3.3e-33 146.0 127 58.3
MBI16_g23748_MAGBIO Magnolia biondii HOM05D005660 ORTHO05D006954 5.6e-33 145.2 172 48.8
Duzib084G1344 Durio zibethinus HOM05D005660 ORTHO05D006954 1.6e-32 143.7 205 43.4
Sabra12G0040900 Salix brachista HOM05D005660 ORTHO05D006954 1.4e-31 140.6 121 62.8
Cpa.g.sc13.65 Carica papaya HOM05D005660 ORTHO05D006954 4.0e-31 139.0 118 61.0
CAN.G587.76 Capsicum annuum HOM05D005660 ORTHO05D006954 2.6e-30 136.3 117 56.4
HPP92_011590 Vanilla planifolia HOM05D005660 ORTHO05D006954 2.6e-30 136.3 138 52.2
Nn4g23692 Nelumbo nucifera HOM05D005660 ORTHO05D006954 4.4e-30 135.6 118 60.2
Phvul.009G201000 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 2.2e-29 133.3 146 50.0
Lalb_Chr13g0302411 Lupinus albus HOM05D005660 ORTHO05D006954 6.4e-29 131.7 119 56.3
ATR0598G023 Amborella trichopoda HOM05D005660 ORTHO05D006954 1.9e-28 130.2 156 49.4
AUR62036940 Chenopodium quinoa HOM05D005660 ORTHO05D006954 9.2e-28 127.9 122 51.6
Zm00001eb126330 Zea mays HOM05D005660 ORTHO05D006954 9.6e-25 117.9 118 55.9
Sopen03g038700 Solanum pennellii HOM05D005660 ORTHO05D006954 1.6e-24 117.1 112 56.2
SEGI_40774 Sequoiadendron giganteum HOM05D005660 ORTHO05D006954 2.4e-23 113.2 167 42.5
AagrBONN_evm.TU.Sc2ySwM_362.1267 Anthoceros agrestis HOM05D005660 ORTHO05D006954 2.5e-17 93.2 172 36.0
FAN13G2173 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.1e-15 86.3 98 50.0
CDE07G0562 Ceratophyllum demersum HOM05D005660 ORTHO05D006954 1.5e-14 84.0 168 33.9
PGSC0003DMG400005618 Solanum tuberosum HOM05D005660 ORTHO05D006954 5.8e-14 82.0 79 58.2
Lalb_Chr13g0302401 Lupinus albus HOM05D005660 ORTHO05D006954 2.9e-13 79.7 91 42.9
Sabra12G0040800 Salix brachista HOM05D005660 ORTHO05D006954 5.1e-10 68.9 95 40.0
Solyc06g069270.1 Solanum lycopersicum HOM05D005660 ORTHO05D006954 1.5e-09 67.4 53 58.5
Lj2g0027117 Lotus japonicus HOM05D001012 ORTHO05D002597 2.1e-08 63.5 125 32.8
Mapoly0056s0094 Marchantia polymorpha HOM05D001012 ORTHO05D004721 3.7e-08 62.8 156 28.8
Medtr5g047050 Medicago truncatula HOM05D001012 ORTHO05D002597 4.8e-08 62.4 125 32.8
TPR.G38561 Trifolium pratense HOM05D001012 ORTHO05D002597 4.8e-08 62.4 124 32.3
Ca_05056_v3 Cicer arietinum L. HOM05D001012 ORTHO05D002597 1.8e-07 60.5 121 31.4
Psat2g093600 Pisum sativum HOM05D001012 ORTHO05D002597 1.8e-07 60.5 122 32.0
RcHm_v2.0_Chr4g0434591 Rosa chinensis HOM05D005660 ORTHO05D006954 1.8e-07 60.5 40 67.5
RcHm_v2.0_Chr5g0042351 Rosa chinensis HOM05D005660 ORTHO05D006954 1.8e-07 60.5 40 67.5
SMO145G0122 Selaginella moellendorffii HOM05D001012 ORTHO05D002597 1.8e-07 60.5 120 33.3
PGR119G0423 Punica granatum HOM05D001012 ORTHO05D002597 1.2e-06 57.8 128 28.1
Hund27022 Selenicereus undatus HOM05D001012 ORTHO05D004721 1.2e-06 57.8 107 31.8
Glyma.02G121800 Glycine max HOM05D001012 ORTHO05D002597 1.5e-06 57.4 122 30.3
Gohir.A02G073300 Gossypium hirsutum HOM05D001012 ORTHO05D004721 1.5e-06 57.4 116 32.8
Lalb_Chr10g0099111 Lupinus albus HOM05D001012 ORTHO05D002597 1.5e-06 57.4 120 26.7
TWI60G0495 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 2.0e-06 57.0 117 30.8
TWI60G1118 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 2.0e-06 57.0 117 30.8
Lalb_Chr13g0302711 Lupinus albus HOM05D001012 ORTHO05D002597 2.6e-06 56.6 116 31.0
MBI09_g45357_MAGBIO Magnolia biondii HOM05D001012 ORTHO05D004721 2.6e-06 56.6 117 29.9
Phvul.003G182600 Phaseolus vulgaris HOM05D001012 ORTHO05D002597 2.6e-06 56.6 114 33.3
SMO367G0084 Selaginella moellendorffii HOM05D001012 ORTHO05D004721 2.6e-06 56.6 113 31.9
Aqoxy3G00542 Aquilegia oxysepala HOM05D001012 ORTHO05D002597 4.5e-06 55.8 118 28.0
Aqoxy3G03718 Aquilegia oxysepala HOM05D001012 ORTHO05D002597 4.5e-06 55.8 119 30.3
Gohir.D02G080600 Gossypium hirsutum HOM05D001012 ORTHO05D004721 4.5e-06 55.8 116 32.8
Gorai.010G049900 Gossypium raimondii HOM05D001012 ORTHO05D004721 4.5e-06 55.8 111 34.2
Actinidia10447 Actinidia chinensis HOM05D001012 ORTHO05D002597 5.8e-06 55.5 146 30.1
CDE10G0510 Ceratophyllum demersum HOM05D001012 ORTHO05D002597 7.6e-06 55.1 120 26.7
Gorai.005G090000 Gossypium raimondii HOM05D001012 ORTHO05D004721 7.6e-06 55.1 104 34.6
Medtr4g109880 Medicago truncatula HOM05D001012 ORTHO05D002597 7.6e-06 55.1 113 32.7
Solyc06g060360.3 Solanum lycopersicum HOM05D001012 ORTHO05D004721 7.6e-06 55.1 152 27.0
PGSC0003DMG400017558 Solanum tuberosum HOM05D001012 ORTHO05D004721 7.6e-06 55.1 152 27.0
arahy.Tifrunner.gnm1.ann1.QD4C18 Arachis hypogaea HOM05D001012 ORTHO05D002597 9.9e-06 54.7 124 33.1
arahy.Tifrunner.gnm1.ann1.WE17ZA Arachis hypogaea HOM05D001012 ORTHO05D002597 9.9e-06 54.7 124 33.1
SMO139G0062 Selaginella moellendorffii HOM05D001012 ORTHO05D004721 9.9e-06 54.7 112 31.2
TWI81G0138 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 9.9e-06 54.7 118 28.8


User provided reference genes

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