Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 9.5e-65 250.0 123 100.0
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 9.7e-25 117.1 85 69.4
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.3e-18 95.9 62 67.7
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 3.0e-18 95.5 67 62.7
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 3.9e-18 95.1 62 66.1
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.7e-18 94.4 65 63.1
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.7e-18 94.4 65 63.1
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.1e-17 93.6 62 67.7
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.3e-17 91.7 62 64.5
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 5.7e-17 91.3 93 46.2
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 5.7e-17 91.3 62 62.9
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 5.7e-17 91.3 62 62.9
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 7.4e-17 90.9 62 62.9
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 7.4e-17 90.9 62 64.5
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 9.7e-17 90.5 88 51.1
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 9.7e-17 90.5 64 64.1
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 9.7e-17 90.5 65 63.1
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 1.7e-16 89.7 62 62.9
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.7e-16 89.7 62 66.1
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 1.7e-16 89.7 126 42.9
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.2e-16 89.4 62 62.9
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.2e-16 89.4 63 61.9
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 2.2e-16 89.4 62 62.9
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.8e-16 89.0 64 64.1
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 2.8e-16 89.0 64 57.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 2.8e-16 89.0 62 61.3
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.7e-16 88.6 67 56.7
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.7e-16 88.6 67 56.7
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 3.7e-16 88.6 97 51.5
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.7e-16 88.6 70 60.0
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 6.3e-16 87.8 64 62.5
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 8.2e-16 87.4 67 56.7
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 8.2e-16 87.4 62 62.9
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 8.2e-16 87.4 62 62.9
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 8.2e-16 87.4 62 62.9
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 8.2e-16 87.4 64 62.5
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 8.2e-16 87.4 62 58.1
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.4e-15 86.7 64 56.2
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.4e-15 86.7 64 64.1
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.8e-15 86.3 64 54.7
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 1.8e-15 86.3 67 56.7
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.8e-15 86.3 64 54.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.8e-15 86.3 62 62.9
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.8e-15 86.3 64 54.7
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 2.4e-15 85.9 98 40.8
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.4e-15 85.9 62 62.9
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.4e-15 85.9 82 51.2
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.4e-15 85.9 64 59.4
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 2.4e-15 85.9 93 44.1
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 2.4e-15 85.9 93 44.1
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.4e-15 85.9 75 50.7
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 3.1e-15 85.5 69 52.2
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.1e-15 85.5 62 61.3
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.1e-15 85.5 67 53.7
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 4.1e-15 85.1 62 62.9
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 5.3e-15 84.7 65 60.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 5.3e-15 84.7 64 54.7
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 5.3e-15 84.7 64 54.7
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 5.3e-15 84.7 64 53.1
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 5.3e-15 84.7 82 51.2
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 5.3e-15 84.7 75 49.3
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 6.9e-15 84.3 67 53.7
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 6.9e-15 84.3 62 62.9
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 9.1e-15 84.0 62 61.3
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 9.1e-15 84.0 67 56.7
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.2e-14 83.6 64 57.8
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.5e-14 83.2 89 44.9
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.0e-14 82.8 78 46.2
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 2.0e-14 82.8 64 59.4
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 2.0e-14 82.8 92 51.1
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 4.5e-14 81.6 64 53.1
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.5e-14 81.6 64 53.1
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 5.9e-14 81.3 83 48.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.0e-13 80.5 67 52.2
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.0e-13 80.5 62 56.5
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.3e-13 80.1 64 53.1
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 2.9e-13 79.0 62 56.5
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 3.8e-13 78.6 62 59.7
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.1e-12 77.0 55 63.6
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.4e-12 76.6 64 53.1
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.9e-12 76.3 64 54.7
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.9e-12 76.3 65 50.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 4.2e-12 75.1 62 54.8
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 4.7e-11 71.6 50 66.0
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 3.0e-10 68.9 50 62.0
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.5e-09 66.6 35 77.1
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 6.3e-08 61.2 63 46.0
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.1e-07 60.5 62 45.2
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 9.1e-07 57.4 67 46.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 3.4e-06 55.5 60 43.3


User provided reference genes

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