Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 5.5e-147 524.2 257 100.0
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 4.8e-143 511.1 257 96.5
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.0e-129 466.8 257 88.3
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 87.2
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 87.2
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 5.3e-126 454.5 255 86.7
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 5.3e-126 454.5 255 86.7
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 2.6e-125 452.2 257 83.7
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 2.6e-125 452.2 257 84.4
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 4.5e-125 451.4 257 84.4
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 5.9e-125 451.1 257 85.6
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 7.7e-125 450.7 257 84.0
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.0e-124 450.3 257 85.6
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.7e-124 449.5 255 84.7
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 2.2e-124 449.1 255 85.9
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 2.2e-124 449.1 255 84.7
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 83.7
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.2e-123 445.3 257 83.7
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 3.2e-123 445.3 257 82.5
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 3.2e-123 445.3 255 83.1
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 3.2e-123 445.3 257 82.5
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 3.2e-123 445.3 255 82.7
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 3.2e-123 445.3 255 82.7
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 4.2e-123 444.9 255 82.7
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 4.2e-123 444.9 257 83.7
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 84.0
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 82.9
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 82.1
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.1e-122 442.6 255 82.4
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.1e-122 442.6 255 82.4
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 2.7e-122 442.2 257 83.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.5
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 82.1
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 6.1e-122 441.0 257 82.1
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.0e-121 440.3 257 81.3
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.8e-121 439.5 255 82.4
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 5.2e-121 438.0 257 82.9
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.2e-121 438.0 257 82.9
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.2e-121 438.0 257 82.9
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 5.2e-121 438.0 257 82.1
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 2.0e-120 436.0 255 83.5
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 82.5
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 7.5e-120 434.1 257 80.9
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 81.3
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 80.9
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.7e-119 433.0 258 81.4
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 2.8e-119 432.2 257 80.2
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 3.7e-119 431.8 265 79.2
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 3.7e-119 431.8 254 82.7
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 4.8e-119 431.4 257 81.3
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 8.2e-119 430.6 257 81.3
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 8.2e-119 430.6 254 82.7
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 79.4
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 80.9
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.4e-118 429.1 257 80.9
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 9.1e-118 427.2 258 81.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 81.3
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 4.5e-117 424.9 255 79.2
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 4.5e-117 424.9 257 83.7
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 5.9e-117 424.5 255 79.6
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 5.9e-117 424.5 263 79.1
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.3e-116 423.3 254 78.0
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.3e-116 423.3 300 70.0
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.9e-116 422.2 271 75.6
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.9e-116 422.2 256 77.3
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.9e-116 422.2 255 79.2
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.9e-116 422.2 255 79.2
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 3.8e-116 421.8 255 78.4
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 8.5e-116 420.6 271 75.3
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.9e-115 419.5 255 78.0
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.9e-115 419.5 255 78.0
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 3.2e-115 418.7 257 79.4
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 3.2e-115 418.7 257 79.4
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 3.2e-115 418.7 257 79.4
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 3.2e-115 418.7 257 79.4
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 5.5e-115 417.9 257 78.2
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 7.2e-115 417.5 255 78.8
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.2e-114 416.8 255 77.3
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.2e-114 416.8 257 77.0
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 4.0e-113 411.8 255 76.5
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.2e-112 410.2 256 76.2
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.5e-112 409.8 257 77.4
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 4.4e-112 408.3 257 80.2
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 4.4e-112 408.3 256 75.8
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 5.9e-109 397.9 252 75.8
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 5.0e-108 394.8 230 82.6
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.5e-107 393.3 254 74.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 1.0e-105 387.1 257 72.8
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 3.4e-104 382.1 281 69.8
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.3e-103 380.2 250 72.8
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.2e-101 373.6 214 81.3
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 5.0e-100 368.2 257 72.4
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.6e-98 363.2 231 74.9
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 4.0e-97 358.6 213 78.9
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.2e-96 357.1 223 77.1
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 1.4e-94 350.1 255 67.1
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 3.9e-92 342.0 247 68.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 2.5e-91 339.3 251 67.7
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 8.9e-89 330.9 250 65.6
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.2e-87 326.2 198 78.8
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 3.7e-87 325.5 203 74.9
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 8.3e-87 324.3 251 65.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 8.1e-74 281.2 168 78.6
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.6e-66 256.9 153 79.1
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.6e-66 256.9 170 70.6
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 2.1e-61 240.0 132 84.8
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.1e-61 240.0 254 50.0
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 6.6e-60 235.0 142 79.6
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 2.5e-59 233.0 248 48.0
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 2.4e-54 216.5 198 60.1
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 8.7e-52 208.0 130 78.5
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.8e-50 203.0 112 86.6
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.1e-49 201.1 116 75.9
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.4e-49 199.9 272 41.9
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 7.6e-48 194.9 105 88.6
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 6.4e-47 191.8 156 60.9
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.1e-45 186.8 105 82.9
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 6.0e-45 185.3 114 79.8
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 8.7e-44 181.4 257 45.1
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.4e-41 174.1 105 79.0
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 5.3e-41 172.2 105 78.1
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 7.1e-38 161.8 104 78.8
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 4.5e-32 142.5 91 68.1
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.9e-31 139.8 117 62.4
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 6.7e-28 128.6 67 91.0
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.2e-22 109.8 102 55.9
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.2e-21 107.8 96 56.2
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 6.1e-21 105.5 60 86.7
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 9.4e-14 81.6 55 70.9
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 3.6e-13 79.7 60 66.7
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 2.0e-08 63.9 40 77.5


User provided reference genes

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