Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 4.6e-86 321.2 167 100.0
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 7.6e-65 250.8 167 80.2
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 4.9e-64 248.1 167 80.2
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 1.1e-63 246.9 167 80.2
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 4.6e-46 188.3 153 69.9
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.8e-45 186.4 167 62.9
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 8.7e-45 184.1 156 65.4
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 5.7e-44 181.4 162 62.3
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 5.7e-44 181.4 158 65.2
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.3e-43 180.3 171 60.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.6e-43 179.9 166 62.0
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 3.7e-43 178.7 166 59.6
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.7e-43 178.7 120 77.5
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 6.3e-43 177.9 120 76.7
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 6.9e-42 174.5 122 73.0
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.6e-41 172.6 120 71.7
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 5.9e-41 171.4 120 71.7
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 7.6e-41 171.0 121 71.9
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 7.6e-41 171.0 120 72.5
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.0e-40 170.6 120 72.5
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.0e-40 170.6 119 72.3
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.3e-40 170.2 165 58.8
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.3e-40 170.2 119 72.3
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.7e-40 169.9 129 70.5
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.7e-40 169.9 124 68.5
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 3.8e-40 168.7 120 70.8
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.5e-40 167.5 120 69.2
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.1e-39 167.2 119 70.6
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.4e-39 166.8 130 69.2
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.9e-39 166.4 119 69.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.9e-39 166.4 170 58.2
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 2.5e-39 166.0 120 67.5
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 3.2e-39 165.6 119 70.6
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 7.2e-39 164.5 117 70.1
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 9.3e-39 164.1 166 57.8
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 9.3e-39 164.1 149 61.1
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 9.3e-39 164.1 123 65.9
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.2e-38 163.7 168 59.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.1e-38 162.9 166 57.2
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.1e-38 162.9 166 57.2
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.1e-38 162.9 166 57.2
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.7e-38 162.5 117 70.9
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.7e-38 162.5 168 59.5
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.7e-38 162.5 128 65.6
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 3.6e-38 162.2 125 68.0
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 6.1e-38 161.4 123 65.0
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 7.9e-38 161.0 166 56.6
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 7.9e-38 161.0 166 56.6
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 7.9e-38 161.0 166 55.4
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.0e-37 160.6 120 67.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.0e-37 160.6 125 67.2
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 5.1e-37 158.3 134 61.9
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 5.1e-37 158.3 119 68.9
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.1e-37 158.3 118 66.9
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 6.7e-37 157.9 167 52.7
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.1e-36 157.1 136 64.7
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.1e-36 157.1 120 70.8
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.1e-36 157.1 122 64.8
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.1e-36 157.1 120 65.8
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.5e-36 156.8 119 68.9
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.5e-36 156.8 182 51.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.9e-36 156.4 118 68.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 3.3e-36 155.6 136 64.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 7.4e-36 154.5 139 60.4
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 1.3e-35 153.7 113 69.9
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.7e-35 153.3 163 55.2
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 2.8e-35 152.5 127 66.9
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 2.8e-35 152.5 172 51.2
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 3.7e-35 152.1 119 63.9
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 8.2e-35 151.0 127 66.1
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 3.1e-34 149.1 119 63.0
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 3.1e-34 149.1 101 71.3
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 9.1e-34 147.5 123 65.0
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 4.5e-33 145.2 164 51.8
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 5.0e-32 141.7 119 62.2
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 9.4e-31 137.5 120 62.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.7e-30 136.0 95 69.5
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.6e-30 135.6 116 60.3
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 5.1e-29 131.7 130 58.5
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 6.7e-29 131.3 94 74.5
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.6e-28 129.4 120 56.7
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 9.7e-28 127.5 95 69.5
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 8.2e-27 124.4 126 56.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.8e-26 123.2 95 70.5
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.8e-26 123.2 100 65.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.4e-25 119.0 114 57.0
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.0e-24 117.5 135 53.3
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.7e-24 116.7 90 68.9
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.2e-24 116.3 105 60.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 2.5e-23 112.8 118 55.1
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 7.2e-23 111.3 90 63.3
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 3.6e-22 109.0 125 45.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 8.0e-22 107.8 71 64.8
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.9e-21 105.5 132 45.5
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 2.8e-19 99.4 121 45.5
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.4e-18 97.1 198 39.4
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 4.5e-17 92.0 115 45.2
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 9.4e-15 84.3 120 41.7
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 8.0e-14 81.3 61 68.9
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.3e-13 79.7 119 39.5
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.3e-13 79.7 119 39.5
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.2e-12 77.4 109 45.9
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.2e-12 77.4 120 38.3
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 9.1e-10 67.8 116 40.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 6.5e-08 61.6 124 37.1


User provided reference genes

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