Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 7.2e-164 580.5 289 100.0
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 1.4e-130 469.9 312 76.6
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 1.1e-127 460.3 351 70.1
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 1.2e-110 403.7 312 70.2
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 2.9e-104 382.5 290 66.9
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 1.2e-102 377.1 285 67.0
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 3.5e-102 375.6 294 65.3
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 3.5e-102 375.6 290 63.4
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 4.6e-102 375.2 290 63.8
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 2.3e-101 372.9 299 65.6
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.3e-101 372.9 285 66.7
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 1.1e-100 370.5 292 66.1
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 1.1e-100 370.5 290 63.4
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 4.3e-100 368.6 295 66.4
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 5.6e-100 368.2 292 66.8
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 9.6e-100 367.5 298 66.1
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 1.3e-99 367.1 293 64.8
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 1.3e-99 367.1 286 66.4
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 6.2e-99 364.8 258 69.0
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.2e-97 360.5 322 59.6
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 2.0e-97 359.8 295 62.7
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 2.0e-97 359.8 245 67.8
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 4.5e-97 358.6 300 62.7
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 2.9e-96 355.9 299 62.2
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 3.8e-96 355.5 296 61.8
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 1.4e-95 353.6 286 63.6
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 1.9e-95 353.2 296 60.1
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 1.9e-95 353.2 245 68.2
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 2.5e-95 352.8 258 64.3
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 2.5e-95 352.8 290 61.0
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 4.2e-95 352.1 238 68.5
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 4.2e-95 352.1 293 63.5
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 7.1e-95 351.3 292 64.0
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 9.3e-95 350.9 294 60.9
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 9.3e-95 350.9 290 60.3
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 9.3e-95 350.9 281 63.7
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 6.0e-94 348.2 296 59.5
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 6.0e-94 348.2 265 62.6
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 6.0e-94 348.2 281 61.9
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 6.0e-94 348.2 285 62.8
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 3.9e-93 345.5 255 66.7
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 6.7e-93 344.7 298 58.7
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 8.7e-93 344.4 332 56.6
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 1.5e-92 343.6 254 64.2
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 1.9e-92 343.2 239 67.8
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 3.3e-92 342.4 254 64.6
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 5.7e-92 341.7 291 61.9
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 7.4e-92 341.3 289 60.6
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 7.4e-92 341.3 269 62.5
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 7.4e-92 341.3 240 69.6
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 9.7e-92 340.9 291 58.8
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 1.3e-91 340.5 297 61.3
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 1.3e-91 340.5 240 65.8
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 1.6e-91 340.1 282 63.1
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 3.7e-91 339.0 268 63.1
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 3.7e-91 339.0 254 63.4
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 3.7e-91 339.0 254 63.4
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 6.3e-91 338.2 286 60.5
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 6.3e-91 338.2 241 65.6
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 8.2e-91 337.8 295 60.7
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 1.4e-90 337.0 239 70.3
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 3.1e-90 335.9 239 69.5
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 4.1e-90 335.5 318 56.3
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 6.9e-90 334.7 319 54.9
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 9.0e-90 334.3 239 69.0
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 9.0e-90 334.3 239 69.0
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 9.0e-90 334.3 239 69.0
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 9.0e-90 334.3 239 69.0
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 1.2e-89 334.0 296 61.1
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 1.5e-89 333.6 212 73.6
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 3.4e-89 332.4 254 62.2
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 5.9e-89 331.6 262 64.5
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 1.3e-88 330.5 296 58.8
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 1.7e-88 330.1 257 63.0
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 5.0e-88 328.6 279 58.8
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 5.5e-87 325.1 269 61.0
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 7.2e-87 324.7 256 64.5
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 3.6e-86 322.4 269 61.0
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 1.4e-85 320.5 275 57.8
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 1.8e-85 320.1 261 64.0
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 5.1e-85 318.5 214 72.9
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 2.0e-84 316.6 255 63.5
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 2.5e-84 316.2 255 63.5
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.7e-84 315.1 304 55.9
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.4e-82 310.5 268 59.3
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 1.2e-81 307.4 284 55.6
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 2.0e-81 306.6 214 66.4
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 2.2e-80 303.1 292 56.2
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 1.4e-79 300.4 297 57.2
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 1.2e-78 297.4 308 53.9
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 3.6e-78 295.8 296 57.1
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 4.7e-78 295.4 251 58.2
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 1.0e-77 294.3 279 56.3
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 1.8e-77 293.5 232 66.4
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 1.5e-76 290.4 235 63.0
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 4.4e-76 288.9 228 66.2
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 9.7e-76 287.7 245 59.6
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 1.1e-74 284.3 270 58.1
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 1.1e-74 284.3 270 58.1
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 1.1e-74 284.3 270 58.1
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 3.1e-74 282.7 241 58.1
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 7.0e-74 281.6 228 62.3
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 1.2e-73 280.8 264 53.8
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 2.0e-65 253.4 188 68.1
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 7.7e-65 251.5 231 51.9
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 1.7e-64 250.4 212 58.0
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 1.6e-62 243.8 197 62.9
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.4e-61 240.7 212 59.0
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 5.2e-61 238.8 233 52.4
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 1.2e-60 237.7 451 36.6
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 7.5e-60 235.0 229 49.8
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 6.1e-54 215.3 229 49.3
SGA_v2.0_scaffold203G41537 Striga asiatica HOM05D005444 ORTHO05D006773 3.7e-51 206.1 173 60.7
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 8.6e-48 194.9 167 58.7
PGSC0003DMG402030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 8.6e-48 194.9 161 55.9
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 1.7e-43 180.6 135 63.0
Aqoxy1G00926 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 4.3e-39 166.0 150 54.0
DCAR_005353 Daucus carota HOM05D005444 ORTHO05D006773 4.7e-38 162.5 119 62.2
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 1.4e-37 161.0 237 40.5
Zm00001eb355820 Zea mays HOM05D005444 ORTHO05D006773 2.6e-36 156.8 151 49.7
Aqoxy1G00927 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 4.9e-35 152.5 129 63.6
TPR.G3768 Trifolium pratense HOM05D005444 ORTHO05D006773 2.4e-34 150.2 96 71.9
SGA_v2.0_scaffold203G41535 Striga asiatica HOM05D005444 ORTHO05D006773 7.8e-33 145.2 128 64.8
Nn2g13370 Nelumbo nucifera HOM05D005444 ORTHO05D006773 8.0e-30 135.2 79 73.4
unitig_747.g22036 Utricularia gibba HOM05D005444 ORTHO05D006773 8.0e-30 135.2 76 78.9
Ah.15g097630 Amaranthus hybridus HOM05D005444 ORTHO05D006773 4.0e-29 132.9 75 77.3
HanXRQChr06g0167871 Helianthus annuus HOM05D000219 ORTHO05D006773 2.7e-25 120.2 84 69.0
Os05g0110800 Oryza sativa ssp. japonica HOM05D005444 ORTHO05D006773 3.5e-25 119.8 67 85.1
HanXRQChr10g0291051 Helianthus annuus HOM05D005444 ORTHO05D006773 7.8e-25 118.6 77 74.0
HanXRQChr10g0291061 Helianthus annuus HOM05D005444 ORTHO05D006773 7.8e-25 118.6 77 74.0
unitig_747.g22037 Utricularia gibba HOM05D005444 ORTHO05D006773 1.0e-24 118.2 115 50.4
Medtr4g064030 Medicago truncatula HOM05D005444 ORTHO05D006773 1.3e-19 101.3 87 60.9
TPR.G27554 Trifolium pratense HOM05D005444 ORTHO05D006773 1.3e-19 101.3 72 62.5
Psat5g007960 Pisum sativum HOM05D005444 ORTHO05D006773 8.6e-16 88.6 121 45.5
TPR.G27777 Trifolium pratense HOM05D005444 ORTHO05D006773 8.6e-16 88.6 65 67.7
TPR.G376 Trifolium pratense HOM05D025391 ORTHO05D030167 1.2e-14 84.7 41 87.8
COL.COLO4_35627 Corchorus olitorius HOM05D005444 ORTHO05D001950 3.6e-14 83.2 105 43.8
AUR62031662 Chenopodium quinoa HOM05D001050 ORTHO05D001270 1.1e-13 81.6 81 51.9
Psat4g229040 Pisum sativum HOM05D005444 ORTHO05D006773 1.4e-13 81.3 74 56.8
TAR636G2897 Trochodendron aralioides HOM05D005444 ORTHO05D006773 4.0e-13 79.7 80 52.5
Ah.15g097620 Amaranthus hybridus HOM05D005444 ORTHO05D006773 2.6e-12 77.0 44 72.7
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 8.4e-11 72.0 92 46.7
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-10 71.6 185 30.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 7.8e-09 65.5 196 27.0
Phvul.005G077000 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 9.6e-07 58.5 36 63.9
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 2.1e-06 57.4 173 29.5
C03p13750 Brassica napus HOM05D005444 ORTHO05D042479 2.8e-06 57.0 36 69.4
BolC3t13825H Brassica oleracea HOM05D005444 ORTHO05D042479 2.8e-06 57.0 36 69.4
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 6.2e-06 55.8 252 25.4


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