Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 1.0e-288 996.1 545 100.0
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 4.0e-147 525.8 609 60.1
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 6.2e-124 448.7 616 51.3
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 3.4e-122 443.0 632 51.9
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.4e-46 191.8 658 30.4
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.2e-45 188.7 569 35.3
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.0e-45 188.0 658 30.2
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.0e-45 188.0 659 29.7
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 3.4e-45 187.2 748 29.9
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 5.7e-45 186.4 656 32.2
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 7.5e-45 186.0 658 30.2
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.2e-44 184.5 658 30.9
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.9e-44 183.3 658 30.7
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 4.9e-44 183.3 665 28.6
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.8e-43 181.4 750 29.3
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 5.4e-43 179.9 626 30.8
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 5.4e-43 179.9 741 29.8
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 9.2e-43 179.1 707 31.8
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 1.2e-42 178.7 727 30.0
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 5.0e-41 173.3 726 30.4
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 1.1e-40 172.2 703 29.7
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.5e-40 171.8 701 28.8
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 7.3e-40 169.5 677 30.6
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.8e-38 164.9 728 29.5
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 2.3e-38 164.5 673 30.2
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 4.0e-38 163.7 728 29.5
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.2e-37 162.2 593 31.9
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.2e-37 162.2 676 29.7
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 1.2e-37 162.2 717 30.8
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 1.5e-37 161.8 614 31.1
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 2.0e-37 161.4 663 30.3
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 3.4e-37 160.6 746 28.4
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 1.3e-36 158.7 725 28.1
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 1.7e-36 158.3 757 29.3
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 2.2e-36 157.9 704 32.5
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 2.2e-36 157.9 701 29.8
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 2.9e-36 157.5 683 31.6
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 3.7e-36 157.1 756 28.7
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 8.3e-36 156.0 716 29.5
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 1.1e-35 155.6 646 28.9
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 3.2e-35 154.1 738 33.5
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 9.2e-35 152.5 692 31.5
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 1.6e-34 151.8 767 28.7
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 4.6e-34 150.2 648 29.9
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 6.0e-34 149.8 727 29.4
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 7.8e-34 149.4 704 29.7
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 1.0e-33 149.1 625 31.0
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 2.3e-33 147.9 642 28.8
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.9e-32 144.8 774 29.5
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 2.5e-32 144.4 670 27.6
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 2.5e-32 144.4 708 29.7
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 5.6e-32 143.3 755 29.8
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 2.8e-31 141.0 702 29.6
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 3.6e-31 140.6 300 39.3
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 8.0e-31 139.4 723 28.5
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 1.1e-30 139.0 679 28.3
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 1.4e-30 138.7 670 30.3
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.4e-30 138.7 560 30.2
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.8e-30 138.3 615 31.4
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 2.3e-30 137.9 632 26.7
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 3.1e-30 137.5 694 27.2
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 5.2e-30 136.7 686 28.9
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 8.9e-30 136.0 669 27.4
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 8.9e-30 136.0 753 27.2
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.2e-29 135.6 671 28.2
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 1.5e-29 135.2 746 27.6
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 1.5e-29 135.2 666 29.7
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 2.0e-29 134.8 672 27.2
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 2.0e-29 134.8 722 28.8
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 2.6e-29 134.4 692 27.3
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 5.8e-29 133.3 730 28.4
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 5.8e-29 133.3 671 28.0
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 9.8e-29 132.5 727 27.8
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.3e-28 132.1 729 28.4
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 1.7e-28 131.7 739 27.9
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 1.7e-28 131.7 714 28.4
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 2.2e-28 131.3 696 27.6
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 3.7e-28 130.6 642 27.6
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 4.9e-28 130.2 658 27.5
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 4.9e-28 130.2 736 25.8
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.9e-28 130.2 655 27.6
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.9e-28 130.2 563 29.1
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 8.3e-28 129.4 737 27.7
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.9e-27 128.3 576 28.0
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 4.1e-27 127.1 644 28.3
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 7.1e-27 126.3 486 32.7
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 7.1e-27 126.3 660 28.0
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 9.2e-27 125.9 659 27.9
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 6.0e-26 123.2 674 27.7
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.0e-25 122.5 670 28.5
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 1.7e-25 121.7 689 28.4
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.1e-25 120.2 673 27.2
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 1.5e-24 118.6 592 29.4
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 3.3e-24 117.5 536 29.1
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 5.6e-24 116.7 458 33.2
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.6e-23 115.2 682 26.2
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.8e-22 111.7 686 25.9
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 2.3e-22 111.3 700 25.7
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 4.0e-22 110.5 663 25.9
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 5.2e-22 110.2 706 26.8
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.2e-21 109.0 703 26.5
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 1.5e-21 108.6 534 28.7
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 2.0e-21 108.2 742 25.7
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.4e-21 107.5 554 27.1
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 3.4e-21 107.5 705 25.8
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.4e-21 107.5 631 27.3
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 5.8e-21 106.7 527 27.1
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 3.7e-20 104.0 320 33.8
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 3.7e-20 104.0 524 29.0
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 8.3e-20 102.8 620 24.4
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 8.3e-20 102.8 606 28.4
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 1.4e-19 102.1 705 26.4
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 2.4e-19 101.3 689 26.3
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.4e-19 101.3 266 35.0
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 5.4e-19 100.1 437 30.2
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.2e-18 99.0 795 24.0
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 1.6e-18 98.6 392 30.4
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 2.1e-18 98.2 544 25.9
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 6.0e-18 96.7 772 25.9
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 7.8e-18 96.3 610 27.0
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.3e-17 94.7 555 26.5
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 3.9e-17 94.0 322 31.7
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 8.6e-17 92.8 627 24.1
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.6e-17 92.8 383 28.5
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.5e-16 91.3 639 26.1
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 2.5e-16 91.3 602 27.4
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.6e-16 90.1 296 31.8
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 2.1e-15 88.2 317 30.3
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 4.7e-15 87.0 355 30.4
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 2.4e-14 84.7 293 30.4
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 3.1e-14 84.3 339 28.6
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 4.0e-14 84.0 220 35.0
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 4.0e-14 84.0 350 31.1
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 5.2e-14 83.6 339 28.6
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 6.8e-14 83.2 550 24.4
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 8.9e-14 82.8 323 27.9
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.0e-13 81.6 576 26.2
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 4.4e-13 80.5 339 29.5
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 5.8e-13 80.1 315 29.2
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 2.2e-12 78.2 314 29.0
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 2.2e-12 78.2 314 29.0
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 3.8e-12 77.4 589 25.1
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 3.8e-12 77.4 176 37.5
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 6.4e-12 76.6 388 29.9
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 1.1e-11 75.9 489 26.0
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 1.9e-11 75.1 352 29.8
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 1.9e-11 75.1 350 29.7
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 1.9e-11 75.1 350 29.7
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 4.2e-11 73.9 573 25.1
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 4.2e-11 73.9 674 21.1
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 9.3e-11 72.8 347 28.0
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 9.3e-11 72.8 350 30.6
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 9.3e-11 72.8 347 28.0
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.6e-10 72.0 322 28.6
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 2.1e-10 71.6 707 26.9
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 2.7e-10 71.2 185 34.1
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.3e-09 68.9 356 28.1
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 3.9e-09 67.4 381 26.2
MELO3C005394.2 Cucumis melo HOM05D003765 ORTHO05D004561 1.1e-08 65.9 197 35.0
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 1.5e-08 65.5 278 30.6
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 1.9e-08 65.1 108 41.7
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 2.8e-07 61.2 83 44.6
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 4.8e-07 60.5 142 33.8
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.1e-06 59.3 345 26.7
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 1.1e-06 59.3 320 28.8
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 1.1e-06 59.3 83 43.4
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 6.9e-06 56.6 102 40.2


User provided reference genes

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