Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 8.6e-215 750.0 361 100.0
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 4.4e-195 684.5 387 86.0
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.1e-192 675.6 428 79.0
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.4
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.2e-189 664.1 361 86.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 8.1e-189 663.7 361 85.6
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.1e-188 663.3 361 86.7
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.4e-188 662.9 361 87.5
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.1e-188 661.8 361 85.6
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 4.0e-188 661.4 361 86.4
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 5.3e-188 661.0 361 86.1
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 6.9e-188 660.6 361 86.4
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 86.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 85.9
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 85.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.6e-187 658.7 361 86.7
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 86.4
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 86.1
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 85.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.7e-186 656.0 361 85.9
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.7e-186 656.0 361 85.9
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 4.9e-186 654.4 359 85.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 4.9e-186 654.4 358 85.8
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 85.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 85.3
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.1e-185 653.3 359 85.2
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.1e-185 653.3 357 85.7
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.1e-185 653.3 361 85.9
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 84.8
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 84.2
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 5.4e-185 651.0 358 84.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 9.3e-185 650.2 358 84.6
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.2e-184 649.8 361 83.9
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 2.1e-184 649.0 361 84.8
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.1e-184 649.0 357 84.6
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 2.7e-184 648.7 361 84.8
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 6.0e-184 647.5 357 83.5
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 7.9e-184 647.1 358 84.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 7.9e-184 647.1 358 84.9
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.3e-183 646.4 361 83.9
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.9e-183 644.8 359 84.1
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 3.9e-183 644.8 361 83.7
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 8.7e-183 643.7 361 84.8
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 8.7e-183 643.7 361 82.8
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 4.3e-182 641.3 361 83.1
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 9.6e-182 640.2 396 78.3
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 9.6e-182 640.2 361 82.8
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.6e-181 639.4 360 84.4
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.1e-181 639.0 361 83.1
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.1e-181 639.0 361 82.5
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 2.8e-181 638.6 360 84.2
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.8e-181 638.6 360 84.2
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 6.2e-181 637.5 359 83.0
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.2e-181 637.5 360 83.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 6.2e-181 637.5 360 83.9
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.8e-180 636.0 371 82.2
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.3e-180 634.4 360 83.6
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.5e-179 632.9 361 83.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 82.7
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 82.2
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 3.8e-178 628.2 361 82.0
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 2.5e-177 625.5 358 82.1
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.5e-177 624.4 360 82.5
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 7.1e-177 624.0 359 80.8
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 9.3e-177 623.6 359 80.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-176 622.5 359 81.3
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-176 622.5 359 81.3
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.1e-176 622.5 359 81.3
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 2.1e-176 622.5 362 81.5
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.7e-176 622.1 359 81.3
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.5e-176 621.7 359 80.8
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 7.9e-176 620.5 361 80.6
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 7.9e-176 620.5 416 73.1
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.3e-175 619.8 359 81.1
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 3.0e-175 618.6 357 80.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.5e-174 616.3 357 80.1
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 4.3e-174 614.8 357 81.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 7.4e-174 614.0 359 79.9
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 9.6e-174 613.6 400 74.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.6e-173 612.8 359 80.5
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-173 612.5 359 79.9
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.1e-173 612.5 357 80.4
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.7
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 3.7e-173 611.7 361 79.5
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.1e-172 610.1 361 79.2
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.1e-172 610.1 358 79.3
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.4e-172 609.0 339 84.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 3.4e-171 605.1 387 74.4
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.3e-170 603.2 360 80.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 5.1e-167 591.3 360 78.3
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 8.7e-167 590.5 357 76.8
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 6.9e-164 580.9 366 73.0
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.2e-163 580.1 366 73.2
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.6e-160 569.7 313 86.3
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 9.7e-158 560.5 361 74.8
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.3e-157 560.1 336 78.6
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.6e-152 542.0 312 83.7
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.8e-151 539.7 302 84.4
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 4.4e-150 535.0 306 83.0
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.8e-148 529.6 357 71.1
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.6e-147 525.8 358 68.7
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 3.2e-145 518.8 358 69.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.4e-143 513.5 357 68.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.2e-141 506.1 403 64.0
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 7.7e-139 497.7 352 71.3
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.5e-137 493.4 253 93.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.4e-132 476.9 361 66.8
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 4.2e-129 465.3 368 62.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 4.0e-127 458.8 242 89.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-124 449.9 364 63.5
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.9e-113 413.3 242 80.6
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 8.1e-104 381.3 211 84.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 4.0e-103 379.0 205 86.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 4.2e-76 289.3 180 79.4
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.1e-64 248.4 152 74.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 7.9e-59 231.9 154 70.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.1e-52 211.5 119 79.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.6e-51 206.5 126 74.6
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 5.1e-50 202.6 348 38.2
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 6.3e-48 195.7 207 51.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.6e-41 173.7 98 85.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 3.6e-35 153.3 117 67.5
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 7.5e-25 119.0 59 88.1
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 6.3e-24 115.9 111 56.8
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 7.2e-20 102.4 79 67.1
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 5.4e-15 86.3 39 92.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 9.1e-15 85.5 162 37.7
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 9.1e-15 85.5 51 70.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.8e-07 61.2 183 27.9


User provided reference genes

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