Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 0.0e+00 1725.7 917 100.0
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 0.0e+00 1431.0 928 83.4
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 0.0e+00 1415.2 927 82.4
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 0.0e+00 1085.9 906 64.6
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 6.3e-312 1074.7 943 62.5
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 2.5e-311 1072.0 892 64.9
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 8.9e-309 1063.5 892 64.3
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 6.4e-307 1057.4 922 61.6
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 1.6e-305 1052.7 893 63.8
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 1.0e-304 1050.0 920 62.5
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 1.1e-303 1046.6 924 62.8
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 3.6e-302 1041.6 908 61.6
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 4.8e-302 1041.2 910 62.5
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 2.4e-301 1038.9 912 60.6
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 2.4e-301 1038.9 904 62.1
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 5.3e-301 1037.7 925 60.4
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 5.3e-301 1037.7 908 62.1
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 2.6e-300 1035.4 912 60.7
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 9.9e-300 1033.5 880 63.1
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 2.4e-298 1028.9 929 62.0
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 4.6e-297 1024.6 892 63.2
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 7.4e-295 1017.3 911 61.7
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 4.8e-294 1014.6 922 61.3
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 2.6e-292 1008.8 909 60.7
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 4.9e-291 1004.6 898 60.8
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 1.4e-285 986.5 916 59.5
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 1.4e-285 986.5 921 60.8
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 3.1e-285 985.3 919 59.5
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 6.9e-285 984.2 917 60.2
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 9.0e-285 983.8 925 59.5
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 7.6e-284 980.7 902 60.8
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 1.7e-283 979.5 917 58.7
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 2.9e-283 978.8 915 59.9
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 4.9e-283 978.0 924 58.2
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 1.1e-282 976.9 919 59.5
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 1.4e-282 976.5 893 59.4
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 4.2e-282 974.9 922 59.5
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 4.2e-282 974.9 883 61.5
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 5.5e-282 974.5 863 61.3
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 7.1e-282 974.2 919 59.1
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 9.3e-282 973.8 912 58.2
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 1.6e-281 973.0 908 59.4
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 6.0e-281 971.1 912 59.5
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 2.1e-278 962.6 866 60.5
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 1.2e-276 956.8 894 57.5
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 1.0e-275 953.7 874 60.2
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 3.6e-273 945.3 921 57.0
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 6.7e-272 941.0 932 56.1
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 8.2e-270 934.1 925 56.9
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 6.9e-269 931.0 891 57.9
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.5e-268 929.9 932 55.4
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 4.5e-268 928.3 959 53.9
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 7.7e-268 927.5 867 58.1
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 5.0e-267 924.9 932 57.0
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 3.2e-266 922.2 886 58.2
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 4.2e-266 921.8 880 57.0
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 4.6e-265 918.3 898 57.0
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 1.4e-264 916.8 904 55.8
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 1.1e-263 913.7 902 56.5
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 2.6e-263 912.5 891 57.1
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 5.7e-263 911.4 913 55.5
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 1.3e-262 910.2 800 61.4
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 1.7e-262 909.8 944 55.5
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 8.2e-262 907.5 891 56.8
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 1.4e-261 906.7 906 56.8
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 1.4e-261 906.7 931 55.4
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 1.2e-260 903.7 907 56.8
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 1.5e-260 903.3 914 55.4
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 3.4e-260 902.1 903 55.8
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 3.8e-259 898.7 876 57.0
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 5.0e-259 898.3 901 55.5
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 2.5e-258 896.0 918 54.5
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 4.2e-258 895.2 922 55.7
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 4.2e-258 895.2 922 55.7
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 3.6e-257 892.1 869 57.0
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.4e-256 890.2 921 54.5
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 5.9e-252 874.8 891 54.8
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.3e-251 873.6 889 53.8
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 3.8e-251 872.1 891 54.5
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 4.2e-250 868.6 773 61.8
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.2e-249 867.1 789 61.0
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 2.6e-247 859.4 917 53.5
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 1.7e-246 856.7 860 55.7
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 2.2e-243 846.3 751 60.6
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.1e-237 827.4 921 51.4
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.8e-237 826.6 899 51.6
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 1.6e-236 823.5 860 51.6
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 4.5e-236 822.0 797 58.8
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 4.4e-231 805.4 857 53.2
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.8e-229 800.0 883 51.2
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 2.4e-221 773.1 663 64.4
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 4.3e-218 762.3 474 86.1
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 1.8e-216 756.9 919 49.8
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 5.8e-215 751.9 797 53.2
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 9.2e-213 744.6 803 50.6
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 1.6e-196 690.6 673 57.9
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 1.0e-195 688.0 551 65.2
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 1.8e-184 650.6 548 61.1
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 3.8e-182 642.9 879 44.4
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 1.3e-174 617.8 710 52.3
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 1.3e-174 617.8 661 51.0
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 2.1e-172 610.5 432 76.4
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 3.5e-172 609.8 879 42.0
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 3.3e-170 603.2 888 40.0
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 3.8e-166 589.7 882 39.7
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 1.2e-156 558.1 799 46.7
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 3.8e-142 510.0 896 37.5
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 5.5e-133 479.6 476 58.0
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 4.3e-101 373.6 872 31.3
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 7.3e-101 372.9 962 30.6
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.4e-99 368.6 347 55.9
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 1.5e-98 365.2 954 29.5
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 9.2e-96 355.9 413 51.6
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 1.2e-92 345.5 939 29.1
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 2.4e-88 331.3 310 56.5
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 3.5e-87 327.4 447 45.9
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 1.7e-86 325.1 291 58.1
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 1.0e-78 299.3 353 51.3
Cpa.g.c38803 Carica papaya HOM05D005096 ORTHO05D006566 7.6e-74 283.1 270 55.9
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 2.4e-67 261.5 468 42.1
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 3.5e-63 247.7 256 55.9
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 4.3e-61 240.7 181 71.8
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 5.6e-61 240.4 215 60.0
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 8.2e-52 209.9 395 40.0
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.2e-47 196.1 377 38.5
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 6.1e-47 193.7 163 62.6
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 2.5e-45 188.3 248 43.1
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 3.7e-44 184.5 173 58.4
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 2.3e-38 165.2 132 65.2
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.7e-33 149.1 178 44.9
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 3.8e-33 147.9 155 52.9
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 3.6e-31 141.4 126 61.1
Glyma.18G167550 Glycine max HOM05D005096 ORTHO05D006566 5.7e-29 134.0 96 69.8
Cpa.g.sc370.1 Carica papaya HOM05D005096 ORTHO05D006566 1.1e-27 129.8 128 58.6
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 1.5e-24 119.4 97 63.9
PGSC0003DMG400012881 Solanum tuberosum HOM05D005096 ORTHO05D006566 8.0e-23 113.6 103 61.2
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 2.2e-17 95.5 78 65.4
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 5.5e-16 90.9 94 56.4
arahy.Tifrunner.gnm1.ann1.BB9JSJ Arachis hypogaea HOM05D000384 ORTHO05D000468 1.8e-14 85.9 90 54.4
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 1.5e-13 82.8 145 40.0
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 4.4e-13 81.3 118 45.8
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 9.7e-13 80.1 48 77.1
MD11G1311300 Malus domestica HOM05D005096 ORTHO05D006566 3.7e-12 78.2 68 66.2
SEGI_37612 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.4e-11 76.3 155 27.7
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.6e-10 72.8 92 47.8
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 2.2e-09 68.9 63 55.6


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