Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.3e-157 559.7 276 100.0
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 4.1e-132 474.9 286 86.4
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.0e-126 456.1 286 83.2
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 9.8e-126 453.8 287 82.2
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 7.7e-123 444.1 287 80.1
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 5.2e-103 378.3 282 69.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.0e-98 364.0 282 67.7
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.2e-96 357.1 278 67.3
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 4.7e-96 355.1 275 66.9
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.7e-96 355.1 285 65.3
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.8e-95 353.2 276 66.7
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 2.3e-95 352.8 293 63.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 3.1e-95 352.4 281 64.8
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.2e-95 351.7 276 65.9
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 8.9e-95 350.9 283 65.4
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 8.9e-95 350.9 275 67.3
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 1.5e-94 350.1 288 66.3
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.0e-94 349.7 272 68.8
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 2.0e-94 349.7 280 65.4
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.4e-94 348.6 276 65.6
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 9.9e-94 347.4 290 62.8
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.9e-94 347.4 275 65.8
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 3.7e-93 345.5 279 63.8
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 6.4e-93 344.7 275 64.0
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 6.4e-93 344.7 287 63.1
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.4e-92 343.6 296 64.9
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.1e-92 342.0 281 63.7
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 4.1e-92 342.0 273 65.6
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 5.4e-92 341.7 273 66.7
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 5.4e-92 341.7 279 62.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 2.1e-91 339.7 284 63.4
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.1e-91 339.7 288 63.5
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.1e-91 339.7 289 63.3
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 2.7e-91 339.3 282 64.5
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.5e-91 339.0 282 62.1
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 6.0e-91 338.2 290 63.4
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.0e-90 337.4 279 60.9
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.3e-90 337.0 293 61.8
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 5.1e-90 335.1 291 62.2
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 4.3e-89 332.0 290 60.3
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 5.6e-89 331.6 285 62.5
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 7.3e-89 331.3 180 85.0
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 1.6e-88 330.1 285 61.8
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 1.6e-88 330.1 280 62.5
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 2.1e-88 329.7 272 63.6
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 2.1e-88 329.7 288 62.8
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 3.6e-88 328.9 288 61.5
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 4.7e-88 328.6 244 68.9
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 4.7e-88 328.6 274 63.9
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 8.1e-88 327.8 272 61.4
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.1e-87 327.4 199 78.9
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.1e-87 327.4 295 59.3
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 5.2e-87 325.1 312 57.4
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 8.9e-87 324.3 283 62.9
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 1.2e-86 323.9 184 82.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.8e-86 321.6 278 59.7
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 7.6e-86 321.2 273 62.3
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 7.6e-86 321.2 273 62.3
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 7.6e-86 321.2 273 62.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.7e-85 320.1 283 61.1
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.7e-85 320.1 281 62.3
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.7e-85 320.1 285 60.4
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.2e-85 319.7 193 79.3
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.9e-85 319.3 283 60.4
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 2.9e-85 319.3 198 76.8
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.9e-85 319.3 275 62.2
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 4.9e-85 318.5 286 61.2
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 8.4e-85 317.8 272 62.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.1e-84 315.5 280 60.0
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 5.4e-84 315.1 179 82.1
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 9.2e-84 314.3 183 80.3
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.2e-83 313.9 287 58.2
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.5e-83 312.4 269 61.0
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.3e-82 310.5 281 60.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 5.1e-82 308.5 190 78.9
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 4.3e-81 305.4 295 59.0
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 2.0e-78 296.6 331 50.8
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 7.6e-78 294.7 319 52.7
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.9e-77 292.7 285 56.8
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 8.4e-77 291.2 164 81.7
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 5.4e-76 288.5 227 62.6
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 3.6e-72 275.8 281 56.2
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 5.8e-70 268.5 170 72.4
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 7.6e-70 268.1 163 77.3
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.3e-69 267.3 149 84.6
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 3.2e-68 262.7 158 78.5
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.3e-66 256.5 154 78.6
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 6.7e-66 255.0 244 58.2
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.9e-65 253.4 149 81.2
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.8e-63 246.9 273 52.7
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 9.0e-63 244.6 293 50.9
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 9.0e-63 244.6 221 59.3
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.7e-61 240.4 148 77.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 6.0e-59 231.9 164 67.7
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.5e-57 227.3 249 51.8
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 2.5e-57 226.5 231 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 4.0e-55 219.2 188 54.8
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 1.3e-53 214.2 219 49.3
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.2e-53 213.4 213 51.6
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.9e-53 213.0 255 45.5
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 5.1e-50 202.2 176 60.2
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 3.7e-48 196.1 244 50.4
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.4e-47 194.1 181 50.3
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.2e-44 183.0 285 42.5
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 3.6e-43 179.5 165 57.6
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.9e-42 176.0 277 41.2
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 7.4e-41 171.8 331 35.6
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.8e-39 167.2 201 45.3
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 4.2e-36 156.0 105 70.5
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.8e-34 150.6 173 46.8
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.5e-33 147.5 105 68.6
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 2.8e-32 143.3 176 42.0
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 7.7e-22 108.6 77 70.1
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 3.6e-11 73.2 51 66.7
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 2.0e-06 57.4 62 40.3
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 5.9e-06 55.8 133 34.6


User provided reference genes

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