Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 6.8e-78 293.9 146 100.0
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 4.9e-68 261.2 149 87.9
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.5e-61 239.6 153 79.7
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.0e-61 239.2 179 72.1
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 7.6e-61 237.3 147 80.3
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-60 236.5 147 78.9
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.3e-60 236.5 147 78.9
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.3e-60 236.5 144 79.9
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.7e-60 236.1 151 77.5
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.2e-60 235.7 146 78.1
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 2.2e-60 235.7 140 81.4
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 2.2e-60 235.7 143 81.1
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 3.8e-60 235.0 147 78.9
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 4.9e-60 234.6 147 77.6
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 6.4e-60 234.2 150 78.0
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 8.4e-60 233.8 147 77.6
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 1.1e-59 233.4 150 77.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.4e-59 233.0 146 79.5
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.9e-59 232.6 144 77.8
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.9e-59 232.6 150 76.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.9e-59 232.6 150 77.3
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.9e-59 232.6 153 76.5
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 3.2e-59 231.9 147 76.9
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 4.2e-59 231.5 145 78.6
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 5.4e-59 231.1 151 77.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 7.1e-59 230.7 147 77.6
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 7.1e-59 230.7 147 77.6
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 7.1e-59 230.7 147 77.6
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.1e-59 230.7 147 77.6
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 7.1e-59 230.7 145 77.9
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 9.3e-59 230.3 147 76.9
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 9.3e-59 230.3 147 76.9
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 9.3e-59 230.3 138 79.7
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 9.3e-59 230.3 148 77.0
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.1e-58 229.2 144 77.8
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 2.1e-58 229.2 147 74.8
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.7e-58 228.8 151 77.5
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.7e-58 228.8 147 76.9
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 3.5e-58 228.4 147 76.9
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 3.5e-58 228.4 147 76.9
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 6.0e-58 227.6 144 79.2
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 6.0e-58 227.6 145 76.6
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 6.0e-58 227.6 145 76.6
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 6.0e-58 227.6 138 78.3
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 7.9e-58 227.3 146 74.7
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.9e-58 227.3 147 76.2
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 1.0e-57 226.9 144 77.8
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.3e-57 226.5 150 72.7
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.3e-57 226.5 150 75.3
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 1.3e-57 226.5 138 80.4
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.8e-57 226.1 153 75.2
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 2.3e-57 225.7 144 75.0
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 3.9e-57 224.9 143 74.8
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.9e-57 224.9 143 74.8
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.5e-56 223.0 135 77.8
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.5e-56 223.0 145 76.6
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 3.3e-56 221.9 138 76.1
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 3.3e-56 221.9 145 77.9
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 4.3e-56 221.5 144 74.3
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 7.4e-56 220.7 146 75.3
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 9.6e-56 220.3 145 77.2
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 2.1e-55 219.2 141 75.9
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 2.1e-55 219.2 142 73.2
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 2.8e-55 218.8 140 77.9
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 2.8e-55 218.8 144 75.0
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.7e-55 218.4 138 75.4
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 4.8e-55 218.0 146 74.0
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 8.1e-55 217.2 140 77.9
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 8.1e-55 217.2 149 72.5
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.1e-54 216.9 145 74.5
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.8e-54 216.1 146 73.3
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 1.8e-54 216.1 145 73.8
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.1e-54 215.3 146 73.3
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 4.0e-54 214.9 145 73.8
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 4.0e-54 214.9 145 73.8
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.2e-53 213.4 135 76.3
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 2.0e-53 212.6 149 69.8
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 2.0e-53 212.6 113 81.4
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 3.4e-53 211.8 117 80.3
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 9.9e-53 210.3 136 75.7
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.8e-52 208.4 114 80.7
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 3.8e-52 208.4 140 71.4
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 6.4e-52 207.6 136 74.3
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.9e-51 206.1 145 73.8
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.4e-51 205.7 143 68.5
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.4e-51 205.7 145 74.5
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.2e-51 204.9 150 66.7
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 4.2e-51 204.9 147 70.1
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 9.3e-51 203.8 146 68.5
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.2e-50 203.4 145 73.1
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.6e-50 203.0 145 73.1
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 1.6e-50 203.0 144 71.5
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.1e-50 202.6 146 69.2
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.0e-50 201.1 145 72.4
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 7.9e-50 200.7 136 71.3
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-49 199.9 116 79.3
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 3.0e-49 198.7 141 70.2
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 8.7e-49 197.2 151 68.9
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 2.5e-48 195.7 117 75.2
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 3.7e-47 191.8 142 66.9
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 8.2e-47 190.7 142 66.9
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.0e-45 186.0 136 70.6
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 7.6e-45 184.1 143 65.0
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.0e-44 183.7 143 66.4
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 2.2e-44 182.6 89 95.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 8.4e-44 180.6 142 64.8
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.7e-42 175.6 99 79.8
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 6.0e-42 174.5 151 63.6
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.8e-41 172.9 145 60.7
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.3e-41 172.6 149 60.4
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.2e-39 166.0 87 86.2
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 3.1e-38 162.2 116 72.4
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 3.1e-38 162.2 138 60.9
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 9.0e-38 160.6 112 71.4
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.2e-37 160.2 120 68.3
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-37 159.5 120 65.0
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 6.5e-36 154.5 117 67.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 4.2e-35 151.8 89 76.4
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 2.5e-32 142.5 111 64.9
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.3e-31 140.2 118 67.8
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.4e-30 136.7 110 66.4
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 6.9e-30 134.4 122 64.8
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.4e-29 132.1 111 65.8
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 1.7e-28 129.8 88 68.2
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 6.5e-28 127.9 146 50.0
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.7e-23 113.2 88 67.0
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 2.0e-21 106.3 125 45.6
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.3e-20 103.6 83 67.5
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 3.6e-18 95.5 91 48.4
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.8e-15 85.1 71 64.8
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 8.2e-15 84.3 154 38.3
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.5e-11 73.6 70 58.6
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.5e-11 71.6 66 59.1
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 7.2e-11 71.2 70 57.1


User provided reference genes

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