Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 3.1e-256 887.9 421 100.0
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 1.3e-225 786.2 420 87.6
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 1.0e-222 776.5 420 86.2
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 1.0e-222 776.5 419 86.2
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 1.1e-216 756.5 418 82.1
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 1.4e-216 756.1 419 83.1
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 5.3e-216 754.2 419 82.3
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 2.2e-214 748.8 419 82.8
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 8.5e-214 746.9 418 81.6
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 1.9e-213 745.7 420 81.4
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 2.1e-212 742.3 421 80.5
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 3.6e-212 741.5 419 80.9
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.8e-211 739.2 421 80.5
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 2.3e-211 738.8 418 82.1
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 5.2e-211 737.6 418 81.1
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 6.7e-211 737.3 419 80.7
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 8.8e-211 736.9 419 79.5
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 2.0e-210 735.7 418 78.9
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 2.6e-210 735.3 418 79.9
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 2.6e-210 735.3 418 80.4
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 5.7e-210 734.2 418 78.9
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 7.5e-210 733.8 417 80.3
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 7.5e-210 733.8 421 80.3
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 1.3e-209 733.0 417 80.6
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 2.2e-209 732.3 413 81.4
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 2.2e-209 732.3 419 79.2
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 2.8e-209 731.9 419 79.7
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 4.8e-209 731.1 421 78.9
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 2.4e-208 728.8 421 79.1
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 7.0e-208 727.2 418 79.2
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 1.3e-206 723.0 417 78.7
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 2.2e-206 722.2 419 78.5
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 2.9e-206 721.8 417 78.2
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 2.9e-206 721.8 418 77.8
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 6.5e-206 720.7 415 78.3
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 6.5e-206 720.7 419 79.0
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 8.5e-206 720.3 415 78.6
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 8.5e-206 720.3 419 78.5
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 1.5e-205 719.5 416 77.9
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 1.9e-205 719.2 417 78.4
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 1.9e-205 719.2 416 79.3
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 9.4e-205 716.8 419 78.3
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 2.1e-204 715.7 419 77.1
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 3.6e-204 714.9 416 76.4
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 6.1e-204 714.1 416 76.7
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 8.0e-204 713.8 418 76.8
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 8.0e-204 713.8 416 77.4
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 8.0e-204 713.8 418 77.0
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 2.3e-203 712.2 419 77.1
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 3.0e-203 711.8 452 73.9
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 6.8e-203 710.7 448 74.1
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.5e-202 709.5 448 73.9
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.0e-202 709.1 417 77.7
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 2.6e-202 708.8 422 77.3
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 3.4e-202 708.4 417 77.5
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.7e-201 706.1 417 77.2
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 2.8e-201 705.3 415 75.4
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 3.7e-201 704.9 422 77.3
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 4.8e-201 704.5 398 81.2
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 6.3e-201 704.1 420 76.4
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 1.1e-200 703.4 418 76.8
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.4e-200 703.0 416 76.4
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.4e-200 703.0 421 75.1
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 2.4e-200 702.2 421 75.5
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 3.1e-200 701.8 459 71.9
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 3.1e-200 701.8 419 75.7
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 3.1e-200 701.8 416 75.0
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 5.4e-200 701.0 416 76.0
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 7.0e-200 700.7 418 75.6
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 5.9e-199 697.6 400 80.2
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 1.0e-198 696.8 416 75.0
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 1.3e-198 696.4 417 75.3
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 2.9e-198 695.3 417 74.8
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.9e-198 695.3 417 77.7
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 5.0e-198 694.5 419 75.9
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.0e-198 694.5 417 77.5
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 6.5e-198 694.1 419 74.7
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 1.1e-197 693.3 416 74.8
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 4.2e-197 691.4 424 75.5
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 7.2e-197 690.6 417 74.8
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 9.5e-197 690.3 417 77.5
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 1.6e-196 689.5 422 76.1
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 2.1e-196 689.1 416 74.3
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 2.8e-196 688.7 417 73.6
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.0e-195 686.8 416 74.0
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 1.4e-195 686.4 416 74.3
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 6.8e-195 684.1 422 74.2
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 6.8e-195 684.1 412 74.5
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 8.8e-195 683.7 420 73.6
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 2.2e-193 679.1 456 68.6
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.8e-193 678.7 504 64.1
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 4.1e-192 674.9 408 77.0
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 1.6e-191 672.9 396 77.3
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 1.6e-191 672.9 428 73.6
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 1.3e-190 669.8 402 74.9
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 6.6e-190 667.5 402 74.6
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 4.3e-189 664.8 401 74.8
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 4.3e-189 664.8 401 74.8
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.6e-188 661.8 425 70.8
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 6.8e-187 657.5 426 70.7
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 1.2e-186 656.8 432 72.2
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 4.9e-185 651.4 429 71.6
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 4.9e-185 651.4 456 68.4
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 5.9e-183 644.4 418 69.1
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 4.7e-180 634.8 404 71.5
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 6.2e-180 634.4 420 66.7
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 1.9e-176 622.9 418 70.8
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 8.9e-171 604.0 401 70.6
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 1.3e-169 600.1 415 68.9
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 6.8e-163 577.8 418 63.9
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 5.8e-162 574.7 417 64.3
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 2.7e-159 565.8 371 72.0
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 3.5e-159 565.5 421 64.4
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 1.3e-158 563.5 416 61.8
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 9.6e-157 557.4 418 62.0
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 1.5e-154 550.1 358 69.0
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 7.6e-154 547.7 421 64.4
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 2.4e-152 542.7 440 63.2
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 2.7e-151 539.3 300 80.3
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 9.9e-146 520.8 358 66.8
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 8.1e-140 501.1 424 54.7
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 8.7e-134 481.1 332 69.0
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 1.0e-129 467.6 464 54.3
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 1.2e-127 460.7 463 54.0
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 8.7e-126 454.5 468 49.4
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 1.4e-120 437.2 469 48.2
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 9.7e-109 397.9 422 48.6
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 3.1e-46 190.3 129 66.7
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 2.1e-31 141.0 93 68.8
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 5.3e-30 136.3 82 74.4
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.2e-29 135.2 129 51.9
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 1.5e-29 134.8 89 66.3
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 1.5e-29 134.8 89 66.3
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 2.7e-18 97.4 69 62.3
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 7.9e-18 95.9 66 68.2
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 3.0e-17 94.0 136 39.7
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 3.9e-17 93.6 66 66.7
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.1e-16 92.0 55 72.7
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 5.6e-16 89.7 64 64.1
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.6e-10 70.1 68 50.0
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 1.6e-07 61.6 204 25.5
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 3.7e-07 60.5 48 60.4
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 8.2e-07 59.3 188 29.3


User provided reference genes

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