Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025004 Sechium edule HOM05D003693 ORTHO05D004698 7.9e-64 246.9 120 100.0
Sed0016989 Sechium edule HOM05D003693 ORTHO05D004698 6.9e-60 233.8 120 95.0
ClCG11G009710 Citrullus lanatus HOM05D003693 ORTHO05D004698 4.5e-59 231.1 120 95.0
CsaV3_2G010560 Cucumis sativus L. HOM05D003693 ORTHO05D004698 1.0e-58 229.9 120 95.0
Manes.12G004200 Manihot esculenta HOM05D003693 ORTHO05D004698 1.6e-56 222.6 120 90.8
PSO384G0563 Papaver somniferum HOM05D003693 ORTHO05D004698 1.0e-55 219.9 120 88.3
Thecc.01G406700 Theobroma cacao HOM05D003693 ORTHO05D004698 1.3e-55 219.5 120 90.0
Dinv43405 Davidia involucrata HOM05D003693 ORTHO05D004698 1.8e-55 219.2 120 90.8
PSO339G5758 Papaver somniferum HOM05D003693 ORTHO05D004698 1.8e-55 219.2 120 87.5
QL10p037598 Quercus lobata HOM05D003693 ORTHO05D004698 2.3e-55 218.8 119 89.9
Ciclev10011203m.g Citrus clementina HOM05D003693 ORTHO05D004698 3.0e-55 218.4 120 88.3
Duzib268G0828 Durio zibethinus HOM05D003693 ORTHO05D004698 3.0e-55 218.4 120 89.2
EL10Ac2g04376 Beta vulgaris HOM05D003693 ORTHO05D004698 3.9e-55 218.0 120 89.2
Duzib133G0510 Durio zibethinus HOM05D003693 ORTHO05D004698 5.1e-55 217.6 120 89.2
CSS0039233 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 8.7e-55 216.9 120 88.3
GSVIVG01032211001 Vitis vinifera HOM05D003693 ORTHO05D004698 8.7e-55 216.9 120 86.7
TPR.G33878 Trifolium pratense HOM05D003693 ORTHO05D004698 1.1e-54 216.5 120 86.7
TAR563G0002 Trochodendron aralioides HOM05D003693 ORTHO05D004698 1.1e-54 216.5 120 89.2
Duzib128G1866 Durio zibethinus HOM05D003693 ORTHO05D004698 1.5e-54 216.1 120 89.2
Actinidia19423 Actinidia chinensis HOM05D003693 ORTHO05D004698 1.9e-54 215.7 120 89.2
CiPaw.16G119500 Carya illinoinensis HOM05D003693 ORTHO05D004698 1.9e-54 215.7 120 89.2
Lalb_Chr01g0020541 Lupinus albus HOM05D003693 ORTHO05D004698 1.9e-54 215.7 120 85.8
TWI36G1545 Tripterygium wilfordii HOM05D003693 ORTHO05D004698 2.5e-54 215.3 120 88.3
COL.COLO4_12338 Corchorus olitorius HOM05D003693 ORTHO05D004698 3.3e-54 214.9 120 88.3
Phvul.008G053200 Phaseolus vulgaris HOM05D003693 ORTHO05D004698 3.3e-54 214.9 120 85.8
TWI18G0649 Tripterygium wilfordii HOM05D003693 ORTHO05D004698 3.3e-54 214.9 120 89.2
Gohir.D12G103600 Gossypium hirsutum HOM05D003693 ORTHO05D004698 4.3e-54 214.5 122 88.5
Gorai.008G112800 Gossypium raimondii HOM05D003693 ORTHO05D004698 4.3e-54 214.5 122 88.5
SGA_v2.0_scaffold119G32763 Striga asiatica HOM05D003693 ORTHO05D004698 4.3e-54 214.5 120 87.5
Migut.B01266 Erythranthe guttata HOM05D003693 ORTHO05D004698 5.7e-54 214.2 120 87.5
Lalb_Chr03g0038731 Lupinus albus HOM05D003693 ORTHO05D004698 7.4e-54 213.8 120 85.8
Medtr7g080270 Medicago truncatula HOM05D003693 ORTHO05D004698 7.4e-54 213.8 120 85.8
Carub.0003s2444 Capsella rubella HOM05D003693 ORTHO05D004698 9.7e-54 213.4 120 87.5
AUR62023098 Chenopodium quinoa HOM05D003693 ORTHO05D004698 9.7e-54 213.4 120 88.3
PGR119G0062 Punica granatum HOM05D003693 ORTHO05D004698 9.7e-54 213.4 120 86.7
THA.LOC104821617 Tarenaya hassleriana HOM05D003693 ORTHO05D004698 9.7e-54 213.4 120 88.3
TPR.G34077 Trifolium pratense HOM05D003693 ORTHO05D004698 9.7e-54 213.4 120 85.8
AUR62009420 Chenopodium quinoa HOM05D003693 ORTHO05D004698 1.3e-53 213.0 120 87.5
Gohir.A12G100800 Gossypium hirsutum HOM05D003693 ORTHO05D004698 1.3e-53 213.0 122 87.7
SalBow5G4957 Salvia bowleyana HOM05D003693 ORTHO05D004698 1.3e-53 213.0 120 86.7
Cpa.g.sc39.19 Carica papaya HOM05D003693 ORTHO05D004698 1.6e-53 212.6 120 88.3
Eucgr.H01402 Eucalyptus grandis HOM05D003693 ORTHO05D004698 1.6e-53 212.6 120 87.5
Prupe.6G362600 Prunus persica HOM05D003693 ORTHO05D004698 1.6e-53 212.6 120 86.7
Gorai.012G026300 Gossypium raimondii HOM05D003693 ORTHO05D004698 2.2e-53 212.2 120 87.5
CANSAT21G0769 Cannabis sativa HOM05D003693 ORTHO05D004698 2.8e-53 211.8 120 87.5
Ca_07998_v3 Cicer arietinum L. HOM05D003693 ORTHO05D004698 2.8e-53 211.8 120 85.0
Nitab4.5_0005367g0010 Nicotiana tabacum HOM05D003693 ORTHO05D004698 2.8e-53 211.8 120 85.8
Psat3g102600 Pisum sativum HOM05D003693 ORTHO05D004698 2.8e-53 211.8 120 85.0
Cfa020929 Carpinus fangiana HOM05D003693 ORTHO05D004698 3.7e-53 211.5 120 88.3
Sc10g0000370 Simmondsia chinensis HOM05D003693 ORTHO05D004698 3.7e-53 211.5 120 86.7
Atru.chr12.1748 Acer truncatum HOM05D003693 ORTHO05D004698 4.8e-53 211.1 120 87.5
FAN14G5956 Fragaria x ananassa HOM05D003693 ORTHO05D004698 4.8e-53 211.1 122 86.9
Hma1.2p1_0685F.1_g203180 Hydrangea macrophylla HOM05D003693 ORTHO05D004698 4.8e-53 211.1 120 86.7
MD12G1263800 Malus domestica HOM05D003693 ORTHO05D004698 4.8e-53 211.1 120 85.8
ATR1096G033 Amborella trichopoda HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
AL3G39260 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BcaB03g14607 Brassica carinata HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BcaB06g26591 Brassica carinata HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BcaC01g03357 Brassica carinata HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BcaC06g35626 Brassica carinata HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
A03p43420 Brassica napus HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
A07p08260 Brassica napus HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
C03p53370 Brassica napus HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BolC3t17596H Brassica oleracea HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BraA03t13480Z Brassica rapa HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
BraA07t28609Z Brassica rapa HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
Thhalv10002424m.g Eutrema salsugineum HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
Glyma.09G249100 Glycine max HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 84.2
Nitab4.5_0001244g0140 Nicotiana tabacum HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 85.0
Rhsim07G0058800 Rhododendron simsii HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
Sp3g21850 Schrenkiella parvula HOM05D003693 ORTHO05D004698 6.3e-53 210.7 120 86.7
Aa31LG8G10790 Aethionema arabicum HOM05D003693 ORTHO05D004698 8.2e-53 210.3 120 85.8
AT3G24090 Arabidopsis thaliana HOM05D003693 ORTHO05D004698 8.2e-53 210.3 120 85.8
MELO3C008557.2 Cucumis melo HOM05D003693 ORTHO05D004698 8.2e-53 210.3 120 88.3
Peaxi162Scf00071g01043 Petunia axillaris HOM05D003693 ORTHO05D004698 8.2e-53 210.3 120 87.5
Thecc.05G189800 Theobroma cacao HOM05D003693 ORTHO05D004698 8.2e-53 210.3 120 86.7
FAN02G0024 Fragaria x ananassa HOM05D003693 ORTHO05D004698 1.1e-52 209.9 122 86.1
Lj1g0027377 Lotus japonicus HOM05D003693 ORTHO05D004698 1.1e-52 209.9 120 84.2
FvH4_6g00360 Fragaria vesca HOM05D003693 ORTHO05D004698 1.4e-52 209.5 122 86.1
FAN09G1864 Fragaria x ananassa HOM05D003693 ORTHO05D004698 1.4e-52 209.5 122 86.1
Glyma.18G243300 Glycine max HOM05D003693 ORTHO05D004698 1.4e-52 209.5 120 84.2
Gohir.A05G393100 Gossypium hirsutum HOM05D003693 ORTHO05D004698 1.4e-52 209.5 120 86.7
CARHR100130 Cardamine hirsuta HOM05D003693 ORTHO05D004698 1.8e-52 209.1 120 85.0
PGR031G3615 Punica granatum HOM05D003693 ORTHO05D004698 1.8e-52 209.1 120 85.0
vmacro13696 Vaccinium macrocarpon HOM05D003693 ORTHO05D004698 1.8e-52 209.1 120 85.8
AL8G20490 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 2.4e-52 208.8 120 85.8
MD04G1246300 Malus domestica HOM05D003693 ORTHO05D004698 2.4e-52 208.8 120 86.7
Cc02_g28770 Coffea canephora HOM05D003693 ORTHO05D004698 3.1e-52 208.4 120 85.0
FAN05G2538 Fragaria x ananassa HOM05D003693 ORTHO05D004698 3.1e-52 208.4 122 85.2
Peaxi162Scf00694g00440 Petunia axillaris HOM05D003693 ORTHO05D004698 3.1e-52 208.4 118 85.6
AL8G20570 Arabidopsis lyrata HOM05D003693 ORTHO05D004698 4.1e-52 208.0 120 85.0
CDE04G2718 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 4.1e-52 208.0 120 83.3
Gohir.D04G022000 Gossypium hirsutum HOM05D003693 ORTHO05D004698 4.1e-52 208.0 120 85.8
MBI19_g25011_MAGBIO Magnolia biondii HOM05D003693 ORTHO05D004698 4.1e-52 208.0 120 85.8
Potri.019G054500 Populus trichocarpa HOM05D003693 ORTHO05D004698 4.1e-52 208.0 120 85.8
Nitab4.5_0001676g0080 Nicotiana tabacum HOM05D003693 ORTHO05D004698 5.3e-52 207.6 120 85.0
RcHm_v2.0_Chr3g0447661 Rosa chinensis HOM05D003693 ORTHO05D004698 5.3e-52 207.6 122 85.2
Sabra19G0063500 Salix brachista HOM05D003693 ORTHO05D004698 5.3e-52 207.6 120 84.2
MSTRG.17008 Avicennia marina HOM05D003693 ORTHO05D004698 9.0e-52 206.8 120 85.8
TAR369G0556 Trochodendron aralioides HOM05D003693 ORTHO05D004698 1.2e-51 206.5 120 87.5
C07p12800 Brassica napus HOM05D003693 ORTHO05D004698 1.5e-51 206.1 121 86.0
BolC7t41766H Brassica oleracea HOM05D003693 ORTHO05D004698 1.5e-51 206.1 121 86.0
Os12g0131100 Oryza sativa ssp. japonica HOM05D003693 ORTHO05D004698 1.5e-51 206.1 120 84.2
Solyc01g087870.4 Solanum lycopersicum HOM05D003693 ORTHO05D004698 1.5e-51 206.1 120 84.2
Sopen01g034800 Solanum pennellii HOM05D003693 ORTHO05D004698 1.5e-51 206.1 120 84.2
PGSC0003DMG400006778 Solanum tuberosum HOM05D003693 ORTHO05D004698 1.5e-51 206.1 120 84.2
MSTRG.20559 Avicennia marina HOM05D003693 ORTHO05D004698 2.0e-51 205.7 120 85.0
SalBow6G5509 Salvia bowleyana HOM05D003693 ORTHO05D004698 2.0e-51 205.7 120 83.3
SalBow6G6742 Salvia bowleyana HOM05D003693 ORTHO05D004698 2.0e-51 205.7 120 83.3
unitig_0.g1393 Utricularia gibba HOM05D003693 ORTHO05D004698 2.0e-51 205.7 120 84.2
Aqoxy1G02790 Aquilegia oxysepala HOM05D003693 ORTHO05D004698 2.6e-51 205.3 120 85.0
Aqoxy5G04181 Aquilegia oxysepala HOM05D003693 ORTHO05D004698 3.4e-51 204.9 120 85.0
arahy.Tifrunner.gnm1.ann1.55VZFW Arachis hypogaea HOM05D003693 ORTHO05D004698 3.4e-51 204.9 120 82.5
CAN.G1619.1 Capsicum annuum HOM05D003693 ORTHO05D004698 5.9e-51 204.1 120 83.3
THA.LOC104808730 Tarenaya hassleriana HOM05D003693 ORTHO05D004698 1.0e-50 203.4 120 85.0
HPP92_019436 Vanilla planifolia HOM05D003693 ORTHO05D004698 1.3e-50 203.0 120 82.5
ECA248G0053 Erigeron canadensis HOM05D003693 ORTHO05D004698 2.2e-50 202.2 120 86.7
Zm00001eb163520 Zea mays HOM05D003693 ORTHO05D004698 2.2e-50 202.2 121 83.5
HPP92_019410 Vanilla planifolia HOM05D003693 ORTHO05D004698 3.8e-50 201.4 120 81.7
HanXRQChr06g0179741 Helianthus annuus HOM05D003693 ORTHO05D004698 5.0e-50 201.1 120 85.0
Lsat_1_v5_gn_1_104980 Lactuca sativa HOM05D003693 ORTHO05D004698 5.0e-50 201.1 120 85.8
Oeu014595.1 Olea europaea HOM05D003693 ORTHO05D004698 8.5e-50 200.3 120 82.5
arahy.Tifrunner.gnm1.ann1.RCZ69X Arachis hypogaea HOM05D003693 ORTHO05D004698 1.1e-49 199.9 119 81.5
Haze_19361 Corylus avellana HOM05D003693 ORTHO05D004698 1.4e-49 199.5 140 75.7
SHI13710 Sapria himalayana HOM05D003693 ORTHO05D004698 1.4e-49 199.5 118 83.1
SEGI_39911 Sequoiadendron giganteum HOM05D003693 ORTHO05D004698 1.4e-49 199.5 120 80.0
VMungo1383G0289 Vigna mungo HOM05D003693 ORTHO05D004698 5.5e-49 197.6 113 83.2
Pp3c1_10100 Physcomitrium patens HOM05D003693 ORTHO05D004698 1.6e-48 196.1 120 79.2
DCAR_029706 Daucus carota HOM05D003693 ORTHO05D004698 2.7e-48 195.3 121 81.8
Pp3c2_32740 Physcomitrium patens HOM05D003693 ORTHO05D004698 4.6e-48 194.5 120 78.3
Ah.10g038580 Amaranthus hybridus HOM05D003693 ORTHO05D004698 1.0e-47 193.4 120 82.5
Mapoly0131s0027 Marchantia polymorpha HOM05D003693 ORTHO05D004698 2.3e-47 192.2 120 79.2
CDE08G0573 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 1.7e-45 186.0 110 81.8
SMO301G0028 Selaginella moellendorffii HOM05D003693 ORTHO05D004698 2.8e-45 185.3 142 69.0
Cc00_g28470 Coffea canephora HOM05D003693 ORTHO05D004698 1.8e-44 182.6 125 76.0
CSS0029083 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 2.4e-44 182.2 143 68.5
CSS0022704 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 3.8e-42 174.9 138 65.9
CSS0008601 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 1.9e-41 172.6 138 65.2
Manes.13G004500 Manihot esculenta HOM05D003693 ORTHO05D004698 5.5e-41 171.0 121 75.2
Cc00_g31680 Coffea canephora HOM05D003693 ORTHO05D004698 2.1e-40 169.1 121 71.9
MCO09G229 Micromonas commoda HOM05D003693 ORTHO05D004698 3.9e-39 164.9 121 66.9
Actinidia08353 Actinidia chinensis HOM05D003693 ORTHO05D004698 1.5e-38 162.9 92 87.0
Cre08.g375500 Chlamydomonas reinhardtii HOM05D003693 ORTHO05D004698 5.7e-38 161.0 118 64.4
Lj8C726G3 Lonicera japonica HOM05D003693 ORTHO05D004698 5.7e-38 161.0 92 85.9
Cc00_g27460 Coffea canephora HOM05D003693 ORTHO05D004698 1.4e-36 156.4 120 68.3
Nn2g12199 Nelumbo nucifera HOM05D003693 ORTHO05D004698 1.8e-36 156.0 89 85.4
Eucgr.H01630 Eucalyptus grandis HOM05D003693 ORTHO05D004698 2.6e-35 152.1 86 86.0
Eucgr.H01633 Eucalyptus grandis HOM05D003693 ORTHO05D004698 2.2e-34 149.1 93 77.4
PRCOL_00001226 Prasinoderma coloniale HOM05D003693 ORTHO05D004698 1.6e-32 142.9 126 56.3
Lj9A641G58 Lonicera japonica HOM05D003693 ORTHO05D004698 3.3e-22 108.6 120 54.2
Migut.C00049 Erythranthe guttata HOM05D003693 ORTHO05D004698 1.6e-19 99.8 66 75.8
CDE07G0727 Ceratophyllum demersum HOM05D003693 ORTHO05D004698 1.9e-17 92.8 48 89.6
Lsat_1_v5_gn_1_126760 Lactuca sativa HOM05D002996 ORTHO05D004698 1.2e-11 73.6 36 91.7
CSS0010682 Camellia sinensis var. sinensis HOM05D003693 ORTHO05D004698 5.0e-10 68.2 35 88.6
Lsat_1_v5_gn_2_39580 Lactuca sativa HOM05D003693 ORTHO05D004698 5.0e-10 68.2 38 84.2
AagrBONN_evm.TU.Sc2ySwM_344.1788 Anthoceros agrestis HOM05D003693 ORTHO05D004698 3.3e-09 65.5 35 82.9
CDE04G0915 Ceratophyllum demersum HOM05D003693 ORTHO05D021141 5.5e-09 64.7 35 80.0
Cc00_g09330 Coffea canephora HOM05D003693 ORTHO05D004698 3.4e-06 55.5 32 81.2
Cc00_g09380 Coffea canephora HOM05D003693 ORTHO05D004698 3.4e-06 55.5 32 81.2
Eucgr.H01405 Eucalyptus grandis HOM05D003693 ORTHO05D004698 7.5e-06 54.3 28 89.3


User provided reference genes

Program Settings