Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.5e-33 144.1 75 100.0
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 8.2e-27 123.2 75 86.7
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.1e-26 121.3 74 87.8
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 4.1e-26 120.9 75 86.7
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.1e-14 82.0 75 57.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.6e-14 81.3 75 57.3
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.6e-14 81.3 75 58.7
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.6e-14 81.3 75 58.7
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-12 76.3 74 51.4
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.0e-12 75.5 78 55.1
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 2.6e-12 75.1 82 51.2
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.4e-12 74.7 75 56.0
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.4e-12 74.7 75 50.7
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 3.4e-12 74.7 75 53.3
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 5.7e-12 73.9 78 53.8
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 5.7e-12 73.9 75 52.0
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.5e-12 73.6 75 54.7
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 7.5e-12 73.6 76 51.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 9.7e-12 73.2 71 53.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 9.7e-12 73.2 74 50.0
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.7e-11 72.4 75 52.0
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.7e-11 72.4 75 50.7
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-11 72.0 75 53.3
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-11 72.0 75 53.3
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.2e-11 72.0 75 49.3
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-11 71.6 75 49.3
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 74 48.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 6.3e-11 70.5 68 57.4
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-11 70.1 68 57.4
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 8.3e-11 70.1 75 53.3
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-10 69.7 68 55.9
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-10 69.7 75 49.3
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.1e-10 69.7 71 54.9
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 52.0
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.4e-10 69.3 76 51.3
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 49.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-10 68.9 68 55.9
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-10 68.9 68 55.9
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-10 68.9 74 47.3
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.8e-10 68.9 70 54.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-10 68.6 75 53.3
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 2.4e-10 68.6 76 50.0
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.4e-10 68.6 76 51.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.4e-10 68.6 75 50.7
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.4e-10 68.6 67 53.7
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.1e-10 68.2 77 53.2
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.1e-10 68.2 76 51.3
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 3.1e-10 68.2 75 48.0
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.1e-10 67.8 66 54.5
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 5.3e-10 67.4 77 48.1
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 1.2e-09 66.2 66 54.5
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-09 66.2 76 50.0
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.2e-09 66.2 75 45.3
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.6e-09 65.9 75 42.7
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.6e-09 65.9 72 51.4
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-09 65.9 75 41.3
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-09 65.9 65 53.8
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.7e-09 65.1 65 47.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-09 65.1 74 50.0
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-09 64.3 76 52.6
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-09 64.3 76 52.6
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-09 64.3 81 49.4
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 5.9e-09 63.9 75 42.7
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 5.9e-09 63.9 79 48.1
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.7e-09 63.5 76 50.0
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-08 63.2 75 54.7
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-08 63.2 76 48.7
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-08 63.2 66 50.0
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.0e-08 63.2 75 42.7
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 1.3e-08 62.8 68 52.9
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-08 62.4 76 51.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-08 62.4 75 46.7
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-08 62.4 75 44.0
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-08 62.4 74 48.6
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-08 62.0 68 47.1
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.2e-08 62.0 67 55.2
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-08 61.6 76 53.9
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-08 61.6 74 44.6
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 2.9e-08 61.6 76 48.7
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.8e-08 61.2 75 50.7
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.8e-08 61.2 68 47.1
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 3.8e-08 61.2 77 48.1
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.8e-08 61.2 75 48.0
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-08 61.2 74 45.9
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 3.8e-08 61.2 70 51.4
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 3.8e-08 61.2 76 46.1
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-08 60.8 76 47.4
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 5.0e-08 60.8 76 48.7
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 8.5e-08 60.1 74 45.9
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-07 59.7 75 52.0
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.1e-07 59.7 71 52.1
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-07 59.3 74 45.9
Sed0000720 Sechium edule HOM05D006282 ORTHO05D007460 1.5e-07 59.3 78 46.2
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 1.9e-07 58.9 71 52.1
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-07 58.9 68 48.5
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 2.5e-07 58.5 75 50.7
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 2.5e-07 58.5 75 50.7
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.2e-07 58.2 77 46.8
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 3.2e-07 58.2 82 41.5
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-07 57.8 78 51.3
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-07 57.8 69 50.7
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 4.2e-07 57.8 77 46.8
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 4.2e-07 57.8 76 50.0
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 7.2e-07 57.0 76 44.7
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 9.4e-07 56.6 79 43.0
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 9.4e-07 56.6 71 50.7
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.2e-06 56.2 72 50.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.2e-06 56.2 62 45.2
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 3.6e-06 54.7 63 42.9


User provided reference genes

Program Settings