Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.9e-192 675.6 337 100.0
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 5.6e-115 418.3 352 66.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.0e-113 412.1 347 66.0
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 6.8e-113 411.4 350 65.4
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.6e-96 356.3 309 63.4
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.4e-96 355.9 280 65.4
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.4e-96 355.9 280 65.4
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 2.4e-94 349.7 327 60.2
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 4.1e-94 349.0 318 58.8
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.6e-93 347.1 319 58.6
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.0e-92 344.4 313 61.0
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 5.1e-92 342.0 299 62.5
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 6.6e-92 341.7 318 57.9
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 6.6e-92 341.7 345 55.9
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.5e-91 339.7 303 60.4
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 9.5e-91 337.8 298 61.7
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 1.6e-90 337.0 334 56.9
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.8e-90 336.3 333 57.1
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 2.8e-90 336.3 328 56.1
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 8.1e-90 334.7 280 62.1
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.1e-89 334.3 348 56.0
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.4e-89 334.0 276 62.0
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.8e-89 333.6 280 64.6
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.1e-89 332.8 333 56.5
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 4.0e-89 332.4 333 57.7
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 5.2e-89 332.0 280 62.1
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 6.8e-89 331.6 278 62.9
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 6.8e-89 331.6 321 58.6
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.2e-88 330.9 348 55.7
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.5e-88 330.5 331 56.8
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 2.6e-88 329.7 280 62.9
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 9.9e-88 327.8 278 62.2
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 2.2e-87 326.6 314 58.6
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.9e-87 325.5 280 61.8
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 8.4e-87 324.7 344 54.4
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.4e-86 323.2 276 63.4
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 3.2e-86 322.8 282 60.6
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 7.1e-86 321.6 322 54.0
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.1e-85 320.1 313 56.5
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.1e-85 320.1 313 56.5
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 6.0e-85 318.5 326 54.6
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 1.3e-84 317.4 278 60.8
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.3e-84 317.4 350 53.4
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 3.0e-84 316.2 286 60.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.9e-84 315.8 302 58.3
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 6.6e-84 315.1 316 56.3
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 8.6e-84 314.7 343 52.5
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.1e-83 314.3 281 60.9
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 4.3e-83 312.4 280 58.6
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 1.2e-82 310.8 280 60.0
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 2.1e-82 310.1 272 59.6
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.1e-82 310.1 310 53.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 2.8e-82 309.7 281 59.4
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 3.6e-82 309.3 316 56.0
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 4.7e-82 308.9 281 59.1
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 4.7e-82 308.9 280 60.4
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.1e-81 307.8 280 59.6
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 4.0e-81 305.8 283 59.0
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.8e-81 305.1 323 52.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 6.8e-81 305.1 316 55.1
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 8.9e-81 304.7 281 59.1
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.6e-80 303.1 316 54.4
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 4.4e-80 302.4 280 57.9
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 4.4e-80 302.4 290 55.2
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.3e-79 300.8 312 54.2
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 2.9e-79 299.7 280 56.8
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.4e-78 297.4 278 58.6
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 1.2e-77 294.3 281 55.5
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.7e-76 290.4 320 52.8
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.3e-76 290.0 320 52.5
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 3.0e-76 289.7 319 52.7
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 3.9e-76 289.3 310 53.9
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.9e-75 287.0 288 55.9
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 2.5e-75 286.6 288 55.9
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 4.3e-75 285.8 340 50.0
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 5.6e-75 285.4 285 56.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 2.1e-74 283.5 328 51.8
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 2.8e-74 283.1 319 51.1
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 2.8e-74 283.1 319 51.1
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.6e-74 282.7 325 52.6
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 8.1e-74 281.6 280 55.7
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 3.1e-73 279.6 278 54.3
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 5.3e-73 278.9 289 56.1
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 9.0e-73 278.1 320 50.6
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 3.4e-72 276.2 318 50.6
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.7e-69 266.5 307 50.2
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 3.3e-67 259.6 275 54.9
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 2.6e-64 250.0 274 49.3
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 9.3e-62 241.5 207 59.9
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 6.2e-58 228.8 283 45.2
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 2.6e-56 223.4 290 46.6
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 6.7e-52 208.8 132 75.0
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.9e-43 180.6 190 53.7
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 9.7e-43 178.3 277 37.2
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.1e-41 174.9 119 68.1
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 3.7e-34 149.8 204 48.5
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.7e-29 132.9 273 33.7
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 6.1e-29 132.5 271 33.9
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 3.8e-23 113.2 256 35.2
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 9.4e-22 108.6 136 44.9
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 4.0e-20 103.2 192 38.5
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 8.2e-18 95.5 256 30.1
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 8.2e-18 95.5 119 47.1
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 9.4e-14 82.0 116 44.8
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 4.4e-11 73.2 283 25.8
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 4.1e-09 66.6 108 37.0


User provided reference genes

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