Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024836 Sechium edule HOM05D007748 ORTHO05D009345 9.0e-195 683.7 426 100.0
Sed0012615 Sechium edule HOM05D007748 ORTHO05D009345 2.4e-75 287.0 485 54.8
CsaV3_6G012500 Cucumis sativus L. HOM05D007748 ORTHO05D009345 4.8e-71 272.7 430 47.2
ClCG02G017390 Citrullus lanatus HOM05D007748 ORTHO05D009345 1.9e-67 260.8 380 48.9
MELO3C013526.2 Cucumis melo HOM05D007748 ORTHO05D009345 3.0e-57 226.9 464 42.0
QL08p037531 Quercus lobata HOM05D007748 ORTHO05D009345 4.8e-23 113.2 475 36.0
Cfa014551 Carpinus fangiana HOM05D007748 ORTHO05D009345 8.5e-20 102.4 473 37.0
Haze_13098 Corylus avellana HOM05D007748 ORTHO05D009345 3.0e-17 94.0 487 35.5
FAN09G1549 Fragaria x ananassa HOM05D007748 ORTHO05D009345 3.0e-17 94.0 488 27.5
Manes.13G151000 Manihot esculenta HOM05D007748 ORTHO05D009345 4.0e-17 93.6 252 33.3
TWI18G1232 Tripterygium wilfordii HOM05D007748 ORTHO05D009345 4.0e-17 93.6 351 37.6
Potri.013G145900 Populus trichocarpa HOM05D007748 ORTHO05D009345 8.8e-17 92.4 252 46.4
Phvul.011G112100 Phaseolus vulgaris HOM05D007748 ORTHO05D009345 3.4e-16 90.5 367 28.3
Gohir.A03G159700 Gossypium hirsutum HOM05D007748 ORTHO05D009345 7.5e-16 89.4 262 44.7
arahy.Tifrunner.gnm1.ann1.5P5A6I Arachis hypogaea HOM05D007748 ORTHO05D009345 9.8e-16 89.0 482 29.0
Lalb_Chr19g0135431 Lupinus albus HOM05D007748 ORTHO05D009345 2.2e-15 87.8 86 55.8
Duzib052G0236 Durio zibethinus HOM05D007748 ORTHO05D009345 4.8e-15 86.7 230 46.5
Thecc.02G172800 Theobroma cacao HOM05D007748 ORTHO05D009345 8.3e-15 85.9 254 36.2
Ca_20695_v3 Cicer arietinum L. HOM05D007748 ORTHO05D009345 1.8e-14 84.7 461 26.7
FAN05G3025 Fragaria x ananassa HOM05D007748 ORTHO05D009345 1.8e-14 84.7 486 27.4
Gohir.D02G182800 Gossypium hirsutum HOM05D007748 ORTHO05D009345 2.4e-14 84.3 519 30.6
FAN14G2142 Fragaria x ananassa HOM05D007748 ORTHO05D009345 9.1e-14 82.4 486 27.4
Aqoxy1G02767 Aquilegia oxysepala HOM05D007748 ORTHO05D009345 1.2e-13 82.0 166 33.7
arahy.Tifrunner.gnm1.ann1.SX3Q91 Arachis hypogaea HOM05D007748 ORTHO05D009345 2.0e-13 81.3 477 29.4
Glyma.06G297400 Glycine max HOM05D007748 ORTHO05D009345 2.0e-13 81.3 462 32.0
FvH4_6g44840 Fragaria vesca HOM05D007748 ORTHO05D009345 3.5e-13 80.5 486 27.0
PGR142G1582 Punica granatum HOM05D007748 ORTHO05D009345 4.5e-13 80.1 152 36.8
CiPaw.03G170600 Carya illinoinensis HOM05D007748 ORTHO05D009345 5.9e-13 79.7 226 34.5
RcHm_v2.0_Chr2g0162021 Rosa chinensis HOM05D007748 ORTHO05D009345 5.9e-13 79.7 512 27.0
Dinv23701 Davidia involucrata HOM05D007748 ORTHO05D009345 7.7e-13 79.3 260 40.0
Atru.chr6.3057 Acer truncatum HOM05D007748 ORTHO05D009345 1.3e-12 78.6 251 33.9
arahy.Tifrunner.gnm1.ann1.MF6V35 Arachis hypogaea HOM05D007748 ORTHO05D009345 2.9e-12 77.4 89 48.3
Medtr4g046037 Medicago truncatula HOM05D007748 ORTHO05D009345 2.9e-12 77.4 451 27.1
Lalb_Chr03g0029211 Lupinus albus HOM05D007748 ORTHO05D009345 3.8e-12 77.0 522 34.1
TPR.G21671 Trifolium pratense HOM05D007748 ORTHO05D009345 3.8e-12 77.0 485 26.4
Sopen07g028340 Solanum pennellii HOM05D012354 ORTHO05D009345 5.0e-12 76.6 385 34.3
Nitab4.5_0005244g0030 Nicotiana tabacum HOM05D012354 ORTHO05D009345 1.9e-11 74.7 250 34.0
arahy.Tifrunner.gnm1.ann1.2C7EMU Arachis hypogaea HOM05D007748 ORTHO05D009345 2.5e-11 74.3 88 46.6
TAR627G0547 Trochodendron aralioides HOM05D007748 ORTHO05D009345 1.6e-10 71.6 394 37.8
PGR142G3499 Punica granatum HOM05D007748 ORTHO05D009345 2.1e-10 71.2 441 29.7
PSO675G9319 Papaver somniferum HOM05D007748 ORTHO05D009345 2.7e-10 70.9 441 26.1
Peaxi162Scf00485g00412 Petunia axillaris HOM05D012354 ORTHO05D009345 1.0e-09 68.9 345 38.3
Psat7g197200 Pisum sativum HOM05D007748 ORTHO05D009345 1.0e-09 68.9 378 25.7
VMungo1127G2014 Vigna mungo HOM05D007748 ORTHO05D009345 1.0e-09 68.9 460 25.0
Sabra19G0138300 Salix brachista HOM05D007748 ORTHO05D009345 1.8e-09 68.2 123 37.4
PSO541G5470 Papaver somniferum HOM05D007748 ORTHO05D009345 8.8e-09 65.9 439 26.9
Actinidia09898 Actinidia chinensis HOM05D007748 ORTHO05D009345 1.5e-08 65.1 474 32.9
Nn1g06734 Nelumbo nucifera HOM05D007748 ORTHO05D009345 2.0e-08 64.7 52 63.5
Sabra19G0115100 Salix brachista HOM05D007748 ORTHO05D009345 2.0e-08 64.7 52 63.5
Solyc12g005560.1 Solanum lycopersicum HOM05D012354 ORTHO05D009345 2.0e-08 64.7 79 46.8
Potri.019G109200 Populus trichocarpa HOM05D007748 ORTHO05D009345 2.6e-08 64.3 327 37.9
Glyma.12G107600 Glycine max HOM05D007748 ORTHO05D009345 4.4e-08 63.5 527 23.9
Zm00001eb069210 Zea mays HOM05D007748 ORTHO05D009345 4.4e-08 63.5 76 44.7
Peaxi162Scf00132g00079 Petunia axillaris HOM05D012354 ORTHO05D009345 5.7e-08 63.2 477 29.6
Prupe.3G232500 Prunus persica HOM05D007748 ORTHO05D009345 1.7e-07 61.6 531 24.7
Zm00001eb431720 Zea mays HOM05D007748 ORTHO05D009345 2.2e-07 61.2 76 43.4
Actinidia12452 Actinidia chinensis HOM05D007748 ORTHO05D009345 2.8e-07 60.8 457 31.9
Gorai.005G205200 Gossypium raimondii HOM05D007748 ORTHO05D009345 8.3e-07 59.3 519 30.8
TAR627G0096 Trochodendron aralioides HOM05D007748 ORTHO05D009345 4.1e-06 57.0 453 33.6
Hma1.2p1_0565F.1_g179400 Hydrangea macrophylla HOM05D007748 ORTHO05D009345 9.1e-06 55.8 443 27.8


User provided reference genes

Program Settings