Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.3e-246 855.9 424 100.0
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 3.2e-221 771.5 481 82.7
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 4.4e-218 761.1 481 80.2
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.2e-217 758.8 481 80.0
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.0e-215 752.3 481 79.2
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 3.5e-215 751.5 481 78.4
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 2.3e-214 748.8 481 78.0
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.8e-214 748.0 481 78.0
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 8.6e-214 746.9 481 78.2
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.9e-213 745.7 481 76.5
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.5e-213 745.3 481 77.8
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 5.6e-213 744.2 480 79.2
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 3.6e-212 741.5 481 77.5
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 3.6e-212 741.5 481 78.0
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 3.6e-212 741.5 481 77.8
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 4.7e-212 741.1 481 77.1
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 6.1e-212 740.7 481 76.5
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.1e-212 740.7 480 77.9
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 8.0e-212 740.3 481 77.8
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 8.0e-212 740.3 486 77.2
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 4.0e-211 738.0 481 77.5
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 5.2e-211 737.6 481 77.5
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 5.2e-211 737.6 485 79.2
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 6.8e-211 737.3 481 78.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 8.9e-211 736.9 479 77.9
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 8.9e-211 736.9 481 77.1
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.2e-210 736.5 481 77.3
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 2.0e-210 735.7 476 77.3
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.6e-210 735.3 481 77.1
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.4e-210 734.9 480 78.8
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 4.4e-210 734.6 481 76.7
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 5.7e-210 734.2 481 76.7
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 5.7e-210 734.2 481 77.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 5.7e-210 734.2 480 78.5
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 5.7e-210 734.2 480 77.3
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 7.5e-210 733.8 480 76.7
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 7.5e-210 733.8 474 77.8
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 9.8e-210 733.4 481 77.3
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.3e-209 733.0 476 77.1
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 1.7e-209 732.6 481 77.1
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 2.2e-209 732.3 480 77.1
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.9e-209 731.9 481 76.7
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 2.9e-209 731.9 481 76.7
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.9e-209 731.1 480 77.7
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 8.3e-209 730.3 481 78.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 8.3e-209 730.3 481 76.3
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 1.4e-208 729.6 481 76.5
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.8e-208 729.2 481 77.5
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.8e-208 729.2 477 77.4
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 2.4e-208 728.8 481 77.3
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 5.4e-208 727.6 476 77.1
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 5.4e-208 727.6 480 78.3
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 5.4e-208 727.6 480 75.6
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 7.0e-208 727.2 481 77.3
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 7.0e-208 727.2 480 77.5
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 9.2e-208 726.9 480 76.5
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 9.2e-208 726.9 479 76.6
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 9.2e-208 726.9 480 76.7
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 9.2e-208 726.9 480 76.7
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.2e-207 726.5 474 77.0
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.6e-207 726.1 480 77.1
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.0e-207 725.7 479 77.0
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 2.0e-207 725.7 481 77.5
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 3.5e-207 724.9 480 76.7
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.3e-206 723.0 481 77.3
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.3e-206 723.0 475 76.8
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 3.0e-206 721.8 481 77.5
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 3.0e-206 721.8 480 76.0
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 3.9e-206 721.5 481 77.3
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 5.0e-206 721.1 481 77.5
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 6.6e-206 720.7 481 77.3
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 8.6e-206 720.3 480 75.8
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 8.6e-206 720.3 483 76.8
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.1e-205 719.9 482 77.2
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 1.5e-205 719.5 481 77.1
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.5e-205 719.5 481 77.1
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.5e-205 718.8 480 76.7
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 3.3e-205 718.4 468 78.6
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.3e-205 718.4 468 78.6
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 4.3e-205 718.0 481 77.1
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 4.3e-205 718.0 481 77.1
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 4.3e-205 718.0 474 76.2
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 5.6e-205 717.6 470 78.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 5.6e-205 717.6 480 77.3
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 7.3e-205 717.2 474 76.2
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 7.3e-205 717.2 477 75.9
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 9.5e-205 716.8 481 77.1
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 9.5e-205 716.8 481 77.1
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 9.5e-205 716.8 482 76.1
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.2e-204 716.5 481 76.7
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.6e-204 716.1 483 77.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 2.1e-204 715.7 470 77.9
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 2.1e-204 715.7 460 80.2
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 2.8e-204 715.3 479 75.4
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 2.8e-204 715.3 481 76.7
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 3.6e-204 714.9 480 75.4
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 4.7e-204 714.5 483 77.0
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 6.2e-204 714.1 437 80.1
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 8.0e-204 713.8 437 79.6
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 2.3e-203 712.2 479 75.4
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 5.2e-203 711.1 483 77.4
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 8.9e-203 710.3 474 75.7
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 2.0e-202 709.1 452 79.0
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 9.8e-202 706.8 480 74.8
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 6.4e-201 704.1 436 78.9
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 1.4e-200 703.0 480 75.4
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 3.2e-200 701.8 480 75.2
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 2.3e-198 695.7 476 75.8
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 7.3e-197 690.6 436 77.3
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 6.2e-196 687.6 454 76.7
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 4.9e-193 677.9 436 76.1
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.1e-192 676.8 466 75.1
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.1e-192 676.8 430 77.0
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.1e-192 676.8 430 77.2
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 4.1e-192 674.9 433 75.1
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 6.0e-191 671.0 434 74.4
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 3.3e-189 665.2 431 74.2
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 6.8e-187 657.5 408 79.2
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 8.4e-185 650.6 407 78.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.1e-184 650.2 407 77.9
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 7.8e-183 644.0 406 77.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 3.0e-182 642.1 405 77.3
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.9e-182 641.7 384 81.2
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 3.6e-180 635.2 433 72.1
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 7.1e-176 620.9 395 78.7
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 3.0e-174 615.5 420 70.0
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 3.6e-172 608.6 479 67.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 3.6e-172 608.6 436 68.8
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.4e-171 606.7 427 68.4
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.7e-167 592.4 387 78.0
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.4e-155 553.5 322 82.3
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.8e-147 526.6 363 75.2
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-140 503.8 468 60.7
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 3.7e-140 502.3 334 76.9
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 2.4e-139 499.6 395 61.3
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.5e-138 496.9 315 77.8
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.9e-137 492.7 450 61.8
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.4e-136 490.3 451 61.6
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.8e-134 481.1 450 61.1
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.4e-123 447.2 279 77.8
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.1e-115 419.5 339 65.8
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.0e-90 335.5 203 81.3
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.1e-88 331.3 259 60.2
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.7e-76 289.7 190 75.3
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-74 284.6 189 73.0
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.2e-67 260.0 172 75.6
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 6.6e-65 252.3 171 73.7
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.6e-58 229.6 452 36.3
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.1e-54 218.4 146 73.3
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.9e-52 210.3 136 82.4
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 9.3e-51 205.3 127 78.7
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.6e-50 204.5 146 71.2
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 3.5e-50 203.4 124 76.6
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.3e-48 196.4 100 90.0
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 5.3e-46 189.5 141 77.3
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 4.3e-40 169.9 100 81.0
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.0e-37 161.0 230 38.7
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 9.3e-35 152.1 121 68.6
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.2e-21 108.6 102 57.8
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.5e-21 108.2 84 63.1
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 1.0e-20 105.5 77 68.8
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 1.0e-20 105.5 77 68.8
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.6e-18 98.2 128 46.1
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.3e-16 90.5 48 81.2
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.3e-16 90.5 48 81.2
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 4.4e-16 90.1 47 89.4
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-15 87.8 47 85.1
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.8e-15 86.7 48 81.2
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.3e-15 86.3 47 83.0
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.3e-15 86.3 47 83.0
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.1e-14 82.4 44 81.8
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.3e-12 78.6 67 56.7
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 8.5e-12 75.9 65 61.5
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 5.7e-08 63.2 168 32.1
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 9.7e-08 62.4 68 50.0
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 1.3e-07 62.0 65 47.7
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 4.8e-07 60.1 69 49.3
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 3.1e-06 57.4 69 47.8


User provided reference genes

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