Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024797 Sechium edule HOM05D000002 ORTHO05D000001 6.2e-64 247.3 123 100.0
ClCG11G009880 Citrullus lanatus HOM05D006073 ORTHO05D007354 8.4e-29 130.6 81 75.3
ClCG01G011630 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.1e-25 120.2 90 63.3
Sed0025241 Sechium edule HOM05D000002 ORTHO05D000001 1.9e-25 119.4 114 54.4
ClCG08G001120 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.7e-24 115.2 125 49.6
ClCG08G002140 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.2e-22 110.2 81 64.2
ClCG05G012250 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.5e-22 108.2 109 52.3
ClCG04G011870 Citrullus lanatus HOM05D000002 ORTHO05D000001 6.5e-21 104.4 117 50.4
ClCG08G001770 Citrullus lanatus HOM05D000002 ORTHO05D000001 6.5e-21 104.4 116 50.0
ClCG11G006400 Citrullus lanatus HOM05D007933 ORTHO05D000001 2.2e-16 89.4 60 70.0
ClCG01G014520 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.4e-14 82.0 111 42.3
ClCG05G012400 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.4e-14 82.0 66 60.6
Sed0018564 Sechium edule HOM05D007933 ORTHO05D000001 7.7e-14 80.9 117 41.9
CANSAT56G4524 Cannabis sativa HOM05D007933 ORTHO05D000001 1.3e-13 80.1 112 39.3
ClCG03G014130 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.8e-13 78.6 51 72.5
ClCG04G001080 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.8e-13 78.6 98 43.9
ClCG07G008600 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.4e-12 76.6 44 79.5
Sed0022044 Sechium edule HOM05D007933 ORTHO05D000001 4.2e-12 75.1 81 50.6
ClCG00G005080 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.2e-12 74.3 89 49.4
ClCG06G009890 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.2e-12 74.3 89 49.4
ClCG05G013230 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.2e-11 73.6 119 42.0
ClCG06G011650 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.2e-11 73.6 76 50.0
ClCG11G007270 Citrullus lanatus HOM05D007933 ORTHO05D000001 4.7e-11 71.6 74 48.6
ClCG08G006140 Citrullus lanatus HOM05D000002 ORTHO05D000001 6.1e-11 71.2 71 53.5
Sed0024358 Sechium edule HOM05D007933 ORTHO05D000001 1.4e-10 70.1 56 57.1
ClCG05G015920 Citrullus lanatus HOM05D058504 ORTHO05D000001 3.9e-10 68.6 56 57.1
ClCG09G016870 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.1e-10 68.2 64 53.1
TPR.G529 Trifolium pratense HOM05D007933 ORTHO05D000001 6.7e-10 67.8 75 44.0
Atru.chr3.1163 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-09 67.0 89 40.4
ClCG02G008950 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.1e-09 67.0 75 45.3
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 1.1e-09 67.0 123 36.6
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-09 66.6 70 42.9
TPR.G36530 Trifolium pratense HOM05D007933 ORTHO05D000001 1.5e-09 66.6 75 42.7
ClCG02G007470 Citrullus lanatus HOM05D007933 ORTHO05D000001 2.0e-09 66.2 59 52.5
MELO3C011560.2 Cucumis melo HOM05D007933 ORTHO05D000001 2.6e-09 65.9 77 41.6
MELO3C025171.2 Cucumis melo HOM05D007933 ORTHO05D000001 2.6e-09 65.9 61 50.8
TPR.G14505 Trifolium pratense HOM05D007933 ORTHO05D010776 3.3e-09 65.5 74 41.9
ClCG03G011920 Citrullus lanatus HOM05D007933 ORTHO05D000001 4.4e-09 65.1 42 69.0
Psat0s3652g0040 Pisum sativum HOM05D000002 ORTHO05D010776 9.7e-09 63.9 75 38.7
TPR.G833 Trifolium pratense HOM05D000002 ORTHO05D000001 9.7e-09 63.9 75 38.7
ClCG05G012350 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.7e-08 63.2 49 57.1
ClCG05G014660 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.7e-08 63.2 72 47.2
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-08 63.2 77 40.3
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 3.7e-08 62.0 86 41.9
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-08 61.6 70 40.0
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 8.2e-08 60.8 88 39.8
ClCG08G000480 Citrullus lanatus HOM05D000002 ORTHO05D000001 8.2e-08 60.8 41 68.3
Psat0s3746g0040 Pisum sativum HOM05D000002 ORTHO05D010776 1.1e-07 60.5 69 43.5
Nitab4.5_0000342g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.4e-07 60.1 64 40.6
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-07 59.7 91 36.3
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-07 59.7 86 43.0
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-07 59.7 77 36.4
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 2.4e-07 59.3 69 44.9
Cpa.g.sc47.46 Carica papaya HOM05D012279 ORTHO05D000001 2.4e-07 59.3 103 33.0
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-07 59.3 72 41.7
Sed0002532 Sechium edule HOM05D007933 ORTHO05D000001 2.4e-07 59.3 54 51.9
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.4e-07 59.3 124 33.1
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-07 59.3 70 38.6
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-07 58.9 72 41.7
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 4.1e-07 58.5 81 34.6
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 4.1e-07 58.5 81 34.6
Psat2g045800 Pisum sativum HOM05D000002 ORTHO05D010776 4.1e-07 58.5 76 39.5
Atru.chr5.1209 Acer truncatum HOM05D000002 ORTHO05D000001 5.3e-07 58.2 76 35.5
ClCG01G014270 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.3e-07 58.2 32 81.2
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 5.3e-07 58.2 70 40.0
FvH4_4g05782 Fragaria vesca HOM05D000002 ORTHO05D000001 7.0e-07 57.8 73 34.2
FvH4_4g05872 Fragaria vesca HOM05D000002 ORTHO05D000001 7.0e-07 57.8 73 34.2
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 9.1e-07 57.4 70 38.6
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-06 57.0 82 35.4
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 56.6 76 35.5
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 1.5e-06 56.6 72 41.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 2.0e-06 56.2 75 37.3
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.6e-06 55.8 91 33.0
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 2.6e-06 55.8 101 33.7
MELO3C010447.2 Cucumis melo HOM05D007933 ORTHO05D000001 3.4e-06 55.5 99 34.3
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-06 54.7 78 41.0
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.9e-06 54.7 75 33.3
CANSAT01G0981 Cannabis sativa HOM05D007933 ORTHO05D000001 7.7e-06 54.3 79 38.0
Hma1.2p1_0198F.1_g085460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-06 54.3 78 37.2


User provided reference genes

Program Settings