Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 6.4e-88 327.4 168 100.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 3.8e-72 275.0 169 83.4
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 8.7e-69 263.8 170 82.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.1e-68 263.5 170 82.4
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.7e-68 261.2 170 82.4
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.8e-59 232.3 174 75.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 6.9e-58 227.6 173 72.3
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.2e-57 226.9 174 70.1
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.9e-56 222.2 164 72.0
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.5e-55 219.2 178 70.2
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 5.5e-55 218.0 178 70.2
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 9.4e-55 217.2 176 67.0
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.2e-54 216.9 169 69.2
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.2e-54 216.9 170 68.2
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.6e-54 215.3 170 67.6
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 4.6e-54 214.9 176 68.2
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 6.1e-54 214.5 171 67.8
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 7.9e-54 214.2 175 69.1
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.0e-53 213.8 176 65.9
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.0e-53 213.8 176 65.9
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.0e-53 213.8 182 67.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.8e-53 213.0 173 68.8
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.8e-53 213.0 173 68.8
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.3e-53 212.6 180 66.1
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.0e-53 212.2 181 68.5
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.0e-53 212.2 181 68.0
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 5.1e-53 211.5 181 67.4
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.1e-53 211.5 175 67.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 8.8e-53 210.7 175 67.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.8e-53 210.7 175 67.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 8.8e-53 210.7 174 66.7
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.5e-52 209.9 175 66.3
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 2.0e-52 209.5 177 68.4
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 3.3e-52 208.8 177 67.2
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 5.7e-52 208.0 181 66.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 5.7e-52 208.0 177 65.5
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 7.4e-52 207.6 173 67.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 9.7e-52 207.2 175 65.7
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 178 67.4
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.3e-51 206.8 174 65.5
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 63.8
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.7e-51 206.5 174 66.1
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.8e-51 205.7 180 66.7
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 2.8e-51 205.7 174 64.4
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 2.8e-51 205.7 178 64.0
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.7e-51 205.3 178 65.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 3.7e-51 205.3 173 67.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.7e-51 205.3 175 66.3
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 3.7e-51 205.3 175 66.3
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.8e-51 204.9 178 65.2
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 4.8e-51 204.9 179 62.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 4.8e-51 204.9 179 62.6
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.3e-51 204.5 182 61.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.3e-51 204.5 174 64.9
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 8.2e-51 204.1 178 65.7
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.1e-50 203.8 172 68.6
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.4e-50 203.4 186 62.4
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.4e-50 203.4 133 80.5
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.8e-50 203.0 175 66.9
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 6.9e-50 201.1 176 64.8
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.1e-50 200.7 179 64.2
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.2e-49 200.3 179 64.2
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.5e-49 199.9 173 66.5
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.6e-49 199.1 175 64.0
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 4.5e-49 198.4 174 63.2
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 4.5e-49 198.4 171 64.3
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 4.5e-49 198.4 172 64.5
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 4.5e-49 198.4 175 63.4
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 4.5e-49 198.4 180 62.2
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.9e-49 198.0 176 65.3
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 7.7e-49 197.6 160 69.4
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 7.7e-49 197.6 177 63.3
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.0e-48 197.2 174 65.5
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.3e-48 196.8 174 63.2
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.3e-48 196.8 161 67.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.3e-48 196.8 178 62.4
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.3e-48 196.8 178 65.2
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.7e-48 196.4 169 63.9
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.7e-48 196.4 174 62.6
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 2.2e-48 196.1 175 62.9
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 2.9e-48 195.7 170 62.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 3.8e-48 195.3 166 65.7
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 3.8e-48 195.3 176 63.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 5.0e-48 194.9 180 63.3
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 6.5e-48 194.5 177 61.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.5e-48 194.5 137 74.5
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 6.5e-48 194.5 177 61.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.5e-48 194.5 137 74.5
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.1e-47 193.7 175 63.4
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.1e-47 193.7 175 62.3
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.1e-47 193.7 136 72.8
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.4e-47 193.4 136 73.5
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.9e-47 193.0 130 77.7
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.5e-47 192.6 175 64.6
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 7.2e-47 191.0 182 63.2
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 7.2e-47 191.0 181 62.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.4e-47 190.7 175 64.0
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 9.4e-47 190.7 140 72.1
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.6e-46 189.9 129 76.7
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 2.1e-46 189.5 179 60.3
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.6e-46 188.7 181 61.3
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.6e-46 188.7 116 82.8
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.0e-45 187.2 171 62.6
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 3.0e-45 185.7 179 60.9
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 5.1e-45 184.9 177 59.9
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 5.1e-45 184.9 103 90.3
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.5e-44 183.3 114 80.7
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.0e-44 183.0 175 60.0
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.0e-44 183.0 133 73.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.3e-44 182.2 170 60.0
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 9.7e-44 180.6 146 67.1
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 4.8e-43 178.3 133 72.2
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.1e-42 177.2 182 56.6
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-38 163.3 164 60.4
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 5.2e-37 158.3 152 57.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.7e-35 153.3 139 63.3
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 2.0e-33 146.4 85 84.7
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.9e-31 139.8 137 53.3
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.6e-30 136.7 144 51.4
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 2.7e-30 136.0 141 51.8
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 2.2e-27 126.3 145 49.7
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.8e-27 125.9 112 57.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 6.3e-27 124.8 137 50.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 9.1e-26 120.9 129 57.4
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 8.0e-22 107.8 143 42.7
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 4.4e-20 102.1 150 40.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.7e-16 90.1 97 52.6
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.5e-15 87.0 170 39.4
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.5e-09 65.9 152 27.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.3e-07 59.3 98 29.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 9.5e-07 57.8 100 30.0
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.2e-06 57.4 147 26.5
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.6e-06 57.0 143 27.3
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 2.1e-06 56.6 115 27.8
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.1e-06 56.6 98 29.6
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.1e-06 56.6 98 30.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 2.8e-06 56.2 98 29.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.8e-06 56.2 98 29.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.6e-06 55.8 98 29.6
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 3.6e-06 55.8 154 24.0
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 4.7e-06 55.5 98 27.6
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.7e-06 55.5 98 29.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 4.7e-06 55.5 122 27.9
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 6.2e-06 55.1 115 27.0
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 8.0e-06 54.7 115 27.0


User provided reference genes

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