Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 1.4e-100 369.8 212 100.0
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 3.2e-44 182.6 186 66.7
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 2.5e-36 156.4 271 48.0
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 6.7e-34 148.3 281 46.3
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 1.3e-32 144.1 110 60.9
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 1.8e-31 140.2 96 70.8
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 5.3e-31 138.7 116 62.9
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 7.0e-31 138.3 220 44.1
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 4.5e-30 135.6 115 62.6
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 3.8e-29 132.5 101 61.4
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 6.5e-29 131.7 101 60.4
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 8.5e-29 131.3 101 57.4
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 1.1e-28 131.0 101 58.4
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 2.5e-28 129.8 101 57.4
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 4.2e-28 129.0 92 66.3
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 9.4e-28 127.9 228 43.0
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 1.2e-27 127.5 205 44.4
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.2e-27 127.5 210 40.5
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 4.7e-27 125.6 135 54.1
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 6.1e-27 125.2 106 57.5
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 6.1e-27 125.2 100 56.0
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 6.1e-27 125.2 97 61.9
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 6.1e-27 125.2 96 63.5
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 8.0e-27 124.8 149 49.7
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 1.0e-26 124.4 144 49.3
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 1.4e-26 124.0 204 45.6
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 1.4e-26 124.0 104 56.7
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 1.4e-26 124.0 102 59.8
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 1.4e-26 124.0 106 58.5
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 1.8e-26 123.6 124 54.0
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 5.2e-26 122.1 103 57.3
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 6.8e-26 121.7 94 64.9
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 6.8e-26 121.7 147 46.9
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 8.8e-26 121.3 126 54.0
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 1.2e-25 120.9 98 60.2
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 4.4e-25 119.0 101 56.4
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 5.7e-25 118.6 204 47.5
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 7.5e-25 118.2 88 63.6
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 9.8e-25 117.9 129 51.9
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 6.3e-24 115.2 90 62.2
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 8.3e-24 114.8 104 54.8
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 8.3e-24 114.8 132 50.0
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 1.1e-23 114.4 162 40.7
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 1.4e-23 114.0 97 56.7
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 1.4e-23 114.0 100 55.0
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.8e-23 113.6 115 52.2
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 4.1e-23 112.5 121 49.6
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 5.4e-23 112.1 103 53.4
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 7.0e-23 111.7 211 42.2
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 1.2e-22 110.9 92 60.9
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 2.0e-22 110.2 136 46.3
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 3.5e-22 109.4 149 43.6
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 3.5e-22 109.4 91 58.2
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.5e-22 109.0 126 48.4
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 7.7e-22 108.2 95 51.6
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 1.0e-21 107.8 95 51.6
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 2.9e-21 106.3 105 53.3
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 3.8e-21 105.9 99 52.5
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 3.8e-21 105.9 96 54.2
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 3.8e-21 105.9 116 47.4
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 1.1e-20 104.4 151 42.4
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 2.5e-20 103.2 102 51.0
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 3.2e-20 102.8 144 45.1
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 3.2e-20 102.8 157 43.3
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 3.2e-20 102.8 157 43.3
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 4.2e-20 102.4 132 44.7
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 7.2e-20 101.7 147 45.6
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 1.6e-19 100.5 208 38.0
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 2.1e-19 100.1 160 40.6
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 2.7e-19 99.8 132 46.2
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 2.7e-19 99.8 131 46.6
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 3.6e-19 99.4 156 39.7
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 3.6e-19 99.4 208 37.5
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 6.1e-19 98.6 187 36.4
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 6.1e-19 98.6 101 50.5
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 8.0e-19 98.2 159 42.1
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 1.4e-18 97.4 217 35.5
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 1.8e-18 97.1 162 42.0
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.8e-18 97.1 159 41.5
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 2.3e-18 96.7 121 45.5
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 2.3e-18 96.7 201 36.3
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 3.0e-18 96.3 209 36.4
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 8.8e-18 94.7 96 45.8
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 1.2e-17 94.4 139 38.8
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 1.5e-17 94.0 221 34.8
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 2.0e-17 93.6 186 36.0
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 2.0e-17 93.6 186 36.0
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 7.5e-17 91.7 96 53.1
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.3e-16 90.9 147 36.7
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 4.9e-16 89.0 59 64.4
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 1.8e-15 87.0 122 41.8
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 4.1e-15 85.9 86 52.3
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 7.0e-15 85.1 203 31.5
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 3.5e-14 82.8 153 37.3
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 7.7e-14 81.6 153 38.6
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 1.0e-13 81.3 81 54.3
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 9.5e-12 74.7 170 34.7
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.8e-10 70.5 65 52.3
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 5.2e-10 68.9 66 56.1
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 5.2e-10 68.9 66 45.5
Zm00001eb064730 Zea mays HOM05D007207 ORTHO05D009041 1.2e-09 67.8 125 35.2
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 2.0e-09 67.0 80 37.5
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 4.4e-09 65.9 73 46.6
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 2.2e-08 63.5 105 35.2
Mapoly0168s0007 Marchantia polymorpha HOM05D007207 ORTHO05D009041 6.4e-08 62.0 93 33.3
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 3.2e-07 59.7 89 32.6
Pp3c17_12030 Physcomitrium patens HOM05D007207 ORTHO05D009041 4.1e-07 59.3 150 30.0


User provided reference genes

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