Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024730 Sechium edule HOM05D000063 ORTHO05D050841 1.5e-110 402.9 204 100.0
MELO3C005834.2 Cucumis melo HOM05D000063 ORTHO05D004572 4.6e-32 142.1 190 50.5
CsaV3_5G001120 Cucumis sativus L. HOM05D000063 ORTHO05D004572 1.0e-31 141.0 190 50.0
ClCG01G000970 Citrullus lanatus HOM05D000063 ORTHO05D004572 7.4e-30 134.8 189 49.2
Sed0005314 Sechium edule HOM05D000063 ORTHO05D004572 1.7e-29 133.7 189 48.1
FAN01G1449 Fragaria x ananassa HOM05D000063 ORTHO05D004572 4.5e-19 99.0 224 32.6
Gohir.D09G043300 Gossypium hirsutum HOM05D000063 ORTHO05D004572 5.9e-19 98.6 186 39.2
Gorai.006G050200 Gossypium raimondii HOM05D000063 ORTHO05D004572 5.9e-19 98.6 186 39.2
CSS0037839 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D004572 1.3e-18 97.4 192 37.0
FAN10G0358 Fragaria x ananassa HOM05D000063 ORTHO05D004572 1.7e-18 97.1 224 32.6
Duzib205G1487 Durio zibethinus HOM05D000063 ORTHO05D004572 2.9e-18 96.3 196 38.8
Thecc.03G182300 Theobroma cacao HOM05D000063 ORTHO05D004572 5.0e-18 95.5 194 37.6
FAN10G4228 Fragaria x ananassa HOM05D000063 ORTHO05D004572 8.5e-18 94.7 224 32.1
FvH4_7g30100 Fragaria vesca HOM05D000063 ORTHO05D004572 1.5e-17 94.0 208 33.2
FAN03G2320 Fragaria x ananassa HOM05D000063 ORTHO05D004572 1.5e-17 94.0 207 32.9
FAN06G2945 Fragaria x ananassa HOM05D000063 ORTHO05D004572 1.5e-17 94.0 208 32.7
FAN06G5047 Fragaria x ananassa HOM05D000063 ORTHO05D004572 3.2e-17 92.8 208 32.2
FAN03G2405 Fragaria x ananassa HOM05D000063 ORTHO05D004572 5.5e-17 92.0 207 32.4
COL.COLO4_28017 Corchorus olitorius HOM05D000063 ORTHO05D004572 7.2e-17 91.7 183 37.7
Prupe.2G299400 Prunus persica HOM05D000063 ORTHO05D004572 7.2e-17 91.7 225 34.2
CAN.G236.9 Capsicum annuum HOM05D000063 ORTHO05D004572 1.2e-16 90.9 222 33.8
Gohir.A09G042600 Gossypium hirsutum HOM05D000063 ORTHO05D004572 1.2e-16 90.9 186 37.6
Nitab4.5_0016470g0010 Nicotiana tabacum HOM05D000063 ORTHO05D004572 1.6e-16 90.5 196 36.2
RcHm_v2.0_Chr1g0378081 Rosa chinensis HOM05D000063 ORTHO05D004572 3.6e-16 89.4 192 35.4
Atru.chr1.388 Acer truncatum HOM05D000063 ORTHO05D004572 4.7e-16 89.0 191 37.2
Actinidia34146 Actinidia chinensis HOM05D000063 ORTHO05D004572 1.0e-15 87.8 171 40.4
Actinidia20865 Actinidia chinensis HOM05D000063 ORTHO05D004572 1.8e-15 87.0 225 34.2
PGSC0003DMG400010121 Solanum tuberosum HOM05D000063 ORTHO05D004572 1.8e-15 87.0 230 32.2
Gohir.A11G011600 Gossypium hirsutum HOM05D000063 ORTHO05D004572 2.3e-15 86.7 185 36.8
Nitab4.5_0000572g0020 Nicotiana tabacum HOM05D000063 ORTHO05D004572 3.0e-15 86.3 186 36.0
Atru.chr1.374 Acer truncatum HOM05D000063 ORTHO05D004572 5.2e-15 85.5 191 36.6
Gorai.006G198300 Gossypium raimondii HOM05D000063 ORTHO05D004572 5.2e-15 85.5 217 33.2
Manes.14G023500 Manihot esculenta HOM05D000063 ORTHO05D004572 6.7e-15 85.1 179 35.2
Duzib068G0790 Durio zibethinus HOM05D000063 ORTHO05D004572 8.8e-15 84.7 185 36.8
Gohir.D09G176100 Gossypium hirsutum HOM05D000063 ORTHO05D004572 1.5e-14 84.0 217 32.7
MD07G1277400 Malus domestica HOM05D000063 ORTHO05D004572 1.5e-14 84.0 216 33.3
Gorai.007G012300 Gossypium raimondii HOM05D000063 ORTHO05D004572 2.0e-14 83.6 185 35.7
Sabra04G0052300 Salix brachista HOM05D000063 ORTHO05D004572 2.0e-14 83.6 172 36.6
Peaxi162Scf00444g00001 Petunia axillaris HOM05D000063 ORTHO05D004572 3.3e-14 82.8 223 36.3
Potri.004G078800 Populus trichocarpa HOM05D000063 ORTHO05D004572 3.3e-14 82.8 174 37.4
Sopen03g004020 Solanum pennellii HOM05D000063 ORTHO05D004572 3.3e-14 82.8 176 38.1
Haze_00031 Corylus avellana HOM05D000063 ORTHO05D004572 4.4e-14 82.4 178 34.3
DCAR_010666 Daucus carota HOM05D000063 ORTHO05D004572 4.4e-14 82.4 165 37.0
Sed0017534 Sechium edule HOM05D000063 ORTHO05D050841 4.4e-14 82.4 50 86.0
Solyc03g025170.1 Solanum lycopersicum HOM05D000063 ORTHO05D004572 5.7e-14 82.0 176 37.5
C02p19610 Brassica napus HOM05D000063 ORTHO05D004572 7.5e-14 81.6 176 34.1
MSTRG.8472 Avicennia marina HOM05D000063 ORTHO05D004572 9.7e-14 81.3 175 38.3
Dinv28398 Davidia involucrata HOM05D000063 ORTHO05D004572 9.7e-14 81.3 201 36.8
MD01G1206800 Malus domestica HOM05D000063 ORTHO05D004572 9.7e-14 81.3 224 33.9
Manes.06G151400 Manihot esculenta HOM05D000063 ORTHO05D004572 1.3e-13 80.9 177 35.6
Cfa016277 Carpinus fangiana HOM05D000063 ORTHO05D004572 2.2e-13 80.1 178 34.8
Migut.F00310 Erythranthe guttata HOM05D000063 ORTHO05D004572 2.8e-13 79.7 192 35.4
Rhsim03G0189900 Rhododendron simsii HOM05D000063 ORTHO05D004572 2.8e-13 79.7 207 36.7
PGSC0003DMG400029921 Solanum tuberosum HOM05D000063 ORTHO05D004572 3.7e-13 79.3 170 34.7
Eucgr.A02754 Eucalyptus grandis HOM05D000063 ORTHO05D004572 4.8e-13 79.0 179 34.1
Migut.F01094 Erythranthe guttata HOM05D000063 ORTHO05D004572 6.3e-13 78.6 178 32.6
Potri.017G142400 Populus trichocarpa HOM05D000063 ORTHO05D004572 6.3e-13 78.6 172 36.0
PGR042G1919 Punica granatum HOM05D000063 ORTHO05D004572 6.3e-13 78.6 200 33.5
MSTRG.77 Avicennia marina HOM05D000063 ORTHO05D004572 8.2e-13 78.2 183 35.0
BolC2t08098H Brassica oleracea HOM05D000063 ORTHO05D004572 1.1e-12 77.8 176 32.4
BcaC03g14525 Brassica carinata HOM05D000063 ORTHO05D004572 1.4e-12 77.4 176 33.0
Hma1.2p1_0327F.1_g126280 Hydrangea macrophylla HOM05D000063 ORTHO05D004572 1.4e-12 77.4 200 35.0
Oeu022603.1 Olea europaea HOM05D000063 ORTHO05D004572 1.4e-12 77.4 172 35.5
A02p11780 Brassica napus HOM05D000063 ORTHO05D004572 1.8e-12 77.0 179 33.0
Cc02_g02540 Coffea canephora HOM05D000063 ORTHO05D004572 1.8e-12 77.0 196 31.1
Lj5g0025817 Lotus japonicus HOM05D000063 ORTHO05D004572 2.4e-12 76.6 181 34.3
Ca_10733_v3 Cicer arietinum L. HOM05D000063 ORTHO05D004572 3.1e-12 76.3 180 35.6
Hma1.2p1_0227F.1_g096110 Hydrangea macrophylla HOM05D000063 ORTHO05D004572 3.1e-12 76.3 178 35.4
SalBow4G2114 Salvia bowleyana HOM05D000063 ORTHO05D004572 4.1e-12 75.9 185 35.1
BcaC04g20583 Brassica carinata HOM05D000063 ORTHO05D004572 5.3e-12 75.5 183 32.2
C09p41890 Brassica napus HOM05D000063 ORTHO05D004572 5.3e-12 75.5 183 32.2
BolC9t57075H Brassica oleracea HOM05D000063 ORTHO05D004572 5.3e-12 75.5 183 32.2
CAN.G527.5 Capsicum annuum HOM05D000063 ORTHO05D004572 5.3e-12 75.5 170 34.7
Solyc06g036170.1 Solanum lycopersicum HOM05D000063 ORTHO05D004572 7.0e-12 75.1 163 36.2
TWI14G0769 Tripterygium wilfordii HOM05D000063 ORTHO05D004572 7.0e-12 75.1 179 35.2
BraA02t06243Z Brassica rapa HOM05D000063 ORTHO05D004572 9.1e-12 74.7 174 31.6
Sabra17G0119300 Salix brachista HOM05D000063 ORTHO05D004572 9.1e-12 74.7 169 34.3
TAR375G0844 Trochodendron aralioides HOM05D000063 ORTHO05D004572 9.1e-12 74.7 172 34.9
HanXRQChr14g0462321 Helianthus annuus HOM05D000063 ORTHO05D004572 1.6e-11 73.9 170 34.7
Peaxi162Scf00848g00031 Petunia axillaris HOM05D000063 ORTHO05D004572 1.6e-11 73.9 174 32.2
ECA238G0522 Erigeron canadensis HOM05D000063 ORTHO05D004572 2.0e-11 73.6 188 31.9
Gohir.D11G010800 Gossypium hirsutum HOM05D000063 ORTHO05D004572 2.0e-11 73.6 182 34.6
vmacro06640 Vaccinium macrocarpon HOM05D000063 ORTHO05D004572 2.0e-11 73.6 196 36.7
Sopen06g011970 Solanum pennellii HOM05D000063 ORTHO05D004572 2.7e-11 73.2 163 35.6
Lalb_Chr19g0130691 Lupinus albus HOM05D000063 ORTHO05D004572 3.5e-11 72.8 177 34.5
MSTRG.8719 Avicennia marina HOM05D000063 ORTHO05D004572 4.5e-11 72.4 176 34.7
Lj2g0000847 Lotus japonicus HOM05D000063 ORTHO05D004572 4.5e-11 72.4 242 31.0
Sp6g14690 Schrenkiella parvula HOM05D000063 ORTHO05D004572 5.9e-11 72.0 191 28.8
CANSAT21G2483 Cannabis sativa HOM05D000063 ORTHO05D004572 7.7e-11 71.6 175 36.0
CANSAT21G0914 Cannabis sativa HOM05D000063 ORTHO05D004572 1.0e-10 71.2 175 34.9
TWI23G0174 Tripterygium wilfordii HOM05D000063 ORTHO05D004572 1.0e-10 71.2 180 34.4
BcaB08g35603 Brassica carinata HOM05D000063 ORTHO05D004572 1.3e-10 70.9 183 30.1
Psat6g196800 Pisum sativum HOM05D000063 ORTHO05D004572 1.3e-10 70.9 180 33.9
TAR629G3249 Trochodendron aralioides HOM05D000063 ORTHO05D004572 1.3e-10 70.9 169 33.7
TAR636G0512 Trochodendron aralioides HOM05D000063 ORTHO05D004572 1.3e-10 70.9 171 34.5
A10p10060 Brassica napus HOM05D000063 ORTHO05D004572 1.7e-10 70.5 185 31.4
BraA10t43088Z Brassica rapa HOM05D000063 ORTHO05D004572 1.7e-10 70.5 185 31.4
Nn6g33341 Nelumbo nucifera HOM05D000063 ORTHO05D004572 1.7e-10 70.5 205 33.7
Cpa.g.sc107.91 Carica papaya HOM05D000063 ORTHO05D004572 2.2e-10 70.1 191 31.9
Ciclev10004502m.g Citrus clementina HOM05D000063 ORTHO05D004572 2.9e-10 69.7 187 33.2
TWI39G0802 Tripterygium wilfordii HOM05D000063 ORTHO05D004572 2.9e-10 69.7 179 34.1
QL09p013155 Quercus lobata HOM05D000063 ORTHO05D004572 3.8e-10 69.3 244 28.7
Aa31LG3G8850 Aethionema arabicum HOM05D000063 ORTHO05D004572 5.0e-10 68.9 176 30.7
Aqoxy7G00257 Aquilegia oxysepala HOM05D000063 ORTHO05D004572 5.0e-10 68.9 183 31.7
Thhalv10012936m.g Eutrema salsugineum HOM05D000063 ORTHO05D004572 6.5e-10 68.6 188 29.8
THA.LOC104811965 Tarenaya hassleriana HOM05D000063 ORTHO05D004572 6.5e-10 68.6 203 28.6
DCAR_009383 Daucus carota HOM05D000063 ORTHO05D004572 1.9e-09 67.0 226 28.8
SGA_v2.0_scaffold44G16744 Striga asiatica HOM05D000063 ORTHO05D004572 2.5e-09 66.6 170 35.3
SalBow2G1091 Salvia bowleyana HOM05D000063 ORTHO05D004572 4.2e-09 65.9 161 32.3
SalBow2G2021 Salvia bowleyana HOM05D000063 ORTHO05D004572 4.2e-09 65.9 161 32.3
Lsat_1_v5_gn_2_131100 Lactuca sativa HOM05D000063 ORTHO05D004572 1.2e-08 64.3 180 31.1
unitig_0.g1754 Utricularia gibba HOM05D000063 ORTHO05D004572 1.6e-08 63.9 214 31.3
AT5G52510 Arabidopsis thaliana HOM05D000063 ORTHO05D004572 4.7e-08 62.4 175 30.9
THA.LOC104800264 Tarenaya hassleriana HOM05D000063 ORTHO05D004572 6.1e-08 62.0 93 39.8
Nn1g01592 Nelumbo nucifera HOM05D000063 ORTHO05D004572 8.0e-08 61.6 170 30.6
MSTRG.27093 Avicennia marina HOM05D000063 ORTHO05D004572 1.0e-07 61.2 172 32.6
MBI11_g11982_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D004572 1.4e-07 60.8 170 32.9
Dinv16681 Davidia involucrata HOM05D000063 ORTHO05D004572 3.0e-07 59.7 138 34.8
unitig_52.g17738 Utricularia gibba HOM05D000063 ORTHO05D004572 4.0e-07 59.3 177 32.8
Eucgr.A00751 Eucalyptus grandis HOM05D000063 ORTHO05D004572 5.2e-07 58.9 83 41.0
Ah.07g206750 Amaranthus hybridus HOM05D000063 ORTHO05D004572 6.8e-07 58.5 93 38.7
Carub.0008s1263 Capsella rubella HOM05D000063 ORTHO05D004572 6.8e-07 58.5 195 28.7
AUR62021138 Chenopodium quinoa HOM05D000063 ORTHO05D004572 1.2e-06 57.8 89 39.3
HanXRQChr07g0206951 Helianthus annuus HOM05D000063 ORTHO05D004572 1.2e-06 57.8 169 31.4
VMungo0720G2240 Vigna mungo HOM05D000063 ORTHO05D004572 1.2e-06 57.8 192 29.2
AUR62031401 Chenopodium quinoa HOM05D000063 ORTHO05D004572 1.5e-06 57.4 89 39.3
ECA233G4965 Erigeron canadensis HOM05D000063 ORTHO05D004572 2.0e-06 57.0 172 32.6
Eucgr.A00766 Eucalyptus grandis HOM05D000063 ORTHO05D004572 2.6e-06 56.6 87 39.1
Phvul.007G073500 Phaseolus vulgaris HOM05D000063 ORTHO05D004572 2.6e-06 56.6 193 28.5
TAR629G0298 Trochodendron aralioides HOM05D000063 ORTHO05D004572 2.6e-06 56.6 90 37.8
BNapus_Darmor_BZH_scaffold_232p00140 Brassica napus HOM05D000063 ORTHO05D004572 3.4e-06 56.2 92 37.0
CDE04G2818 Ceratophyllum demersum HOM05D000063 ORTHO05D004572 4.4e-06 55.8 158 27.8
THA.LOC104825108 Tarenaya hassleriana HOM05D000063 ORTHO05D004572 4.4e-06 55.8 187 27.8
Lsat_1_v5_gn_8_6721 Lactuca sativa HOM05D000063 ORTHO05D004572 5.7e-06 55.5 185 30.8
Glyma.16G179900 Glycine max HOM05D000063 ORTHO05D004572 7.5e-06 55.1 210 31.4
CARHR265480 Cardamine hirsuta HOM05D000063 ORTHO05D004572 9.8e-06 54.7 193 27.5


User provided reference genes

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