Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 2.2e-213 745.3 375 100.0
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.3e-194 682.9 372 91.7
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.5e-193 678.7 372 91.9
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 4.7e-163 578.2 375 75.2
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 3.1e-159 565.5 372 73.9
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 7.7e-158 560.8 373 74.0
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.5e-156 556.6 373 74.5
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 2.1e-155 552.7 368 73.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 3.6e-155 552.0 373 73.2
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 3.0e-154 548.9 370 72.4
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 4.0e-154 548.5 370 72.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 6.7e-154 547.7 370 72.4
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.0e-153 546.2 371 72.8
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.0e-153 546.2 371 72.8
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 6.3e-152 541.2 370 71.1
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 6.3e-152 541.2 370 71.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 8.3e-152 540.8 368 72.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 1.8e-151 539.7 370 71.4
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.4e-151 539.3 369 72.4
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 5.3e-151 538.1 371 72.5
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.2e-150 537.0 368 73.1
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.0e-150 536.2 370 70.8
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 3.5e-150 535.4 371 71.2
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.5e-148 529.3 373 71.3
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.2e-148 528.5 418 65.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 5.5e-148 528.1 370 69.7
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.6e-147 526.6 373 70.5
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 5.2e-146 521.5 385 67.3
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 6.8e-146 521.2 385 67.3
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 8.8e-146 520.8 361 71.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.2e-145 520.4 371 71.4
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 2.2e-144 516.2 348 72.7
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 8.3e-144 514.2 340 73.8
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.4e-143 513.5 376 70.2
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 9.1e-143 510.8 371 69.0
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.2e-142 510.4 374 67.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.6e-142 510.0 371 69.0
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 3.5e-142 508.8 374 67.9
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.5e-142 508.8 374 67.9
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 4.5e-142 508.4 364 69.8
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.0e-141 507.3 360 69.2
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.9e-141 505.8 315 78.7
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.9e-141 505.8 371 68.5
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 6.6e-141 504.6 363 69.1
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 2.5e-140 502.7 362 69.3
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 2.5e-140 502.7 315 78.1
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 4.2e-140 501.9 374 67.1
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 9.5e-140 500.7 370 65.9
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.2e-139 500.4 369 68.6
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 3.6e-139 498.8 311 76.5
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 5.2e-138 495.0 340 71.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.6e-137 492.7 363 67.8
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 4.4e-137 491.9 371 67.1
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 4.4e-137 491.9 371 66.3
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.3e-136 490.3 378 67.2
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.3e-136 490.3 364 68.7
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 3.7e-136 488.8 369 66.1
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 1.1e-135 487.3 378 67.2
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.8e-135 486.5 371 66.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 4.1e-135 485.3 371 66.8
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 7.0e-135 484.6 375 65.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 9.2e-135 484.2 378 66.9
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.6e-134 483.4 371 65.8
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 7.8e-134 481.1 371 66.3
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.3e-133 480.3 364 65.7
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.9e-133 479.2 374 64.2
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.9e-133 479.2 380 63.9
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 8.6e-133 477.6 369 65.3
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 8.6e-133 477.6 369 65.3
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.1e-132 477.2 369 65.3
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.9e-132 476.5 313 73.5
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.9e-132 476.5 384 65.1
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.5e-132 476.1 300 77.3
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 3.3e-132 475.7 376 66.5
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 8.0e-131 471.1 397 60.7
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.0e-130 470.7 362 65.7
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.1e-130 469.2 373 64.9
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.2e-129 467.2 372 64.2
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 7.5e-129 464.5 315 69.2
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.9e-127 459.9 281 80.1
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 5.4e-127 458.4 282 78.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.2e-126 457.2 372 60.5
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.7e-125 453.4 280 78.6
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 2.5e-124 449.5 338 63.0
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 5.6e-124 448.4 356 64.6
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.2e-123 447.2 299 72.9
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.2e-121 440.7 331 65.0
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 8.3e-120 434.5 372 60.8
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.1e-110 403.3 483 47.6
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 2.5e-108 396.4 372 57.3
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 2.6e-105 386.3 249 74.7
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.0e-102 375.2 271 67.9
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 8.1e-99 364.8 324 55.6
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.4e-98 363.2 329 56.2
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.4e-98 363.2 329 56.2
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 3.9e-93 345.9 236 72.5
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.6e-93 345.1 205 82.4
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 9.6e-92 341.3 275 61.1
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.7e-88 330.5 276 61.2
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 8.4e-88 328.2 234 64.1
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 3.8e-80 302.8 165 90.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.2e-57 228.0 190 57.9
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 8.5e-48 195.3 165 57.0
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 9.1e-42 175.3 171 48.5
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 6.8e-37 159.1 125 63.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 5.4e-34 149.4 149 53.7
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 8.8e-29 132.1 133 51.9
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.1e-26 122.1 106 49.1
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 2.7e-25 120.6 85 72.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.4e-20 103.2 133 46.6
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.9e-19 100.5 84 63.1
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.2e-06 58.5 47 61.7
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.6e-06 58.2 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.6e-06 58.2 48 62.5


User provided reference genes

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