Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024673 Sechium edule HOM05D004441 ORTHO05D003109 4.2e-124 448.4 285 100.0
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 1.2e-62 244.2 293 54.9
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 1.2e-62 244.2 293 54.9
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 1.3e-56 224.2 295 50.5
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.1e-55 221.1 295 50.2
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 1.7e-16 90.9 228 36.4
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 4.2e-15 86.3 297 30.0
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 7.2e-15 85.5 219 37.0
CsaV3_1G011910 Cucumis sativus L. HOM05D004441 ORTHO05D003109 2.3e-13 80.5 237 33.3
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 2.3e-13 80.5 205 37.1
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 3.0e-13 80.1 209 35.9
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 1.5e-12 77.8 242 36.0
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 5.7e-12 75.9 169 41.4
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 1.3e-11 74.7 157 41.4
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.7e-11 74.3 227 35.2
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 4.8e-11 72.8 221 35.3
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 6.3e-11 72.4 171 39.8
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 8.3e-11 72.0 240 33.8
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.1e-10 71.6 233 34.8
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 1.4e-10 71.2 153 41.2
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 1.8e-10 70.9 226 33.6
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.8e-10 70.9 143 42.0
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.8e-10 70.9 242 32.2
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.8e-10 70.9 143 42.0
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 2.4e-10 70.5 216 37.5
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 4.1e-10 69.7 171 39.2
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 4.1e-10 69.7 242 31.4
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.3e-10 69.3 227 33.9
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.3e-10 69.3 227 33.9
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 5.3e-10 69.3 216 36.6
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 7.0e-10 68.9 215 36.7
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 2.0e-09 67.4 223 35.0
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 2.0e-09 67.4 227 32.6
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 2.7e-09 67.0 233 34.8
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 3.5e-09 66.6 171 40.9
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 4.5e-09 66.2 151 41.1
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 5.9e-09 65.9 201 36.3
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 5.9e-09 65.9 165 35.8
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 5.9e-09 65.9 234 32.5
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 7.7e-09 65.5 201 36.3
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 7.7e-09 65.5 246 31.3
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.0e-08 65.1 143 40.6
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 1.3e-08 64.7 233 31.8
Cpa.g.sc27.93 Carica papaya HOM05D004441 ORTHO05D003109 2.2e-08 63.9 119 42.0
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 2.2e-08 63.9 179 33.5
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 2.9e-08 63.5 212 35.8
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.8e-08 63.2 166 36.7
Sed0025630 Sechium edule HOM05D004441 ORTHO05D003109 5.0e-08 62.8 196 34.7
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.1e-07 61.6 160 37.5
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.5e-07 61.2 166 36.1
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 1.9e-07 60.8 227 33.9
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 2.5e-07 60.5 210 33.3
Psat0s2678g0120 Pisum sativum HOM05D004441 ORTHO05D003109 2.5e-07 60.5 158 37.3
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 2.5e-07 60.5 203 33.5
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 3.2e-07 60.1 158 38.6
ECA234G0694 Erigeron canadensis HOM05D009304 ORTHO05D003109 4.2e-07 59.7 212 31.6
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 5.5e-07 59.3 166 35.5
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 7.2e-07 58.9 206 34.0
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 9.4e-07 58.5 166 36.1
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 9.4e-07 58.5 143 39.9
Manes.16G023200 Manihot esculenta HOM05D004441 ORTHO05D003109 1.2e-06 58.2 165 38.2
Rhsim04G0066200 Rhododendron simsii HOM05D009304 ORTHO05D003109 1.2e-06 58.2 204 34.8
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.2e-06 58.2 203 33.5
COL.COLO4_13710 Corchorus olitorius HOM05D053928 ORTHO05D003109 2.1e-06 57.4 154 34.4
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 2.1e-06 57.4 153 41.2
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 4.7e-06 56.2 169 34.3


User provided reference genes

Program Settings