Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 5.8e-30 133.7 72 100.0
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 7.9e-27 123.2 72 90.3
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.3e-26 122.5 72 90.3
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 1.6e-24 115.5 72 81.9
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 1.6e-24 115.5 66 89.4
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.8e-24 114.8 71 83.1
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 2.8e-24 114.8 72 83.3
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 9.0e-23 109.8 72 79.2
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 9.0e-23 109.8 71 78.9
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.2e-22 109.4 71 78.9
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.5e-22 109.0 72 77.8
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 2.6e-22 108.2 70 80.0
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 2.2e-21 105.1 71 74.6
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 76.7
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 78.1
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 3.8e-21 104.4 73 75.3
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 3.8e-21 104.4 72 76.4
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 1.1e-20 102.8 73 74.0
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 1.9e-20 102.1 73 75.3
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.9e-20 102.1 70 71.4
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 2.5e-20 101.7 66 78.8
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 2.5e-20 101.7 70 72.9
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 3.2e-20 101.3 72 76.4
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 4.2e-20 100.9 72 72.2
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 4.2e-20 100.9 66 77.3
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.5e-20 100.5 69 72.5
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 5.5e-20 100.5 67 74.6
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 5.5e-20 100.5 71 71.8
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 5.5e-20 100.5 70 71.4
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 5.5e-20 100.5 67 74.6
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 7.1e-20 100.1 73 72.6
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 7.1e-20 100.1 66 77.3
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 9.3e-20 99.8 72 75.0
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.6e-19 99.0 88 64.8
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 1.6e-19 99.0 72 72.2
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 1.6e-19 99.0 70 74.3
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 2.1e-19 98.6 70 72.9
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 6.1e-19 97.1 66 72.7
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 6.1e-19 97.1 64 76.6
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 7.9e-19 96.7 72 68.1
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.0e-18 96.3 67 71.6
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.3e-18 95.9 65 73.8
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.3e-18 95.9 65 73.8
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.8e-18 95.5 70 67.1
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.3e-18 95.1 70 67.1
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 3.0e-18 94.7 72 68.1
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 3.9e-18 94.4 64 73.4
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.9e-18 94.4 70 67.1
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 3.9e-18 94.4 72 65.3
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 5.1e-18 94.0 67 67.2
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 5.1e-18 94.0 71 66.2
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 6.7e-18 93.6 72 68.1
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 8.7e-18 93.2 72 65.3
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 1.1e-17 92.8 71 74.6
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 1.9e-17 92.0 64 70.3
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 1.9e-17 92.0 70 71.4
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 2.5e-17 91.7 64 68.8
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.5e-17 91.7 64 68.8
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.5e-17 91.7 64 68.8
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.5e-17 91.7 64 68.8
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.5e-17 91.7 64 68.8
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 2.5e-17 91.7 67 70.1
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 3.3e-17 91.3 66 66.7
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 4.3e-17 90.9 62 71.0
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 5.7e-17 90.5 64 67.2
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 9.7e-17 89.7 61 72.1
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 9.7e-17 89.7 64 71.9
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 1.3e-16 89.4 67 64.2
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.2e-16 88.6 64 65.6
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 3.7e-16 87.8 72 61.1
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 3.7e-16 87.8 70 64.3
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 4.8e-16 87.4 66 63.6
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 1.4e-15 85.9 62 67.7
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 1.4e-15 85.9 67 64.2
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 5.3e-15 84.0 70 58.6
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 9.0e-15 83.2 67 59.7
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 2.6e-14 81.6 67 58.2
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 4.5e-14 80.9 70 61.4
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 7.7e-14 80.1 65 60.0
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 1.7e-13 79.0 67 55.2
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 1.7e-13 79.0 67 55.2
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 1.7e-13 79.0 62 61.3
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.7e-13 79.0 68 57.4
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.7e-13 79.0 68 57.4
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 1.7e-13 79.0 62 61.3
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 1.1e-12 76.3 69 63.8
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 4.2e-12 74.3 63 58.7
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 9.4e-12 73.2 67 53.7
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 4.6e-11 70.9 47 80.9
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 7.9e-11 70.1 45 73.3
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 1.4e-10 69.3 72 48.6
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.4e-10 69.3 67 50.7
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 1.4e-10 69.3 69 50.7
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 1.8e-10 68.9 44 72.7
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 2.3e-10 68.6 43 69.8
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 3.9e-10 67.8 45 80.0
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 3.9e-10 67.8 51 70.6
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 1.7e-08 62.4 47 68.1
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.7e-08 61.2 46 73.9
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 6.3e-08 60.5 40 75.0
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.1e-07 59.7 42 73.8
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 1.8e-07 58.9 44 75.0
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 2.4e-07 58.5 53 66.0
Zm00001eb077870 Zea mays HOM05D007530 ORTHO05D009556 7.7e-06 53.5 37 67.6


User provided reference genes

Program Settings