Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024639 Sechium edule HOM05D008112 ORTHO05D010225 9.1e-56 219.9 106 100.0
Sed0023854 Sechium edule HOM05D008112 ORTHO05D010225 3.7e-17 91.7 104 52.9
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 4.9e-17 91.3 122 49.2
ClCG05G022690 Citrullus lanatus HOM05D008112 ORTHO05D010225 4.1e-16 88.2 101 57.4
CsaV3_5G034340 Cucumis sativus L. HOM05D008112 ORTHO05D010225 4.0e-11 71.6 116 44.8
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.2e-08 62.0 111 37.8
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 4.1e-08 61.6 106 38.7
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 4.1e-08 61.6 100 36.0
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 4.1e-08 61.6 85 41.2
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 5.4e-08 61.2 111 37.8
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 5.4e-08 61.2 106 35.8
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 7.1e-08 60.8 106 39.6
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 7.1e-08 60.8 106 39.6
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 7.1e-08 60.8 106 39.6
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 7.1e-08 60.8 100 43.0
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 9.2e-08 60.5 107 36.4
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 1.6e-07 59.7 111 36.9
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 2.1e-07 59.3 103 38.8
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 2.7e-07 58.9 108 37.0
ClCG08G005370 Citrullus lanatus HOM05D038709 ORTHO05D010225 3.5e-07 58.5 105 37.1
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 3.5e-07 58.5 94 41.5
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 4.6e-07 58.2 94 40.4
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 7.8e-07 57.4 102 37.3
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 1.0e-06 57.0 107 37.4
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 1.0e-06 57.0 105 37.1
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 1.7e-06 56.2 110 35.5
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 2.3e-06 55.8 100 40.0
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.3e-06 55.8 105 37.1
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 3.0e-06 55.5 107 39.3
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 3.9e-06 55.1 94 34.0
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 3.9e-06 55.1 105 37.1
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 6.6e-06 54.3 95 33.7
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 6.6e-06 54.3 99 37.4


User provided reference genes

Program Settings