Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 1.6e-134 483.8 515 100.0
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 4.6e-68 263.1 561 62.4
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.1e-57 227.6 509 63.9
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 2.9e-46 190.7 124 69.4
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.4e-45 187.6 138 63.0
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 3.2e-45 187.2 158 57.6
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.2e-45 186.8 150 60.7
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 7.1e-45 186.0 515 65.6
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 7.1e-45 186.0 138 62.3
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 7.1e-45 186.0 147 61.2
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 9.3e-45 185.7 146 62.3
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 1.6e-44 184.9 136 64.0
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.6e-44 184.9 130 65.4
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 2.1e-44 184.5 132 64.4
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 2.1e-44 184.5 142 65.5
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 2.7e-44 184.1 125 67.2
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 2.7e-44 184.1 139 62.6
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 6.0e-44 183.0 132 63.6
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 6.0e-44 183.0 133 62.4
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 1.3e-43 181.8 138 62.3
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 1.7e-43 181.4 121 66.9
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 2.3e-43 181.0 145 59.3
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 2.3e-43 181.0 124 66.1
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 3.0e-43 180.6 148 60.8
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 6.6e-43 179.5 138 61.6
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.1e-42 178.7 161 56.5
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 1.5e-42 178.3 160 57.5
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.5e-42 177.6 130 61.5
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 4.3e-42 176.8 116 65.5
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 5.6e-42 176.4 165 52.7
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 5.6e-42 176.4 149 59.1
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 9.6e-42 175.6 139 59.7
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 1.3e-41 175.3 156 59.0
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.6e-41 174.9 124 64.5
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 3.6e-41 173.7 125 65.6
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 4.8e-41 173.3 124 62.9
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 6.2e-41 172.9 116 66.4
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.1e-40 172.2 140 59.3
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 1.4e-40 171.8 120 64.2
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 3.1e-40 170.6 120 65.8
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 3.1e-40 170.6 126 63.5
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 4.0e-40 170.2 131 62.6
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 6.9e-40 169.5 151 55.6
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 9.0e-40 169.1 159 54.1
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.2e-39 168.7 113 69.9
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.2e-39 168.7 123 62.6
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.5e-39 168.3 115 67.0
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 2.0e-39 167.9 131 61.8
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 2.0e-39 167.9 114 66.7
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 3.4e-39 167.2 114 66.7
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 1.7e-38 164.9 114 65.8
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 2.2e-38 164.5 123 61.8
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.9e-38 164.1 150 56.0
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 3.8e-38 163.7 144 59.0
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.9e-38 163.3 113 67.3
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 4.9e-38 163.3 136 61.0
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 8.4e-38 162.5 130 60.0
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.4e-37 161.8 149 57.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 2.4e-37 161.0 113 66.4
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 4.2e-37 160.2 127 58.3
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 1.6e-36 158.3 121 63.6
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.6e-36 158.3 137 60.6
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 1.6e-36 158.3 144 55.6
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 3.5e-36 157.1 135 57.8
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 4.6e-36 156.8 129 59.7
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.6e-36 156.8 133 58.6
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 4.6e-36 156.8 128 60.2
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 6.0e-36 156.4 147 55.1
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.0e-36 156.4 133 58.6
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.0e-35 155.6 133 56.4
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.0e-35 155.6 133 56.4
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.0e-35 155.6 133 56.4
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.0e-35 155.6 133 56.4
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.0e-35 155.6 133 56.4
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 1.7e-35 154.8 135 57.0
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 2.3e-35 154.5 114 63.2
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 3.0e-35 154.1 145 55.9
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 3.0e-35 154.1 114 66.7
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 3.9e-35 153.7 122 59.8
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 6.6e-35 152.9 135 59.3
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 8.7e-35 152.5 129 57.4
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 8.7e-35 152.5 142 53.5
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.1e-34 152.1 135 59.3
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.5e-34 151.8 122 61.5
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 1.5e-34 151.8 129 56.6
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 1.9e-34 151.4 128 57.8
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 1.9e-34 151.4 128 57.8
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 1.9e-34 151.4 128 57.8
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 1.9e-34 151.4 128 57.8
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 1.9e-34 151.4 128 57.8
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 4.3e-34 150.2 150 53.3
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.3e-34 150.2 124 59.7
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 4.3e-34 150.2 145 55.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 7.3e-34 149.4 168 51.8
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.6e-34 149.1 120 57.5
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.3e-33 148.7 126 57.1
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 2.1e-33 147.9 118 61.9
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.1e-33 147.9 134 55.2
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.8e-33 147.5 120 57.5
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 3.6e-33 147.1 144 53.5
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 4.8e-33 146.7 129 56.6
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 6.2e-33 146.4 119 60.5
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 6.2e-33 146.4 118 60.2
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 8.1e-33 146.0 160 48.8
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 8.1e-33 146.0 113 61.9
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-32 145.6 132 54.5
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.4e-32 145.2 113 56.6
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.8e-32 144.8 143 50.3
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.8e-32 144.8 157 51.0
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.8e-32 144.8 118 61.0
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.4e-32 144.4 126 56.3
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 2.4e-32 144.4 107 61.7
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 2.4e-32 144.4 128 58.6
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 3.1e-32 144.1 123 57.7
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 5.3e-32 143.3 151 51.0
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 6.9e-32 142.9 122 56.6
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 9.0e-32 142.5 119 57.1
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.2e-31 142.1 111 58.6
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-31 142.1 113 55.8
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 1.2e-31 142.1 110 56.4
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.5e-31 141.7 133 58.6
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.5e-31 141.7 126 54.8
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.0e-31 141.4 124 56.5
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.0e-31 141.4 142 55.6
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.6e-31 141.0 126 54.8
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 3.4e-31 140.6 125 56.0
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 4.5e-31 140.2 161 50.3
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 1.3e-30 138.7 158 46.8
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 1.7e-30 138.3 145 49.7
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.2e-30 137.9 147 52.4
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.9e-30 137.5 137 51.8
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 4.9e-30 136.7 125 59.2
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 8.4e-30 136.0 127 56.7
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 8.4e-30 136.0 144 50.7
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 8.4e-30 136.0 119 58.8
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 3.2e-29 134.0 128 52.3
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.2e-29 133.7 124 54.8
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 7.1e-29 132.9 96 66.7
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.6e-28 131.7 156 45.5
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 1.6e-28 131.7 135 51.1
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 1.6e-28 131.7 128 51.6
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 2.1e-28 131.3 111 55.0
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 2.1e-28 131.3 131 49.6
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 2.7e-28 131.0 141 48.2
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 3.5e-28 130.6 120 60.0
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 1.3e-27 128.6 118 54.2
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 3.0e-27 127.5 140 49.3
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.0e-27 127.5 135 54.8
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 3.0e-27 127.5 143 46.9
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 5.1e-27 126.7 111 52.3
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.9e-26 124.8 111 52.3
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 5.6e-26 123.2 113 53.1
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 2.1e-25 121.3 129 51.2
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 2.8e-25 120.9 114 52.6
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 2.8e-25 120.9 114 52.6
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 2.8e-25 120.9 114 52.6
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 3.7e-25 120.6 116 50.9
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 3.7e-25 120.6 109 53.2
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 4.8e-25 120.2 115 53.0
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 8.1e-25 119.4 109 49.5
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 8.1e-25 119.4 114 51.8
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 3.1e-24 117.5 118 50.8
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.0e-24 117.1 114 49.1
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 5.8e-23 113.2 111 51.4
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 1.3e-22 112.1 109 54.1
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 2.5e-21 107.8 135 46.7
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 6.0e-20 103.2 117 47.0
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.8e-19 101.7 90 48.9
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 4.8e-17 93.6 151 41.1
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 2.0e-15 88.2 112 46.4
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 5.8e-15 86.7 112 43.8
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 1.0e-14 85.9 115 47.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 2.2e-14 84.7 141 40.4
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 6.5e-14 83.2 151 40.4
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 7.2e-13 79.7 119 40.3
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 7.9e-12 76.3 46 65.2
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 8.7e-11 72.8 66 53.0
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.3e-10 70.5 113 36.3
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.6e-09 68.6 114 35.1
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 1.1e-08 65.9 108 36.1
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.4e-08 65.5 114 35.1
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 1.3e-06 58.9 107 37.4
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 5.0e-06 57.0 128 33.6
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 6.5e-06 56.6 30 73.3
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 8.5e-06 56.2 107 37.4


User provided reference genes

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