Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 2.3e-126 455.7 252 100.0
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 3.1e-94 349.0 256 77.7
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.9e-92 342.4 256 76.2
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 6.0e-82 308.1 246 72.0
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 8.5e-52 208.0 253 52.6
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.1e-51 207.6 256 53.1
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.5e-51 207.2 260 53.1
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.9e-51 206.8 257 53.7
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.1e-50 203.4 260 50.8
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.8e-49 200.3 255 52.9
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.3e-49 199.9 261 53.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 3.0e-49 199.5 256 50.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 2.6e-48 196.4 243 53.9
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.6e-48 196.4 259 49.8
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 3.4e-48 196.1 257 52.1
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.3e-47 194.1 258 51.6
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.2e-47 193.4 256 48.8
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 2.8e-47 193.0 240 53.8
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 6.3e-47 191.8 253 48.2
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.1e-46 191.0 252 50.8
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 5.3e-46 188.7 254 50.0
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 9.1e-46 188.0 258 48.8
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.2e-45 187.6 237 48.9
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.6e-45 187.2 257 49.0
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 2.0e-45 186.8 252 49.6
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.7e-45 186.4 257 47.9
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.3e-44 184.1 263 49.8
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.3e-44 184.1 263 49.8
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 2.9e-44 183.0 262 49.2
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 2.9e-44 183.0 259 47.1
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 3.8e-44 182.6 255 49.0
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.0e-44 182.2 263 49.8
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 5.0e-44 182.2 210 52.4
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 5.0e-44 182.2 252 48.4
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 6.5e-44 181.8 261 48.7
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 8.5e-44 181.4 262 48.9
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.1e-43 181.0 259 48.3
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.9e-43 180.3 239 51.0
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.5e-43 179.9 261 49.8
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.5e-43 179.9 258 48.1
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.2e-43 179.5 261 49.0
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 4.2e-43 179.1 255 50.2
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 4.2e-43 179.1 257 48.2
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 7.2e-43 178.3 258 48.4
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.6e-42 177.2 206 50.0
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.1e-42 176.8 252 46.0
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 2.7e-42 176.4 256 46.9
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 4.7e-42 175.6 254 48.8
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 4.7e-42 175.6 263 49.8
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 4.7e-42 175.6 253 46.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.0e-41 174.5 249 49.4
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 2.3e-41 173.3 250 47.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.3e-41 173.3 257 47.1
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 3.0e-41 172.9 260 49.2
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 4.0e-41 172.6 252 45.2
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 4.0e-41 172.6 258 45.7
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 2.0e-40 170.2 251 47.0
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 3.4e-40 169.5 261 47.9
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 2.8e-39 166.4 202 53.5
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 4.8e-39 165.6 259 46.3
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.1e-38 164.5 215 48.4
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.1e-38 162.5 257 43.6
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 7.0e-38 161.8 113 69.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.2e-37 161.0 244 45.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.3e-36 157.5 105 76.2
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.3e-36 157.5 105 76.2
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.7e-36 157.1 208 51.9
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 8.6e-36 154.8 173 53.8
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.5e-35 154.1 229 45.9
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.5e-35 154.1 253 43.1
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 4.2e-35 152.5 164 58.5
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 1.2e-34 151.0 164 55.5
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 1.6e-34 150.6 114 69.3
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.8e-34 149.8 111 69.4
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 4.7e-34 149.1 130 62.3
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 4.7e-34 149.1 130 62.3
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 6.1e-34 148.7 250 44.0
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 6.1e-34 148.7 130 62.3
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 6.1e-34 148.7 117 68.4
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 3.0e-33 146.4 254 39.4
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 4.0e-33 146.0 164 54.9
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 4.0e-33 146.0 146 56.8
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 4.0e-33 146.0 114 67.5
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 4.0e-33 146.0 114 67.5
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 4.0e-33 146.0 114 67.5
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 4.0e-33 146.0 114 67.5
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 5.2e-33 145.6 159 56.6
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 5.2e-33 145.6 242 45.0
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.2e-32 144.4 147 53.7
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.6e-32 143.3 159 54.1
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 3.4e-32 142.9 164 51.8
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 3.4e-32 142.9 261 44.4
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 5.7e-32 142.1 133 60.9
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 5.7e-32 142.1 176 51.7
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 9.8e-32 141.4 178 51.7
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.8e-31 139.8 178 51.1
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 8.3e-31 138.3 146 56.8
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 3.2e-30 136.3 164 50.0
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.9e-27 127.1 157 51.0
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 7.3e-27 125.2 137 53.3
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.2e-26 124.4 235 41.7
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.0e-25 121.3 246 36.6
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 3.4e-24 116.3 159 45.3
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 3.7e-23 112.8 85 69.4
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 8.3e-23 111.7 166 44.0
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 3.3e-19 99.8 196 39.3
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 3.4e-16 89.7 144 41.0
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.1e-14 84.7 195 37.9
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 4.9e-07 59.3 115 37.4


User provided reference genes

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