Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.0e-32 142.9 78 100.0
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 2.9e-27 124.8 78 87.2
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 2.6e-23 111.7 75 81.3
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 9.8e-23 109.8 73 84.9
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 2.4e-21 105.1 73 80.8
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 4.5e-20 100.9 75 74.7
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 1.0e-19 99.8 75 72.0
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.0e-19 99.8 74 74.3
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.3e-19 99.4 75 73.3
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.3e-19 99.4 75 73.3
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 71.8
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 71.8
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 74.7
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.3e-19 98.6 75 73.3
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.3e-19 98.6 75 77.3
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 2.9e-19 98.2 78 73.1
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.8e-19 97.8 75 73.3
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 3.8e-19 97.8 74 75.7
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 3.8e-19 97.8 75 69.3
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 5.0e-19 97.4 75 72.0
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 5.0e-19 97.4 78 69.2
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 5.0e-19 97.4 75 73.3
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 8.6e-19 96.7 78 71.8
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 8.6e-19 96.7 78 71.8
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 8.6e-19 96.7 78 69.2
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 8.6e-19 96.7 78 69.2
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.5e-18 95.9 73 72.6
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.9e-18 95.5 70 78.6
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 1.9e-18 95.5 78 69.2
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 2.5e-18 95.1 73 72.6
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 4.2e-18 94.4 78 71.8
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 7.2e-18 93.6 73 74.0
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 7.2e-18 93.6 70 75.7
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 9.5e-18 93.2 73 69.9
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 9.5e-18 93.2 75 68.0
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.2e-17 92.8 78 66.7
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 3.6e-17 91.3 78 69.2
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 3.6e-17 91.3 70 72.9
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 3.6e-17 91.3 75 69.3
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 8.0e-17 90.1 76 67.1
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 1.0e-16 89.7 78 69.2
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 1.0e-16 89.7 76 68.4
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 1.4e-16 89.4 73 68.5
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.4e-16 89.4 78 69.2
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 4.0e-16 87.8 73 68.5
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 1.5e-15 85.9 79 65.8
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 2.0e-15 85.5 82 64.6
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.4e-15 84.7 75 66.7
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 5.7e-15 84.0 70 68.6
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 5.7e-15 84.0 70 68.6
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.7e-15 84.0 89 58.4
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 5.7e-15 84.0 76 65.8
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.3e-14 82.8 70 68.6
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.3e-14 82.8 70 68.6
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 1.7e-14 82.4 77 62.3
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.1e-13 79.7 74 67.6
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 1.4e-13 79.3 74 64.9
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 1.8e-13 79.0 70 65.7
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 2.4e-13 78.6 74 67.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 7.0e-13 77.0 73 61.6
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 9.2e-13 76.6 73 61.6
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 9.2e-13 76.6 77 59.7
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 1.2e-12 76.3 73 63.0
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.6e-12 75.9 75 60.0
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 2.7e-12 75.1 84 60.7
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.0e-11 73.2 73 60.3
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.9e-11 71.6 74 60.8
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 6.6e-11 70.5 59 74.6
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 8.6e-11 70.1 85 56.5
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 1.1e-10 69.7 75 60.0
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 3.3e-10 68.2 90 51.1
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 4.3e-10 67.8 78 53.8
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 5.6e-10 67.4 86 51.2
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.2e-09 66.2 72 56.9
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 1.2e-09 66.2 75 54.7
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.8e-08 62.4 86 51.2
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 1.5e-07 59.3 70 57.1
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 3.4e-07 58.2 78 46.2
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 4.4e-07 57.8 67 55.2
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 4.4e-07 57.8 39 79.5
CAN.G508.27 Capsicum annuum HOM05D001304 ORTHO05D005183 8.3e-06 53.5 38 73.7
TAR376G0843 Trochodendron aralioides HOM05D007769 ORTHO05D009588 8.3e-06 53.5 35 85.7


User provided reference genes

Program Settings