Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 1.3e-173 612.8 288 100.0
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 3.2e-143 511.9 285 83.2
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.9e-135 486.1 285 78.6
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 3.9e-133 478.4 285 77.5
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 6.6e-133 477.6 285 77.2
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.8e-131 472.2 284 77.5
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 8.1e-131 470.7 284 75.7
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.8e-130 469.5 284 76.1
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 4.0e-130 468.4 284 75.4
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.5e-129 466.5 284 75.4
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 2.0e-129 466.1 284 75.7
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.6e-129 465.7 287 74.6
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 9.8e-129 463.8 284 75.7
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 9.8e-129 463.8 284 75.7
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 9.8e-129 463.8 284 75.4
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 4.9e-128 461.5 284 74.6
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.4e-127 459.9 284 74.3
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 1.4e-127 459.9 284 73.2
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 1.9e-127 459.5 284 72.9
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 2.4e-127 459.1 284 75.0
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 3.2e-127 458.8 286 73.8
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 4.1e-127 458.4 284 73.2
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 5.4e-127 458.0 284 76.1
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 5.4e-127 458.0 284 76.1
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 5.4e-127 458.0 286 73.8
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 5.4e-127 458.0 280 74.6
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 5.4e-127 458.0 284 74.6
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 7.1e-127 457.6 284 74.6
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 7.1e-127 457.6 284 73.2
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.6e-126 456.4 285 73.0
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.6e-126 456.4 284 74.3
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 2.1e-126 456.1 287 74.6
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 2.7e-126 455.7 285 72.3
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 2.7e-126 455.7 285 72.3
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 4.6e-126 454.9 284 73.9
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 4.6e-126 454.9 284 73.9
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 4.6e-126 454.9 285 73.3
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 6.0e-126 454.5 284 74.3
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 7.8e-126 454.1 284 75.7
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 7.8e-126 454.1 284 73.9
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 7.8e-126 454.1 284 74.3
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 1.3e-125 453.4 284 73.6
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 1.3e-125 453.4 284 73.9
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.7e-125 453.0 282 73.4
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 3.0e-125 452.2 284 73.9
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 6.6e-125 451.1 281 73.7
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.1e-124 450.3 284 73.2
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 1.1e-124 450.3 284 71.5
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.5e-124 449.9 291 72.2
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.5e-124 449.9 284 71.5
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.5e-124 449.1 287 71.1
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 3.3e-124 448.7 282 73.0
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 5.6e-124 448.0 284 72.9
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 7.3e-124 447.6 283 71.4
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 2.8e-123 445.7 284 71.8
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 3.6e-123 445.3 285 74.4
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 3.6e-123 445.3 283 72.1
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 6.2e-123 444.5 288 71.2
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.1e-122 443.7 281 73.0
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.4e-122 443.4 285 70.5
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 1.8e-122 443.0 283 72.1
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 1.8e-122 443.0 284 70.8
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 2.3e-122 442.6 285 72.6
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 2.3e-122 442.6 285 71.2
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 3.1e-122 442.2 284 70.4
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 4.0e-122 441.8 282 72.0
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 4.0e-122 441.8 284 70.4
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 4.0e-122 441.8 285 71.2
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 2.6e-121 439.1 301 68.4
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 2.6e-121 439.1 281 72.6
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 3.4e-121 438.7 288 69.8
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 3.4e-121 438.7 277 71.8
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 4.4e-121 438.3 285 70.2
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 4.4e-121 438.3 281 72.6
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 2.2e-120 436.0 272 72.1
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 3.7e-120 435.3 284 71.5
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 6.4e-120 434.5 284 71.8
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 8.4e-120 434.1 283 71.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.9e-119 433.0 287 69.0
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 3.2e-119 432.2 277 71.1
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.2e-118 430.3 284 69.4
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 2.7e-118 429.1 284 70.4
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 3.5e-118 428.7 284 71.1
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 6.0e-118 427.9 284 69.7
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 1.0e-117 427.2 284 70.4
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 1.7e-117 426.4 284 70.8
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 2.3e-117 426.0 284 70.1
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 2.3e-117 426.0 284 71.5
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 2.3e-117 426.0 284 71.5
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 3.9e-117 425.2 284 70.1
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 6.6e-117 424.5 284 69.4
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 6.6e-117 424.5 284 70.1
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 6.6e-117 424.5 284 69.4
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 6.6e-117 424.5 278 70.9
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 1.1e-116 423.7 284 69.7
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.1e-116 423.7 284 70.8
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 1.5e-116 423.3 278 71.2
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.9e-116 422.9 297 67.7
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.9e-116 422.9 282 69.1
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 3.3e-116 422.2 279 67.7
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 4.3e-116 421.8 270 71.9
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 2.8e-115 419.1 280 66.4
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 6.2e-115 417.9 284 69.4
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 8.1e-115 417.5 277 67.5
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 8.9e-114 414.1 284 68.0
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 1.5e-113 413.3 274 68.2
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 3.4e-113 412.1 329 61.1
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 4.2e-111 405.2 246 75.2
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 7.8e-110 401.0 276 65.9
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 5.8e-105 384.8 274 65.3
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.6e-102 376.7 235 73.2
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 3.5e-102 375.6 287 65.5
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 1.9e-100 369.8 233 70.4
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.4e-98 363.6 278 59.0
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 9.9e-97 357.5 225 74.7
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 6.7e-93 344.7 277 58.8
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 1.6e-91 340.1 277 58.8
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 6.2e-91 338.2 278 56.5
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.8e-90 336.7 196 79.6
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 1.5e-84 317.0 218 67.0
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 2.1e-78 296.6 272 55.1
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 7.9e-78 294.7 280 51.1
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 2.2e-72 276.6 171 74.9
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 5.0e-72 275.4 288 50.3
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 7.9e-70 268.1 166 73.5
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 8.2e-67 258.1 308 42.5
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 4.1e-58 229.2 276 43.1
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 5.5e-55 218.8 228 47.4
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 9.7e-52 208.0 282 40.8
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 2.4e-50 203.4 276 40.9
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 8.0e-38 161.8 114 64.0
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 2.4e-34 150.2 103 66.0
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 3.5e-17 93.2 77 55.8
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 4.0e-13 79.7 60 60.0
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 2.0e-12 77.4 52 67.3


User provided reference genes

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