Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 5.5e-75 284.3 149 100.0
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.7e-53 212.2 154 78.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 4.9e-47 191.4 155 74.2
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.1e-41 172.2 152 63.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 8.9e-33 144.1 106 70.8
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 4.2e-22 108.6 146 46.6
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 4.3e-19 98.6 143 44.1
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 9.6e-19 97.4 140 46.4
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.1e-18 94.4 107 47.7
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.4e-17 93.6 139 43.9
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.4e-17 92.8 142 42.3
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 3.1e-17 92.4 117 47.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.0e-17 92.0 126 47.6
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 4.0e-17 92.0 124 49.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 5.3e-17 91.7 130 46.9
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.3e-17 91.7 142 42.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 5.3e-17 91.7 126 45.2
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.5e-16 90.1 135 42.2
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.5e-16 90.1 131 42.7
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.6e-16 89.4 142 40.8
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.5e-16 88.6 128 43.0
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.5e-16 88.6 143 39.2
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 9.9e-16 87.4 128 43.8
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.3e-15 87.0 121 47.1
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.7e-15 86.7 128 46.9
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.9e-15 85.9 130 44.6
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.9e-15 85.1 129 41.1
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 6.4e-15 84.7 131 45.0
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 8.4e-15 84.3 124 45.2
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 8.4e-15 84.3 126 42.1
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-14 84.0 140 40.7
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.1e-14 84.0 128 44.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-14 84.0 118 44.9
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.4e-14 83.6 134 42.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.9e-14 83.2 133 41.4
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 2.4e-14 82.8 134 44.0
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.2e-14 82.4 118 46.6
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 5.4e-14 81.6 131 44.3
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 5.4e-14 81.6 131 40.5
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 7.1e-14 81.3 147 39.5
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 7.1e-14 81.3 129 40.3
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.2e-13 80.5 140 41.4
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 6.0e-13 78.2 120 40.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.0e-12 77.4 133 42.1
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 1.3e-12 77.0 153 36.6
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.9e-12 75.5 123 42.3
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.9e-12 75.5 142 38.7
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.9e-12 75.5 140 37.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 6.7e-12 74.7 102 45.1
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-11 73.9 122 42.6
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.1e-11 73.9 130 40.0
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-11 73.9 126 44.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.5e-11 73.6 128 38.3
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.5e-11 73.6 123 42.3
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.5e-11 73.6 121 41.3
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 3.3e-11 72.4 128 39.8
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 3.3e-11 72.4 132 40.2
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 4.3e-11 72.0 112 42.0
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 4.3e-11 72.0 130 37.7
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 5.6e-11 71.6 141 38.3
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 5.6e-11 71.6 139 38.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 7.4e-11 71.2 128 38.3
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 9.6e-11 70.9 113 40.7
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 9.6e-11 70.9 114 37.7
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 9.6e-11 70.9 127 44.1
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 9.6e-11 70.9 145 37.2
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.3e-10 70.5 96 44.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.6e-10 70.1 138 36.2
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.6e-10 70.1 132 37.9
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 2.1e-10 69.7 104 40.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.1e-10 69.7 124 41.9
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 2.8e-10 69.3 132 37.9
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 4.8e-10 68.6 114 37.7
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 4.8e-10 68.6 134 35.8
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.2e-10 68.2 123 35.8
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 6.2e-10 68.2 130 36.2
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.1e-09 67.4 134 39.6
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.1e-09 67.4 132 37.1
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.8e-09 66.6 128 38.3
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.8e-09 66.6 127 37.8
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.8e-09 66.6 148 35.8
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 4.0e-09 65.5 126 39.7
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 6.9e-09 64.7 125 37.6
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 9.0e-09 64.3 121 41.3
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.2e-08 63.9 123 40.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.2e-08 63.9 123 40.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.2e-08 63.9 123 40.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.0e-08 63.2 122 37.7
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 2.6e-08 62.8 124 37.1
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.6e-08 62.8 122 40.2
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.4e-08 62.4 118 41.5
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 3.4e-08 62.4 125 38.4
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 4.5e-08 62.0 123 39.0
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 9.9e-08 60.8 116 36.2
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 9.9e-08 60.8 103 40.8
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 1.3e-07 60.5 131 35.9
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 1.3e-07 60.5 117 41.0
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-07 60.1 123 37.4
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.2e-07 59.7 118 40.7
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.2e-07 59.7 123 34.1
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.9e-07 59.3 152 34.9
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 3.8e-07 58.9 139 34.5
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.4e-07 57.8 114 37.7
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 8.4e-07 57.8 135 34.1
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.4e-06 57.0 132 35.6
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 3.2e-06 55.8 125 36.8
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 3.2e-06 55.8 125 36.8
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 3.2e-06 55.8 125 36.8
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 4.2e-06 55.5 121 33.1
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 4.2e-06 55.5 107 34.6
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 4.2e-06 55.5 116 32.8
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 7.1e-06 54.7 133 34.6
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 7.1e-06 54.7 111 37.8
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 9.3e-06 54.3 144 31.9


User provided reference genes

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