Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024469 Sechium edule HOM05D004793 ORTHO05D004423 7.6e-62 240.4 124 100.0
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 3.0e-50 201.8 126 88.1
ClCG09G021090 Citrullus lanatus HOM05D004793 ORTHO05D004423 4.3e-49 198.0 126 88.1
Sed0007585 Sechium edule HOM05D004793 ORTHO05D004423 9.0e-47 190.3 126 84.1
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.1e-19 97.8 113 54.9
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.0e-19 97.4 113 54.0
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 2.3e-18 95.9 114 50.9
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 2.3e-18 95.9 114 50.9
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.0e-18 95.5 113 52.2
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.0e-18 95.5 113 52.2
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 3.4e-17 92.0 126 46.0
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 5.7e-17 91.3 127 46.5
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.4e-15 86.7 126 45.2
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 1.4e-15 86.7 115 49.6
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.8e-15 86.3 126 45.2
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 9.1e-15 84.0 126 41.3
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.0e-14 82.8 124 44.4
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 2.7e-14 82.4 115 46.1
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 5.9e-14 81.3 124 44.4
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 5.9e-14 81.3 124 44.4
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.8e-13 78.6 113 45.1
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 1.5e-12 76.6 130 43.1
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 3.2e-12 75.5 137 41.6
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 5.5e-12 74.7 125 41.6
Ciclev10010582m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.6e-11 73.2 122 42.6
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.6e-11 73.2 128 41.4
RcHm_v2.0_Chr5g0042781 Rosa chinensis HOM05D017646 ORTHO05D004423 1.6e-11 73.2 117 44.4
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 6.1e-11 71.2 117 41.9
Gorai.002G096900 Gossypium raimondii HOM05D004793 ORTHO05D004423 6.1e-11 71.2 94 47.9
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 8.0e-11 70.9 125 43.2
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 1.4e-10 70.1 136 41.2
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 8.8e-10 67.4 118 44.1
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 2.0e-09 66.2 118 43.2
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 2.0e-09 66.2 118 43.2
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 2.0e-09 66.2 118 43.2
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 2.0e-09 66.2 118 43.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 9.8e-09 63.9 141 38.3
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.7e-08 63.2 118 42.4
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.2e-08 62.8 110 38.2
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 2.4e-07 59.3 119 38.7
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 3.1e-07 58.9 126 36.5
HPP92_023588 Vanilla planifolia HOM05D020977 ORTHO05D004423 3.1e-07 58.9 127 36.2
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 4.1e-07 58.5 119 38.7
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 5.4e-07 58.2 142 33.8
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 5.4e-07 58.2 141 36.2
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 7.0e-07 57.8 122 39.3
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 7.0e-07 57.8 139 37.4
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 9.2e-07 57.4 143 34.3
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.2e-06 57.0 119 39.5
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 114 39.5
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 114 39.5
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 2.0e-06 56.2 129 37.2
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.0e-06 56.2 116 37.9
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 2.7e-06 55.8 129 38.8
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 2.7e-06 55.8 141 34.0
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.7e-06 55.8 135 35.6
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 3.5e-06 55.5 139 32.4
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 7.7e-06 54.3 119 37.0
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 7.7e-06 54.3 137 37.2


User provided reference genes

Program Settings