Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 6.5e-134 480.7 240 100.0
Sed0007988 Sechium edule HOM05D007209 ORTHO05D000921 1.6e-95 353.2 245 75.5
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 2.0e-74 283.1 268 58.6
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.0e-71 271.6 270 54.8
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 6.0e-71 271.6 270 54.4
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.3e-70 270.4 269 55.8
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-48 197.6 270 41.9
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.3e-45 185.7 268 40.7
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.2e-40 169.1 267 39.7
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.6e-39 167.2 267 38.6
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.0e-38 164.5 246 40.7
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.8e-35 153.7 267 36.3
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 5.3e-35 152.1 271 37.6
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 5.3e-35 152.1 271 37.6
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.2e-32 142.9 245 38.0
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.7e-31 139.8 227 39.2
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.0e-31 138.7 245 36.3
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.9e-29 133.7 245 34.7
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 9.7e-29 131.3 277 33.6
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 5.3e-27 125.6 277 33.2
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 3.6e-23 112.8 228 33.3
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.3e-22 110.9 247 36.4
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.3e-22 110.9 272 30.5
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 5.1e-22 109.0 234 33.8
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 6.7e-22 108.6 244 32.8
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 2.5e-21 106.7 267 30.3
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 3.3e-21 106.3 220 32.3
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 4.3e-21 105.9 265 31.3
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.2e-20 103.6 285 30.2
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 4.8e-20 102.4 268 31.3
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 3.1e-19 99.8 267 29.2
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 5.3e-19 99.0 267 29.2
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 6.9e-19 98.6 242 34.7
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-18 97.4 276 31.5
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.6e-18 96.7 243 32.1
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 2.6e-18 96.7 230 30.9
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 1.0e-17 94.7 262 29.0
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 2.9e-17 93.2 245 29.0
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.8e-17 92.8 288 28.5
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.8e-17 92.8 179 35.2
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.5e-17 91.7 169 36.1
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 8.5e-17 91.7 268 30.2
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.1e-16 91.3 285 26.3
MELO3C032294.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-16 91.3 127 40.2
CANSAT01G1814 Cannabis sativa HOM05D007209 ORTHO05D000921 1.4e-16 90.9 264 28.4
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 7.2e-16 88.6 286 29.4
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.2e-15 87.8 270 27.8
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.1e-15 87.0 173 37.0
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.9e-15 85.1 274 27.4
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.0e-14 83.2 272 28.7
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 5.1e-14 82.4 271 26.6
CANSAT11G2265 Cannabis sativa HOM05D007209 ORTHO05D000921 6.7e-14 82.0 81 51.9
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.6e-13 80.1 116 38.8
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.4e-13 79.3 270 28.9
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 4.4e-13 79.3 271 26.9
CANSAT21G0095 Cannabis sativa HOM05D007209 ORTHO05D000921 5.7e-13 79.0 62 61.3
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 1.3e-12 77.8 292 26.0
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 1.7e-12 77.4 122 37.7
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.3e-12 75.5 149 33.6
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.2e-12 75.1 287 25.4
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 1.1e-11 74.7 94 39.4
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 1.8e-11 73.9 255 25.9
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.1e-11 73.2 264 26.1
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 4.1e-11 72.8 281 23.8
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.3e-11 72.4 276 25.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 5.3e-11 72.4 255 25.5
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 5.3e-11 72.4 287 25.1
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.0e-10 70.5 153 35.3
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.6e-10 70.1 268 23.5
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 2.6e-10 70.1 277 22.4
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 3.4e-10 69.7 269 26.0
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.7e-10 68.6 280 24.3
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 7.7e-10 68.6 278 23.4
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 7.7e-10 68.6 278 23.4
Atru.chr2.1871 Acer truncatum HOM05D001008 ORTHO05D003293 1.3e-09 67.8 258 25.6
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 1.3e-09 67.8 159 34.0
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 2.2e-09 67.0 64 46.9
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-09 67.0 246 25.2
Atru.chr6.630 Acer truncatum HOM05D003171 ORTHO05D000921 3.8e-09 66.2 257 23.7
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 3.8e-09 66.2 85 41.2
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 3.8e-09 66.2 171 29.8
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.0e-09 65.9 258 22.1
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 5.0e-09 65.9 281 24.9
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 6.5e-09 65.5 281 23.5
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 6.5e-09 65.5 120 33.3
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 6.5e-09 65.5 120 33.3
Eucgr.B02958 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.5e-09 65.1 280 24.3
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 8.5e-09 65.1 272 23.5
AUR62012087 Chenopodium quinoa HOM05D000665 ORTHO05D000921 1.4e-08 64.3 250 24.0
EL10Ac2g04750 Beta vulgaris HOM05D000665 ORTHO05D000921 1.9e-08 63.9 250 24.8
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.9e-08 63.9 280 23.6
MELO3C033464.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.2e-08 63.2 105 38.1
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 3.2e-08 63.2 275 24.7
Nn5g30764 Nelumbo nucifera HOM05D000665 ORTHO05D003147 3.2e-08 63.2 279 25.1
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 4.2e-08 62.8 277 23.1
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 7.2e-08 62.0 278 24.8
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 7.2e-08 62.0 155 30.3
Glyma.15G120200 Glycine max HOM05D007209 ORTHO05D000921 7.2e-08 62.0 275 24.0
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 7.2e-08 62.0 259 24.3
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 9.4e-08 61.6 131 29.8
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.4e-08 61.6 303 22.4
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 9.4e-08 61.6 283 24.0
Nitab4.5_0000072g0060 Nicotiana tabacum HOM05D000876 ORTHO05D000285 1.6e-07 60.8 69 40.6
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 1.6e-07 60.8 68 45.6
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.1e-07 60.5 247 25.9
PSO541G5140 Papaver somniferum HOM05D000665 ORTHO05D003147 2.1e-07 60.5 273 24.5
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 2.1e-07 60.5 283 23.3
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 2.7e-07 60.1 89 36.0
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 2.7e-07 60.1 240 23.8
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 3.6e-07 59.7 178 28.7
Eucgr.K03095 Eucalyptus grandis HOM05D000665 ORTHO05D000921 3.6e-07 59.7 294 23.8
FAN10G0934 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.6e-07 59.7 100 35.0
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-07 59.7 283 23.3
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.7e-07 59.3 71 42.3
Dinv16127 Davidia involucrata HOM05D007209 ORTHO05D000921 4.7e-07 59.3 68 39.7
FAN22G2177 Fragaria x ananassa HOM05D003171 ORTHO05D000921 4.7e-07 59.3 68 41.2
PSO732G0102 Papaver somniferum HOM05D000034 ORTHO05D000037 4.7e-07 59.3 109 33.0
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 4.7e-07 59.3 283 23.3
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 6.1e-07 58.9 243 23.9
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 6.1e-07 58.9 243 23.9
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 6.1e-07 58.9 243 23.9
Eucgr.E03640 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.1e-07 58.9 65 47.7
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.1e-07 58.9 252 25.0
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 6.1e-07 58.9 147 30.6
PSO063G5726 Papaver somniferum HOM05D000876 ORTHO05D000285 6.1e-07 58.9 107 34.6
PSO541G2915 Papaver somniferum HOM05D000876 ORTHO05D000285 6.1e-07 58.9 107 33.6
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 6.1e-07 58.9 283 23.3
PSO675G7404 Papaver somniferum HOM05D000665 ORTHO05D003147 8.0e-07 58.5 273 24.2
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 8.0e-07 58.5 283 23.3
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 8.0e-07 58.5 283 23.3
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 1.0e-06 58.2 68 41.2
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.0e-06 58.2 275 24.7
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.4e-06 57.8 278 25.5
CSS0049933 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.4e-06 57.8 71 40.8
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 1.4e-06 57.8 283 23.7
Psat0s2829g0240 Pisum sativum HOM05D011477 ORTHO05D000285 1.4e-06 57.8 65 38.5
RhsimUnG0122200 Rhododendron simsii HOM05D000153 ORTHO05D000921 1.4e-06 57.8 67 49.3
TAR419G0001 Trochodendron aralioides HOM05D019442 ORTHO05D000921 1.4e-06 57.8 233 21.9
Gorai.006G045600 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-06 57.4 68 36.8
PSO782G4265 Papaver somniferum HOM05D000876 ORTHO05D000285 1.8e-06 57.4 107 33.6
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.8e-06 57.4 258 22.9
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 2.3e-06 57.0 68 38.2
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.3e-06 57.0 71 40.8
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-06 57.0 248 24.6
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.3e-06 57.0 271 21.0
Eucgr.K00902 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.3e-06 57.0 65 46.2
Nn1g02974 Nelumbo nucifera HOM05D007209 ORTHO05D000921 2.3e-06 57.0 66 40.9
Cpa.g.sc19.224 Carica papaya HOM05D000876 ORTHO05D000285 3.0e-06 56.6 66 43.9
Nn2g15290 Nelumbo nucifera HOM05D007209 ORTHO05D000921 3.0e-06 56.6 64 43.8
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 3.9e-06 56.2 144 30.6
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 3.9e-06 56.2 68 42.6
Eucgr.I00904 Eucalyptus grandis HOM05D000665 ORTHO05D000285 5.2e-06 55.8 282 24.1
Nitab4.5_0000297g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.2e-06 55.8 69 37.7
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 5.2e-06 55.8 144 27.1
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 6.7e-06 55.5 263 23.2
HanXRQChr05g0143471 Helianthus annuus HOM05D000876 ORTHO05D000285 6.7e-06 55.5 68 38.2
HanXRQChr14g0461341 Helianthus annuus HOM05D000876 ORTHO05D000285 6.7e-06 55.5 68 38.2
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 6.7e-06 55.5 274 23.7
Rhsim05G0204000 Rhododendron simsii HOM05D007209 ORTHO05D000921 6.7e-06 55.5 67 47.8
Rhsim11G0031900 Rhododendron simsii HOM05D007209 ORTHO05D000921 6.7e-06 55.5 68 47.1
Rhsim12G0033100 Rhododendron simsii HOM05D007209 ORTHO05D000921 6.7e-06 55.5 67 47.8
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.8e-06 55.1 69 37.7
Gorai.007G232100 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.8e-06 55.1 68 35.3
HanXRQChr10g0300051 Helianthus annuus HOM05D000876 ORTHO05D000285 8.8e-06 55.1 88 34.1
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 8.8e-06 55.1 227 26.4
Zm00001eb162520 Zea mays HOM05D011791 ORTHO05D000285 8.8e-06 55.1 66 39.4


User provided reference genes

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