Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 2.6e-196 688.7 393 100.0
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 2.1e-126 456.4 407 67.8
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 3.9e-112 409.1 413 62.2
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 3.2e-106 389.4 412 61.2
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 4.6e-105 385.6 408 61.0
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.5e-50 204.5 251 51.8
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 3.3e-50 203.4 418 40.4
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.4e-45 187.2 391 39.1
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 1.2e-44 184.9 464 36.2
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 2.7e-44 183.7 395 38.7
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.3e-42 176.4 389 38.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 9.5e-42 175.3 281 45.9
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 9.5e-42 175.3 488 32.0
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 6.2e-41 172.6 498 36.7
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.4e-40 171.4 309 43.4
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.4e-40 171.4 463 35.9
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.4e-40 170.6 455 33.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.1e-40 170.2 401 35.9
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.0e-40 169.9 378 39.9
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 5.2e-40 169.5 467 34.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.2e-39 168.3 541 31.4
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 2.6e-39 167.2 214 50.9
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 2.6e-39 167.2 456 36.2
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 3.4e-39 166.8 560 32.9
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 5.8e-39 166.0 191 55.0
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 5.8e-39 166.0 163 59.5
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 9.9e-39 165.2 433 35.8
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.7e-38 164.5 393 35.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 2.2e-38 164.1 164 56.7
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.9e-38 163.7 166 57.2
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 4.9e-38 162.9 404 34.9
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 4.9e-38 162.9 163 59.5
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 4.9e-38 162.9 389 36.0
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 6.4e-38 162.5 463 34.1
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 8.4e-38 162.2 269 44.6
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.1e-37 161.8 161 57.8
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 4.1e-37 159.8 438 33.8
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 5.4e-37 159.5 456 36.0
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 7.1e-37 159.1 388 38.4
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 9.2e-37 158.7 338 38.8
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.2e-36 158.3 225 45.3
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.6e-36 157.9 394 35.5
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.1e-36 157.5 436 35.3
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 2.1e-36 157.5 405 35.6
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 4.6e-36 156.4 407 33.9
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 7.8e-36 155.6 119 67.2
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.0e-35 155.2 144 59.7
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 6.6e-35 152.5 415 35.4
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 6.6e-35 152.5 112 71.4
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 8.7e-35 152.1 404 35.4
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.5e-34 151.4 424 34.0
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.9e-34 151.0 454 33.3
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.3e-34 150.2 275 42.2
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 5.6e-34 149.4 293 40.6
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 5.6e-34 149.4 116 64.7
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 9.6e-34 148.7 392 34.4
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 9.6e-34 148.7 433 34.2
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 1.6e-33 147.9 155 54.8
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 2.8e-33 147.1 397 34.5
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.7e-33 146.4 87 77.0
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 8.1e-33 145.6 458 34.1
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 8.1e-33 145.6 251 43.4
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.4e-32 144.8 426 32.4
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.8e-32 144.4 418 34.0
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.4e-32 144.1 401 34.2
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 5.2e-32 142.9 133 54.9
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 6.9e-32 142.5 258 41.9
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.2e-31 141.7 159 50.9
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-31 141.0 118 64.4
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 2.0e-31 141.0 118 64.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 2.0e-31 141.0 118 64.4
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.0e-31 141.0 454 30.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 2.0e-31 141.0 459 30.9
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.6e-31 140.6 414 34.3
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.4e-31 140.2 146 53.4
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.4e-31 140.2 458 33.6
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 4.4e-31 139.8 395 33.4
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 5.8e-31 139.4 381 32.5
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 7.6e-31 139.0 267 41.9
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.3e-30 138.3 398 33.9
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.3e-30 138.3 156 50.0
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.7e-30 137.9 117 65.8
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 2.2e-30 137.5 388 37.4
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 3.8e-30 136.7 137 58.4
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 6.4e-30 136.0 133 59.4
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 8.4e-30 135.6 133 59.4
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.4e-29 134.8 279 38.7
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.4e-29 134.0 257 41.2
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 3.2e-29 133.7 411 33.3
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 5.4e-29 132.9 114 63.2
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 5.4e-29 132.9 114 63.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 7.1e-29 132.5 127 59.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 7.1e-29 132.5 387 35.1
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 7.1e-29 132.5 400 34.0
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 3.5e-28 130.2 418 34.0
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 6.0e-28 129.4 399 34.1
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 7.8e-28 129.0 391 32.0
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 7.8e-28 129.0 381 32.3
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.3e-27 128.3 256 41.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-26 125.2 139 52.5
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-26 125.2 139 52.5
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.1e-26 125.2 296 38.9
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.9e-26 124.4 390 33.3
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 2.5e-26 124.0 160 50.6
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 5.6e-26 122.9 283 35.3
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 1.6e-25 121.3 102 64.7
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.6e-25 121.3 230 40.0
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.1e-25 120.9 251 39.0
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.6e-25 120.2 419 34.6
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.4e-24 118.2 537 29.8
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.4e-24 118.2 237 39.7
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 5.8e-23 112.8 72 72.2
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.9e-21 107.8 102 61.8
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 2.4e-21 107.5 98 63.3
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.4e-21 107.5 143 45.5
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.9e-19 100.1 60 78.3
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.1e-18 98.6 92 57.6
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.5e-18 98.2 416 32.7
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 3.7e-17 93.6 253 34.8
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.7e-17 93.6 215 39.1
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 6.2e-17 92.8 206 37.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.7e-12 77.4 468 28.0
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.3e-11 75.1 95 52.6
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 3.0e-11 73.9 237 34.6
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 5.1e-11 73.2 223 33.6
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 5.1e-11 73.2 322 32.3
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 4.3e-10 70.1 63 63.5
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 5.6e-10 69.7 52 61.5
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 8.2e-09 65.9 364 28.8
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 2.4e-08 64.3 34 85.3
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 2.4e-08 64.3 34 85.3


User provided reference genes

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