Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024358 Sechium edule HOM05D007933 ORTHO05D000001 1.5e-107 392.9 198 100.0
Sed0011392 Sechium edule HOM05D007933 ORTHO05D000001 1.7e-55 219.9 197 64.0
ClCG01G014520 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.2e-37 160.6 208 45.2
ClCG04G001080 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.1e-35 154.1 197 48.7
ClCG09G016870 Citrullus lanatus HOM05D007933 ORTHO05D000001 4.5e-32 142.1 203 42.4
ClCG11G009880 Citrullus lanatus HOM05D006073 ORTHO05D007354 1.2e-29 134.0 187 42.2
ClCG01G016080 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.4e-27 125.6 224 40.2
ClCG10G009120 Citrullus lanatus HOM05D007933 ORTHO05D000001 9.7e-27 124.4 206 42.7
Sed0022044 Sechium edule HOM05D007933 ORTHO05D000001 1.7e-26 123.6 198 45.5
ClCG05G012250 Citrullus lanatus HOM05D000002 ORTHO05D000001 8.2e-26 121.3 172 41.3
ClCG03G009350 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.9e-24 115.2 187 40.6
Sed0027111 Sechium edule HOM05D007933 ORTHO05D000001 1.1e-22 110.9 94 62.8
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 3.0e-20 102.8 193 34.2
ClCG01G008460 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.2e-19 100.9 214 37.9
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.2e-19 100.9 200 36.0
ClCG03G011460 Citrullus lanatus HOM05D007933 ORTHO05D000001 7.5e-19 98.2 94 56.4
Sed0027751 Sechium edule HOM05D007933 ORTHO05D000001 1.7e-18 97.1 94 58.5
CANSAT01G0981 Cannabis sativa HOM05D007933 ORTHO05D000001 2.8e-18 96.3 187 35.3
CsaV3_7G021100 Cucumis sativus L. HOM05D007933 ORTHO05D000001 2.8e-18 96.3 94 56.4
TPR.G529 Trifolium pratense HOM05D007933 ORTHO05D000001 3.7e-18 95.9 181 34.8
TPR.G36530 Trifolium pratense HOM05D007933 ORTHO05D000001 4.8e-18 95.5 181 34.8
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 6.3e-18 95.1 183 33.3
Sed0005981 Sechium edule HOM05D007933 ORTHO05D000001 8.3e-18 94.7 150 43.3
Sed0012354 Sechium edule HOM05D007933 ORTHO05D000001 3.1e-17 92.8 190 33.7
ClCG05G014660 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.4e-17 92.0 142 43.0
Cpa.g.sc47.46 Carica papaya HOM05D012279 ORTHO05D000001 9.1e-17 91.3 185 33.0
MELO3C033606.2 Cucumis melo HOM05D007933 ORTHO05D000001 9.1e-17 91.3 88 59.1
CsaV3_1G033790 Cucumis sativus L. HOM05D007933 ORTHO05D000001 9.1e-17 91.3 93 54.8
Sed0025673 Sechium edule HOM05D007933 ORTHO05D000001 9.1e-17 91.3 82 63.4
TPR.G833 Trifolium pratense HOM05D000002 ORTHO05D000001 1.2e-16 90.9 182 35.7
Sed0018564 Sechium edule HOM05D007933 ORTHO05D000001 2.7e-16 89.7 127 44.9
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.0e-15 87.8 177 33.3
ClCG11G011580 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.3e-15 87.4 94 51.1
Sed0002532 Sechium edule HOM05D007933 ORTHO05D000001 4.2e-14 82.4 182 37.4
ClCG05G013640 Citrullus lanatus HOM05D007933 ORTHO05D000001 1.2e-13 80.9 95 48.4
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-13 80.9 182 28.6
CANSAT56G4524 Cannabis sativa HOM05D007933 ORTHO05D000001 2.7e-13 79.7 165 34.5
MELO3C011560.2 Cucumis melo HOM05D007933 ORTHO05D000001 3.6e-13 79.3 62 58.1
Sed0005741 Sechium edule HOM05D007933 ORTHO05D000001 1.4e-12 77.4 98 48.0
CANSAT35G1764 Cannabis sativa HOM05D007933 ORTHO05D000001 1.8e-12 77.0 159 35.8
CANSAT21G0774 Cannabis sativa HOM05D007933 ORTHO05D000001 4.0e-12 75.9 158 35.4
ClCG10G007080 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.2e-12 75.5 174 35.6
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-12 75.5 202 26.7
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 8.8e-12 74.7 186 30.1
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-11 73.9 180 32.2
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.5e-11 73.9 190 31.1
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-11 73.6 198 29.3
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-11 73.6 208 26.4
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 4.4e-11 72.4 180 28.3
MELO3C025171.2 Cucumis melo HOM05D007933 ORTHO05D000001 5.7e-11 72.0 65 55.4
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-11 71.6 178 29.8
ClCG03G011920 Citrullus lanatus HOM05D007933 ORTHO05D000001 7.5e-11 71.6 46 71.7
CANSAT11G1034 Cannabis sativa HOM05D007933 ORTHO05D000001 9.8e-11 71.2 158 32.3
ClCG03G008340 Citrullus lanatus HOM05D007933 ORTHO05D000001 9.8e-11 71.2 73 52.1
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.5 197 28.9
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 3.7e-10 69.3 198 29.3
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-10 69.3 196 27.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-10 68.9 199 31.2
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 4.9e-10 68.9 184 27.7
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 4.9e-10 68.9 174 27.6
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 4.9e-10 68.9 192 28.6
Sed0024797 Sechium edule HOM05D000002 ORTHO05D000001 4.9e-10 68.9 56 57.1
CsaV3_3G044130 Cucumis sativus L. HOM05D007933 ORTHO05D000001 6.3e-10 68.6 73 52.1
PSO384G4697 Papaver somniferum HOM05D000002 ORTHO05D000001 6.3e-10 68.6 194 28.9
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-10 68.2 197 28.4
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-10 68.2 198 26.3
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 8.3e-10 68.2 187 29.4
FvH4_4g05782 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-09 67.8 197 29.4
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-09 67.8 170 28.2
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-09 67.8 184 29.3
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-09 67.4 178 28.7
FvH4_4g05872 Fragaria vesca HOM05D000002 ORTHO05D000001 1.4e-09 67.4 197 29.4
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 1.4e-09 67.4 195 28.2
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-09 67.4 200 32.0
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.4e-09 66.6 198 26.3
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 3.1e-09 66.2 197 27.4
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 4.1e-09 65.9 195 26.2
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.1e-09 65.9 181 24.3
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-09 65.9 204 27.0
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 5.4e-09 65.5 187 26.7
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 7.0e-09 65.1 191 27.2
ClCG04G011870 Citrullus lanatus HOM05D000002 ORTHO05D000001 9.2e-09 64.7 71 47.9
ClCG08G002140 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.2e-08 64.3 184 29.3
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 63.9 202 27.7
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 1.6e-08 63.9 188 28.2
Sed0025241 Sechium edule HOM05D000002 ORTHO05D000001 1.6e-08 63.9 61 45.9
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-08 63.5 190 27.4
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.0e-08 63.5 186 24.7
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-08 63.5 197 29.4
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.0e-08 63.5 173 27.2
CANSAT25G3541 Cannabis sativa HOM05D007933 ORTHO05D000001 2.7e-08 63.2 84 44.0
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 2.7e-08 63.2 179 26.3
ClCG11G006400 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.5e-08 62.8 125 35.2
CsaV3_1G011150 Cucumis sativus L. HOM05D040236 ORTHO05D000001 3.5e-08 62.8 90 38.9
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 3.5e-08 62.8 168 28.6
ClCG08G001760 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.9e-08 62.0 49 63.3
ClCG08G001770 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.9e-08 62.0 72 43.1
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.9e-08 62.0 191 25.7
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.9e-08 62.0 195 25.1
ClCG01G011620 Citrullus lanatus HOM05D007933 ORTHO05D010776 7.7e-08 61.6 51 58.8
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-08 61.6 195 29.2
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 7.7e-08 61.6 183 25.1
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 61.2 182 26.4
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-07 61.2 181 23.8
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 60.8 205 27.3
PSO421G0367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-07 60.8 170 29.4
ClCG03G014130 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.7e-07 60.5 41 63.4
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 1.7e-07 60.5 178 28.1
MELO3C010447.2 Cucumis melo HOM05D007933 ORTHO05D000001 2.3e-07 60.1 51 49.0
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 60.1 177 27.7
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 2.3e-07 60.1 190 25.8
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-07 60.1 189 26.5
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-07 60.1 190 26.3
ClCG01G014270 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.9e-07 59.7 35 74.3
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 2.9e-07 59.7 174 26.4
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-07 59.7 172 27.3
RcHm_v2.0_Chr7g0206011 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-07 59.7 178 28.1
ClCG05G015920 Citrullus lanatus HOM05D058504 ORTHO05D000001 3.8e-07 59.3 115 34.8
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.8e-07 59.3 200 26.0
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-07 59.3 184 26.6
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 3.8e-07 59.3 184 25.5
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 3.8e-07 59.3 177 28.2
ClCG03G013390 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.0e-07 58.9 49 57.1
ClCG07G006470 Citrullus lanatus HOM05D007933 ORTHO05D000001 5.0e-07 58.9 88 45.5
FvH4_5g20624 Fragaria vesca HOM05D000002 ORTHO05D000001 5.0e-07 58.9 178 29.2
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 5.0e-07 58.9 182 26.4
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-07 58.9 178 25.3
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.0e-07 58.9 182 23.6
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 5.0e-07 58.9 181 28.7
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-07 58.5 177 28.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 6.6e-07 58.5 199 26.1
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 6.6e-07 58.5 172 23.8
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-07 58.2 180 27.8
ClCG07G008600 Citrullus lanatus HOM05D000002 ORTHO05D000001 8.6e-07 58.2 43 55.8
ClCG08G001120 Citrullus lanatus HOM05D000002 ORTHO05D000001 8.6e-07 58.2 68 41.2
CsaV3_4G026980 Cucumis sativus L. HOM05D007933 ORTHO05D000001 8.6e-07 58.2 95 41.1
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 8.6e-07 58.2 187 25.1
Sabra15G0130700 Salix brachista HOM05D000432 ORTHO05D000001 8.6e-07 58.2 182 26.9
ClCG06G011650 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.1e-06 57.8 43 58.1
Sabra02G0139200 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-06 57.8 175 31.4
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 57.4 183 28.4
ClCG05G012400 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.5e-06 57.4 40 62.5
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 1.5e-06 57.4 183 27.3
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-06 57.0 197 23.9
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.9e-06 57.0 85 36.5
FvH4_2g26161 Fragaria vesca HOM05D000083 ORTHO05D001732 1.9e-06 57.0 182 28.0
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 1.9e-06 57.0 180 26.1
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.9e-06 57.0 183 26.2
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-06 57.0 181 26.5
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-06 57.0 182 25.8
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.5e-06 56.6 99 31.3
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.5e-06 56.6 193 26.9
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.5e-06 56.6 182 26.4
Atru.chr2.3010 Acer truncatum HOM05D000002 ORTHO05D000001 3.3e-06 56.2 183 26.2
ClCG02G008950 Citrullus lanatus HOM05D007933 ORTHO05D000001 3.3e-06 56.2 49 51.0
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-06 56.2 182 25.8
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 3.3e-06 56.2 192 28.6
CANSAT78G1493 Cannabis sativa HOM05D000002 ORTHO05D000001 4.3e-06 55.8 165 27.9
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 4.3e-06 55.8 180 25.0
Ca_18488_v3 Cicer arietinum L. HOM05D008404 ORTHO05D000001 5.6e-06 55.5 196 28.1
Ca_29541_v3 Cicer arietinum L. HOM05D008404 ORTHO05D000001 5.6e-06 55.5 196 28.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.6e-06 55.5 176 25.0
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 5.6e-06 55.5 183 29.0
RcHm_v2.0_Chr1g0366871 Rosa chinensis HOM05D000062 ORTHO05D000043 5.6e-06 55.5 176 26.7
RcHm_v2.0_Chr4g0431731 Rosa chinensis HOM05D009166 ORTHO05D000001 5.6e-06 55.5 188 25.5
RcHm_v2.0_Chr5g0058511 Rosa chinensis HOM05D009166 ORTHO05D000001 5.6e-06 55.5 188 25.5
CSS0021451 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-06 55.1 180 24.4
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 7.3e-06 55.1 96 33.3
ClCG09G017420 Citrullus lanatus HOM05D007933 ORTHO05D000001 7.3e-06 55.1 85 42.4
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 7.3e-06 55.1 165 24.8
Nitab4.5_0000342g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.3e-06 55.1 156 27.6
ClCG03G004400 Citrullus lanatus HOM05D007933 ORTHO05D000001 9.5e-06 54.7 51 51.0
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 9.5e-06 54.7 177 26.0
PGR142G2373 Punica granatum HOM05D027407 ORTHO05D000001 9.5e-06 54.7 175 24.6
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.5e-06 54.7 179 23.5


User provided reference genes

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