Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024338 Sechium edule HOM05D005674 ORTHO05D007015 1.3e-72 277.7 362 100.0
Sed0008626 Sechium edule HOM05D005674 ORTHO05D007015 9.4e-28 128.6 81 74.1
CsaV3_4G030900 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.4e-26 124.8 78 78.2
CiPaw.03G192600 Carya illinoinensis HOM05D005674 ORTHO05D007015 1.8e-26 124.4 80 73.8
Cfa012588 Carpinus fangiana HOM05D005674 ORTHO05D007015 7.5e-25 119.0 79 69.6
QL08p042254 Quercus lobata HOM05D005674 ORTHO05D007015 7.5e-25 119.0 79 73.4
ClCG07G002660 Citrullus lanatus HOM05D005674 ORTHO05D007015 9.8e-25 118.6 80 71.2
Manes.08G068200 Manihot esculenta HOM05D005674 ORTHO05D007015 4.1e-23 113.2 78 69.2
CSS0001557 Camellia sinensis var. sinensis HOM05D005674 ORTHO05D007015 1.2e-22 111.7 80 66.2
GSVIVG01024415001 Vitis vinifera HOM05D005674 ORTHO05D007015 1.6e-22 111.3 77 63.6
DCAR_018956 Daucus carota HOM05D005674 ORTHO05D007015 2.0e-22 110.9 79 68.4
Manes.09G079700 Manihot esculenta HOM05D005674 ORTHO05D007015 2.7e-22 110.5 79 65.8
Dinv12372 Davidia involucrata HOM05D005674 ORTHO05D007015 4.5e-22 109.8 76 67.1
VMungo1309G1849 Vigna mungo HOM05D005674 ORTHO05D007015 3.8e-21 106.7 79 62.0
Hma1.2p1_0067F.1_g036940 Hydrangea macrophylla HOM05D005674 ORTHO05D007015 6.5e-21 105.9 79 64.6
Lj1P677T28 Lonicera japonica HOM05D005674 ORTHO05D007015 1.1e-20 105.1 79 60.8
arahy.Tifrunner.gnm1.ann1.MAGV51 Arachis hypogaea HOM05D005674 ORTHO05D007015 4.2e-20 103.2 79 57.0
arahy.Tifrunner.gnm1.ann1.U482D3 Arachis hypogaea HOM05D005674 ORTHO05D007015 4.2e-20 103.2 79 57.0
CAN.G1360.18 Capsicum annuum HOM05D005674 ORTHO05D007015 5.5e-20 102.8 79 60.8
Thecc.01G153300 Theobroma cacao HOM05D005674 ORTHO05D007015 5.5e-20 102.8 76 63.2
Duzib160G0406 Durio zibethinus HOM05D005674 ORTHO05D007015 9.5e-20 102.1 79 60.8
Sc04g0009990 Simmondsia chinensis HOM05D005674 ORTHO05D007015 1.2e-19 101.7 78 64.1
MD07G1055100 Malus domestica HOM05D005674 ORTHO05D007015 2.1e-19 100.9 79 57.0
Actinidia00858 Actinidia chinensis HOM05D005674 ORTHO05D007015 2.8e-19 100.5 79 60.8
CANSAT54G2399 Cannabis sativa HOM05D005674 ORTHO05D007015 2.8e-19 100.5 77 61.0
Gorai.011G295800 Gossypium raimondii HOM05D005674 ORTHO05D007015 6.1e-19 99.4 79 57.0
Psat0s443g0080 Pisum sativum HOM05D005674 ORTHO05D007015 6.1e-19 99.4 79 55.7
Solyc07g055220.3 Solanum lycopersicum HOM05D005674 ORTHO05D007015 6.1e-19 99.4 79 58.2
Sopen07g027000 Solanum pennellii HOM05D005674 ORTHO05D007015 6.1e-19 99.4 79 58.2
Gohir.A10G242800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 8.0e-19 99.0 78 57.7
Rhsim04G0075800 Rhododendron simsii HOM05D005674 ORTHO05D007015 8.0e-19 99.0 79 60.8
PGSC0003DMG401020415 Solanum tuberosum HOM05D005674 ORTHO05D007015 8.0e-19 99.0 79 59.5
Gohir.D10G254800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 1.0e-18 98.6 79 57.0
Gorai.013G183800 Gossypium raimondii HOM05D005674 ORTHO05D007015 1.0e-18 98.6 78 57.7
arahy.Tifrunner.gnm1.ann1.I145LQ Arachis hypogaea HOM05D005674 ORTHO05D007015 1.4e-18 98.2 74 56.8
Dinv11955 Davidia involucrata HOM05D005674 ORTHO05D007015 1.4e-18 98.2 71 64.8
Cpa.g.sc90.66 Carica papaya HOM05D005674 ORTHO05D007015 2.3e-18 97.4 78 60.3
Ca_14577_v3 Cicer arietinum L. HOM05D005674 ORTHO05D007015 3.0e-18 97.1 79 55.7
MELO3C033809.2 Cucumis melo HOM05D005674 ORTHO05D007015 3.0e-18 97.1 71 66.2
Sabra06G0005200 Salix brachista HOM05D005674 ORTHO05D007015 3.0e-18 97.1 77 59.7
Gohir.A13G157000 Gossypium hirsutum HOM05D005674 ORTHO05D007015 4.0e-18 96.7 81 53.1
Lalb_Chr01g0007701 Lupinus albus HOM05D005674 ORTHO05D007015 4.0e-18 96.7 79 55.7
Atru.chr7.2335 Acer truncatum HOM05D005674 ORTHO05D007015 6.8e-18 95.9 79 54.4
arahy.Tifrunner.gnm1.ann1.JH6JIJ Arachis hypogaea HOM05D005674 ORTHO05D007015 8.9e-18 95.5 76 53.9
Ciclev10008244m.g Citrus clementina HOM05D005674 ORTHO05D007015 8.9e-18 95.5 79 53.2
Gohir.D13G161800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 8.9e-18 95.5 77 57.1
Prupe.4G280300 Prunus persica HOM05D005674 ORTHO05D007015 1.2e-17 95.1 79 57.0
MD15G1427800 Malus domestica HOM05D005674 ORTHO05D007015 2.0e-17 94.4 79 50.6
CsaV3_5G005440 Cucumis sativus L. HOM05D005674 ORTHO05D007015 2.6e-17 94.0 77 59.7
Prupe.3G114500 Prunus persica HOM05D005674 ORTHO05D007015 5.7e-17 92.8 79 50.6
MBI15_g37633_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 7.5e-17 92.4 77 55.8
Glyma.03G075500 Glycine max HOM05D005674 ORTHO05D007015 9.8e-17 92.0 80 52.5
Lj3g0025693 Lotus japonicus HOM05D005674 ORTHO05D007015 1.3e-16 91.7 77 54.5
Phvul.009G126100 Phaseolus vulgaris HOM05D005674 ORTHO05D007015 1.7e-16 91.3 79 55.7
CAN.G625.40 Capsicum annuum HOM05D005674 ORTHO05D007015 2.2e-16 90.9 77 58.4
Solyc02g086230.2 Solanum lycopersicum HOM05D005674 ORTHO05D007015 2.2e-16 90.9 79 55.7
Sopen02g030910 Solanum pennellii HOM05D005674 ORTHO05D007015 2.2e-16 90.9 79 55.7
PGSC0003DMG400026386 Solanum tuberosum HOM05D005674 ORTHO05D007015 2.8e-16 90.5 79 54.4
TPR.G14745 Trifolium pratense HOM05D005674 ORTHO05D007015 2.8e-16 90.5 79 53.2
Potri.006G006500 Populus trichocarpa HOM05D005674 ORTHO05D007015 4.9e-16 89.7 77 54.5
TAR627G1060 Trochodendron aralioides HOM05D005674 ORTHO05D007015 1.1e-15 88.6 78 52.6
BcaC06g33618 Brassica carinata HOM05D005674 ORTHO05D007015 1.8e-15 87.8 79 54.4
Medtr7g024140 Medicago truncatula HOM05D005674 ORTHO05D007015 2.4e-15 87.4 76 53.9
RcHm_v2.0_Chr2g0130841 Rosa chinensis HOM05D005674 ORTHO05D007015 2.4e-15 87.4 79 55.7
TWI31G0445 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 2.4e-15 87.4 78 56.4
Hund00863 Selenicereus undatus HOM05D005674 ORTHO05D007015 4.1e-15 86.7 76 52.6
BolC7t45434H Brassica oleracea HOM05D005674 ORTHO05D007015 5.4e-15 86.3 78 53.8
PGR142G3640 Punica granatum HOM05D005674 ORTHO05D007015 5.4e-15 86.3 76 59.2
ECA240G0139 Erigeron canadensis HOM05D005674 ORTHO05D007015 1.2e-14 85.1 80 53.8
SGA_v2.0_scaffold18G08491 Striga asiatica HOM05D005674 ORTHO05D007015 1.2e-14 85.1 79 49.4
FvH4_6g27690 Fragaria vesca HOM05D005674 ORTHO05D007015 2.0e-14 84.3 79 51.9
Lsat_1_v5_gn_3_116841 Lactuca sativa HOM05D005674 ORTHO05D007015 2.0e-14 84.3 78 50.0
CARHR224650 Cardamine hirsuta HOM05D005674 ORTHO05D007015 2.7e-14 84.0 76 53.9
Lalb_Chr19g0127261 Lupinus albus HOM05D005674 ORTHO05D007015 3.5e-14 83.6 70 54.3
A03p50860 Brassica napus HOM05D005674 ORTHO05D007015 4.5e-14 83.2 77 53.2
BraA03t14173Z Brassica rapa HOM05D005674 ORTHO05D007015 4.5e-14 83.2 77 53.2
TPR.G15161 Trifolium pratense HOM05D005674 ORTHO05D007015 5.9e-14 82.8 79 50.6
HanXRQChr13g0421081 Helianthus annuus HOM05D005674 ORTHO05D007015 7.8e-14 82.4 76 52.6
TWI12G0566 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 7.8e-14 82.4 79 54.4
THA.LOC104806715 Tarenaya hassleriana HOM05D005674 ORTHO05D007015 1.0e-13 82.0 76 50.0
C07p49250 Brassica napus HOM05D005674 ORTHO05D007015 1.7e-13 81.3 74 54.1
Thhalv10025145m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 1.7e-13 81.3 79 49.4
Nitab4.5_0000249g0090 Nicotiana tabacum HOM05D005674 ORTHO05D007015 1.7e-13 81.3 76 52.6
COL.COLO4_33609 Corchorus olitorius HOM05D005674 ORTHO05D007015 3.8e-13 80.1 76 51.3
Sp2g11490 Schrenkiella parvula HOM05D005674 ORTHO05D007015 3.8e-13 80.1 77 53.2
AL8G11670 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 6.6e-13 79.3 77 53.2
Nitab4.5_0007923g0040 Nicotiana tabacum HOM05D005674 ORTHO05D007015 8.6e-13 79.0 79 49.4
Peaxi162Scf00888g00007 Petunia axillaris HOM05D005674 ORTHO05D007015 8.6e-13 79.0 66 57.6
CARHR174820 Cardamine hirsuta HOM05D005674 ORTHO05D007015 1.1e-12 78.6 77 53.2
SalBow4G2062 Salvia bowleyana HOM05D005674 ORTHO05D007015 1.5e-12 78.2 79 48.1
Cc05_g08520 Coffea canephora HOM05D005674 ORTHO05D007015 1.9e-12 77.8 79 43.0
Migut.F00129 Erythranthe guttata HOM05D005674 ORTHO05D007015 1.9e-12 77.8 79 44.3
Sp7g16190 Schrenkiella parvula HOM05D005674 ORTHO05D007015 1.9e-12 77.8 73 52.1
AUR62024049 Chenopodium quinoa HOM05D005674 ORTHO05D007015 2.5e-12 77.4 70 51.4
AUR62040438 Chenopodium quinoa HOM05D005674 ORTHO05D007015 2.5e-12 77.4 70 51.4
AL7G36590 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 3.3e-12 77.0 69 55.1
Aa31LG10G3050 Aethionema arabicum HOM05D005674 ORTHO05D007015 5.6e-12 76.3 77 51.9
A02p30210 Brassica napus HOM05D005674 ORTHO05D007015 5.6e-12 76.3 77 51.9
Carub.0007s2342 Capsella rubella HOM05D005674 ORTHO05D007015 5.6e-12 76.3 70 52.9
AT5G46680 Arabidopsis thaliana HOM05D005674 ORTHO05D007015 7.3e-12 75.9 77 50.6
BcaC03g16871 Brassica carinata HOM05D005674 ORTHO05D007015 7.3e-12 75.9 77 51.9
C02p47730 Brassica napus HOM05D005674 ORTHO05D007015 1.2e-11 75.1 77 51.9
BolC2t10809H Brassica oleracea HOM05D005674 ORTHO05D007015 1.2e-11 75.1 77 51.9
Aa31LG6G670 Aethionema arabicum HOM05D005674 ORTHO05D007015 1.6e-11 74.7 72 52.8
BraA02t08037Z Brassica rapa HOM05D005674 ORTHO05D007015 1.6e-11 74.7 77 51.9
Nitab4.5_0000753g0050 Nicotiana tabacum HOM05D005674 ORTHO05D007015 2.1e-11 74.3 76 48.7
PSO063G6562 Papaver somniferum HOM05D005674 ORTHO05D007015 6.1e-11 72.8 82 46.3
Carub.0008s0124 Capsella rubella HOM05D005674 ORTHO05D007015 8.0e-11 72.4 77 48.1
PSO782G5737 Papaver somniferum HOM05D005674 ORTHO05D007015 8.0e-11 72.4 78 47.4
HPP92_017208 Vanilla planifolia HOM05D005674 ORTHO05D007015 2.3e-10 70.9 63 52.4
TAR626G0412 Trochodendron aralioides HOM05D005674 ORTHO05D007015 4.0e-10 70.1 78 48.7
Os02g0793200 Oryza sativa ssp. japonica HOM05D005674 ORTHO05D007015 8.9e-10 68.9 74 45.9
CAN.G1360.17 Capsicum annuum HOM05D001556 ORTHO05D001505 1.5e-09 68.2 87 43.7
Lalb_Chr02g0159181 Lupinus albus HOM05D005674 ORTHO05D007015 1.5e-09 68.2 61 54.1
Nitab4.5_0007990g0010 Nicotiana tabacum HOM05D005674 ORTHO05D007015 2.0e-09 67.8 72 47.2
Thhalv10001221m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 3.4e-09 67.0 77 45.5
BcaC06g31458 Brassica carinata HOM05D005674 ORTHO05D007015 5.8e-09 66.2 80 43.8
Nn2g12528 Nelumbo nucifera HOM05D005674 ORTHO05D007015 1.3e-08 65.1 76 46.1
CAN.G1034.39 Capsicum annuum HOM05D005674 ORTHO05D033540 1.7e-08 64.7 46 63.0
Aqoxy3G02039 Aquilegia oxysepala HOM05D005674 ORTHO05D007015 2.9e-08 63.9 68 45.6
Lalb_Chr02g0154491 Lupinus albus HOM05D005674 ORTHO05D007015 2.9e-08 63.9 59 49.2
Zm00001eb201010 Zea mays HOM05D005674 ORTHO05D007015 4.9e-08 63.2 71 45.1
Lalb_Chr12g0209451 Lupinus albus HOM05D005674 ORTHO05D007015 5.4e-07 59.7 46 56.5


User provided reference genes

Program Settings