Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 5.1e-53 210.7 97 100.0
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 2.8e-51 204.9 97 96.9
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 8.1e-51 203.4 97 95.9
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 8.1e-51 203.4 97 95.9
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 1.4e-50 202.6 97 95.9
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 1.4e-50 202.6 97 95.9
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 2.4e-50 201.8 97 95.9
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 3.1e-50 201.4 97 95.9
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 3.1e-50 201.4 97 94.8
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 3.1e-50 201.4 97 94.8
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 3.1e-50 201.4 97 94.8
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 5.2e-50 200.7 97 94.8
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 5.2e-50 200.7 97 94.8
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 8.9e-50 199.9 97 93.8
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 8.9e-50 199.9 97 93.8
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 8.9e-50 199.9 97 94.8
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 8.9e-50 199.9 97 94.8
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 8.9e-50 199.9 97 94.8
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 1.2e-49 199.5 97 93.8
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 1.5e-49 199.1 97 94.8
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 1.5e-49 199.1 97 93.8
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 2.0e-49 198.7 97 93.8
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 2.0e-49 198.7 97 94.8
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 2.0e-49 198.7 97 93.8
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 92.8
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 92.8
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 2.6e-49 198.4 97 93.8
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 3.4e-49 198.0 97 92.8
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 3.4e-49 198.0 97 92.8
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 3.4e-49 198.0 97 93.8
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 4.4e-49 197.6 97 92.8
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 4.4e-49 197.6 97 92.8
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 92.8
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 92.8
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 92.8
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 92.8
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 93.8
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 5.8e-49 197.2 97 92.8
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 9.9e-49 196.4 97 92.8
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 9.9e-49 196.4 97 92.8
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 9.9e-49 196.4 95 93.7
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 1.3e-48 196.1 97 91.8
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 1.7e-48 195.7 97 91.8
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 2.2e-48 195.3 97 90.7
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 2.9e-48 194.9 97 91.8
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 2.9e-48 194.9 97 91.8
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 3.8e-48 194.5 97 90.7
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 3.8e-48 194.5 97 91.8
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 3.8e-48 194.5 97 91.8
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 6.4e-48 193.7 100 91.0
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 8.4e-48 193.4 97 90.7
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 8.4e-48 193.4 97 90.7
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 1.1e-47 193.0 108 86.1
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 1.4e-47 192.6 97 87.6
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 1.4e-47 192.6 97 90.7
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 1.4e-47 192.6 97 90.7
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 1.9e-47 192.2 97 90.7
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 1.9e-47 192.2 99 90.9
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 2.4e-47 191.8 96 90.6
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 3.2e-47 191.4 97 91.8
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 3.2e-47 191.4 100 90.0
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 7.1e-47 190.3 101 90.1
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 1.2e-46 189.5 91 95.6
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 1.6e-46 189.1 99 87.9
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 1.6e-46 189.1 97 89.7
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 2.1e-46 188.7 99 87.9
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 2.1e-46 188.7 99 87.9
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 2.1e-46 188.7 99 87.9
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 2.1e-46 188.7 99 87.9
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 2.7e-46 188.3 101 88.1
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 3.5e-46 188.0 99 87.9
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 3.5e-46 188.0 99 87.9
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 3.5e-46 188.0 99 87.9
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 3.5e-46 188.0 99 87.9
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 3.5e-46 188.0 97 89.7
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 4.6e-46 187.6 99 86.9
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 6.0e-46 187.2 99 86.9
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 1.3e-45 186.0 99 85.9
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 3.0e-45 184.9 99 85.9
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 3.0e-45 184.9 99 85.9
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 1.5e-44 182.6 123 73.2
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 5.6e-44 180.6 97 83.5
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 1.2e-43 179.5 97 83.5
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 4.7e-43 177.6 91 90.1
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 1.1e-42 176.4 91 87.9
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 2.4e-42 175.3 95 84.2
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 8.4e-40 166.8 90 80.0
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 2.4e-39 165.2 81 91.4
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 7.1e-39 163.7 99 81.8
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 9.3e-39 163.3 81 91.4
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 3.0e-37 158.3 93 77.4
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 1.5e-36 156.0 75 93.3
Hund23506 Selenicereus undatus HOM05D006758 ORTHO05D008326 2.8e-27 125.2 62 91.9
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 4.0e-26 121.3 95 57.9
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 9.0e-26 120.2 95 56.8
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 6.9e-18 94.0 43 93.0
Cre16.g689376 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 9.0e-18 93.6 77 55.8
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 2.6e-17 92.0 43 90.7
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 2.6e-17 92.0 43 90.7
Haze_06744 Corylus avellana HOM05D006758 ORTHO05D008326 2.9e-16 88.6 46 91.3
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 8.4e-16 87.0 45 93.3
FAN25G0357 Fragaria x ananassa HOM05D006758 ORTHO05D008326 1.1e-15 86.7 45 93.3
MBI02_g21861_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 1.4e-15 86.3 44 93.2
vmacro15829 Vaccinium macrocarpon HOM05D006758 ORTHO05D008326 1.9e-15 85.9 44 93.2
FAN21G3907 Fragaria x ananassa HOM05D006758 ORTHO05D008326 4.2e-15 84.7 53 81.1
QL05p074940 Quercus lobata HOM05D006758 ORTHO05D008326 5.5e-15 84.3 46 87.0
QL93p0073_0472 Quercus lobata HOM05D006758 ORTHO05D008326 5.5e-15 84.3 46 87.0
HPP92_000849 Vanilla planifolia HOM05D006758 ORTHO05D008326 7.1e-15 84.0 43 93.0
SalBow1G3298 Salvia bowleyana HOM05D006758 ORTHO05D008326 9.3e-15 83.6 45 88.9
MBI16_g27830_MAGBIO Magnolia biondii HOM05D004176 ORTHO05D008326 1.6e-14 82.8 51 74.5
Gohir.D06G213300 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.8e-13 79.3 40 90.0
MBI15_g03894_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 2.3e-13 79.0 51 70.6
Atru.BG.309.p Acer truncatum HOM05D006758 ORTHO05D008326 3.7e-11 71.6 39 89.7
PGSC0003DMG400002083 Solanum tuberosum HOM05D006758 ORTHO05D008326 1.3e-08 63.2 32 87.5


User provided reference genes

Program Settings