Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 4.2e-81 304.7 159 100.0
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 2.0e-38 162.9 120 78.3
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 1.1e-36 157.1 129 69.8
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 7.1e-36 154.5 129 70.5
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 6.0e-19 98.2 126 46.8
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 8.7e-18 94.4 127 45.7
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 5.6e-17 91.7 109 46.8
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 2.1e-16 89.7 129 41.9
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 3.6e-16 89.0 121 46.3
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 4.8e-16 88.6 125 43.2
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 1.5e-14 83.6 93 51.6
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 1.5e-14 83.6 128 41.4
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 2.6e-14 82.8 136 44.1
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 4.4e-14 82.0 121 39.7
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 5.8e-14 81.6 119 41.2
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 9.9e-14 80.9 114 43.0
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 9.9e-14 80.9 112 45.5
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 2.9e-13 79.3 124 42.7
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 3.8e-13 79.0 78 53.8
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 3.8e-13 79.0 118 40.7
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 6.4e-13 78.2 119 40.3
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.1e-12 77.4 119 42.0
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.4e-12 77.0 92 45.7
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.4e-12 76.3 125 40.8
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 7.1e-12 74.7 115 41.7
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.1e-11 73.2 117 43.6
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 2.1e-11 73.2 92 45.7
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 2.1e-11 73.2 92 45.7
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.7e-11 72.8 111 37.8
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 2.7e-11 72.8 73 54.8
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 3.5e-11 72.4 103 43.7
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 3.5e-11 72.4 151 36.4
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 4.6e-11 72.0 112 38.4
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 4.6e-11 72.0 112 39.3
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 6.0e-11 71.6 110 39.1
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 6.0e-11 71.6 111 45.0
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 7.9e-11 71.2 124 37.9
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 1.0e-10 70.9 138 39.1
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.3e-10 70.5 124 36.3
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 1.7e-10 70.1 91 41.8
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 1.7e-10 70.1 113 38.1
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 2.3e-10 69.7 85 41.2
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 3.0e-10 69.3 70 44.3
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 3.9e-10 68.9 109 41.3
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 3.9e-10 68.9 109 39.4
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 5.1e-10 68.6 113 35.4
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 5.1e-10 68.6 109 39.4
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.1e-09 67.4 108 43.5
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.3e-09 65.9 86 39.5
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 5.6e-09 65.1 137 36.5
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 1.3e-08 63.9 108 42.6
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.1e-08 63.2 132 37.1
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 2.8e-08 62.8 111 38.7
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 3.6e-08 62.4 62 45.2
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 3.6e-08 62.4 106 32.1
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 3.6e-08 62.4 118 36.4
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.8e-08 62.0 118 36.4
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 4.8e-08 62.0 118 36.4
ClCG09G021970 Citrullus lanatus HOM05D003636 ORTHO05D005160 8.1e-08 61.2 79 43.0
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 8.1e-08 61.2 106 36.8
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 8.1e-08 61.2 122 39.3
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.4e-07 60.5 84 41.7
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.8e-07 60.1 73 43.8
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.8e-07 60.1 70 50.0
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.1e-07 59.3 76 44.7
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 3.1e-07 59.3 109 35.8
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 4.0e-07 58.9 84 39.3
Os01g0938400 Oryza sativa ssp. japonica HOM05D024678 ORTHO05D025976 4.0e-07 58.9 56 50.0
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 9.0e-07 57.8 91 35.2
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 1.2e-06 57.4 50 56.0
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 1.5e-06 57.0 76 40.8
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 1.5e-06 57.0 107 37.4
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.0e-06 56.6 113 35.4
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 2.0e-06 56.6 91 35.2
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 2.0e-06 56.6 81 40.7
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 4.5e-06 55.5 108 33.3
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 4.5e-06 55.5 79 43.0
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 5.8e-06 55.1 35 62.9
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.8e-06 55.1 114 39.5
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 7.6e-06 54.7 112 37.5
Zm00001eb141720 Zea mays HOM05D024678 ORTHO05D025976 7.6e-06 54.7 62 45.2


User provided reference genes

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