Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2553.1 1264 100.0
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2360.1 1264 92.0
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2355.5 1264 91.9
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2348.5 1247 92.6
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1265 84.4
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1265 84.3
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2175.6 1265 84.0
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2172.5 1261 84.4
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1263 83.8
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2165.2 1267 83.3
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1269 83.7
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2161.3 1264 83.1
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2160.2 1266 83.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1266 83.2
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2156.3 1268 83.2
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1266 82.5
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2153.6 1266 83.2
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1263 83.6
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1266 82.9
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2149.4 1266 82.9
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2149.4 1267 83.0
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1266 82.5
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2145.2 1263 83.2
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1266 82.5
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2143.6 1263 82.9
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1266 82.5
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1263 82.8
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1266 82.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2140.5 1264 81.9
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1265 82.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2136.3 1266 81.8
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2135.9 1266 82.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2135.9 1263 82.6
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1262 81.9
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1266 82.7
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1264 82.0
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2132.8 1262 81.7
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2132.5 1262 81.7
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1269 82.2
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1259 82.8
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1267 81.8
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1266 81.5
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2128.6 1264 81.6
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2128.6 1269 81.4
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1266 81.8
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1264 81.7
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2127.8 1262 81.5
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1262 81.5
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1266 81.4
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1263 81.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2122.8 1265 82.6
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2121.7 1263 81.3
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2121.3 1266 81.2
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2120.5 1266 82.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2120.5 1263 81.9
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1262 81.5
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2119.4 1266 81.2
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2118.6 1263 81.2
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2116.7 1264 80.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2114.7 1266 82.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2113.6 1265 81.3
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2106.6 1265 81.0
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2105.5 1263 81.9
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2105.1 1264 81.6
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2103.2 1267 80.7
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2100.5 1265 80.8
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2100.5 1268 80.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2100.1 1266 81.5
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2099.3 1266 80.8
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2096.6 1264 80.5
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2096.2 1271 80.9
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2093.2 1263 81.0
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2088.5 1239 81.9
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2086.6 1266 81.2
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2085.8 1267 80.5
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2084.7 1265 80.3
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2083.9 1267 79.9
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2078.1 1267 80.0
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2073.5 1268 79.8
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2073.1 1267 79.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2067.7 1266 79.5
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2058.5 1249 80.5
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2057.3 1206 83.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2057.0 1277 79.6
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2051.9 1267 79.1
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2045.4 1267 78.6
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2043.1 1263 78.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2041.2 1267 78.6
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2031.5 1267 79.2
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2023.1 1266 78.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2009.6 1270 76.9
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1997.6 1266 77.6
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1983.0 1266 77.4
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1964.5 1264 76.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1925.2 1159 81.2
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1884.4 1268 72.9
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1850.9 1274 72.9
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1847.0 1267 71.2
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1815.0 1276 70.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1813.9 1068 81.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1807.3 1194 76.0
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1800.0 1249 71.6
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1773.4 1089 79.8
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1751.9 1128 77.0
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1750.3 1267 70.1
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1737.2 1264 69.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1585.9 962 79.0
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1531.5 1322 60.3
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1515.0 1046 72.0
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1359.7 812 81.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1337.8 1262 58.2
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1321.6 1331 53.5
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1310.4 1392 52.2
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1219.9 725 81.4
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1135.9 1018 60.3
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1090.1 809 68.6
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.5e-258 897.1 567 78.0
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.4e-256 890.6 1240 40.6
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 9.9e-250 867.8 502 84.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-218 762.3 694 57.1
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.1e-216 758.1 524 73.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.0e-198 696.8 451 78.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.5e-176 624.0 389 81.0
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 2.4e-126 458.0 359 64.6
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 5.3e-118 430.3 313 70.9
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.4e-105 389.0 270 73.0
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.9e-77 293.9 476 42.0
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.9e-68 265.0 169 74.6
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 9.5e-67 260.0 169 74.0
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.6e-66 258.1 169 73.4
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.2e-61 243.0 138 89.1
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.6e-59 234.2 234 55.1
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.1e-43 183.3 115 73.0
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 8.4e-39 167.2 152 63.8
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.1e-38 166.8 91 83.5
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.5e-35 156.4 182 52.2
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 7.8e-29 134.0 98 62.2
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.8e-26 125.6 104 59.6


User provided reference genes

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