Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.4e-187 658.7 335 100.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.5e-160 569.7 341 86.5
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.9e-160 569.3 341 86.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.4e-126 456.1 341 69.5
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.0e-124 448.4 340 67.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 6.5e-124 448.0 338 69.5
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 6.5e-124 448.0 343 67.9
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.2e-123 444.5 323 70.0
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.4e-123 444.1 293 74.4
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.6e-122 443.4 293 74.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.7e-122 442.6 323 69.7
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 6.1e-122 441.4 338 68.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.9e-122 441.0 298 72.8
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.4e-121 440.3 349 66.5
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.0e-121 439.1 337 67.7
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 5.2e-121 438.3 338 67.8
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 5.2e-121 438.3 285 75.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 8.8e-121 437.6 349 66.8
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.8e-121 437.6 323 68.7
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.3e-120 435.6 284 76.1
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 4.4e-120 435.3 338 66.9
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 5.7e-120 434.9 349 66.2
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.3e-119 433.7 339 67.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.7e-119 432.2 336 67.0
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 3.7e-119 432.2 335 66.6
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 4.8e-119 431.8 304 70.1
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.1e-118 430.6 290 73.1
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.4e-118 430.3 338 66.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.8e-118 429.9 397 60.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.1e-118 428.7 342 66.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.1e-118 428.7 307 70.7
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 5.3e-118 428.3 334 66.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 7.0e-118 427.9 333 65.8
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 9.1e-118 427.6 344 65.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 9.1e-118 427.6 331 66.5
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.6e-117 426.8 270 74.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.6e-117 426.8 294 69.4
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.0e-117 426.4 342 64.6
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 2.0e-117 426.4 342 64.6
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 3.5e-117 425.6 328 66.2
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.7e-117 424.5 343 64.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.0e-116 424.1 338 64.5
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.2e-116 422.9 339 65.8
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.9e-116 422.5 337 65.9
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 3.8e-116 422.2 308 70.5
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 8.5e-116 421.0 319 65.8
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.1e-115 420.6 330 66.4
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.1e-115 420.6 292 71.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.5e-115 418.3 320 67.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 9.4e-115 417.5 332 65.1
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.2e-114 417.2 323 67.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.1e-114 416.4 347 63.1
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.7e-114 416.0 315 69.5
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.7e-114 416.0 299 68.9
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 6.1e-114 414.8 309 68.3
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 8.0e-114 414.5 310 69.4
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 8.0e-114 414.5 308 67.9
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.0e-113 414.1 303 68.6
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.4e-113 413.7 258 76.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.8e-113 413.3 339 63.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.3e-113 412.9 320 65.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 6.7e-113 411.4 335 63.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.5e-112 410.2 327 64.5
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 3.3e-112 409.1 320 65.6
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 3.3e-112 409.1 319 65.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.7e-112 408.3 319 64.6
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 5.7e-112 408.3 320 65.6
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.7e-112 408.3 276 68.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.7e-112 408.3 308 67.9
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 5.7e-112 408.3 307 67.4
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 9.7e-112 407.5 285 69.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.2e-111 406.4 320 65.0
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.2e-111 406.4 325 64.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.2e-111 406.4 324 65.1
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 2.8e-111 406.0 320 64.1
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.1e-110 404.1 316 67.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.4e-110 403.7 385 59.2
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.8e-110 403.3 319 64.3
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.3e-108 397.1 409 54.0
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 8.5e-108 394.4 320 63.1
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 3.2e-107 392.5 259 74.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.2e-107 392.1 336 61.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.1e-106 389.8 288 68.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.2e-104 384.0 322 62.4
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.2e-104 384.0 280 69.3
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.4e-104 382.5 311 64.3
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 4.8e-103 378.6 333 58.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 5.4e-102 375.2 332 59.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.6e-100 367.9 407 49.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 8.0e-98 361.3 230 75.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.6e-96 356.3 325 60.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.5e-93 345.9 309 59.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.7e-85 319.7 217 73.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 7.8e-85 318.2 319 55.8
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 8.6e-84 314.7 324 49.7
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.6e-83 312.0 282 55.0
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 8.0e-82 308.1 320 54.4
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.6e-80 303.1 274 58.4
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.7e-76 290.4 248 56.5
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.3e-75 285.8 279 54.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.8e-73 280.4 258 51.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 9.5e-67 258.1 157 73.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 6.4e-63 245.4 147 78.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 8.4e-63 245.0 224 59.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.4e-55 218.8 163 67.5
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.9e-52 209.5 134 73.1
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 3.9e-52 209.5 267 42.7
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.9e-51 207.2 135 73.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 6.7e-44 182.2 134 63.4
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.1e-43 181.4 250 44.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.3e-36 157.1 97 76.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 8.4e-31 138.7 260 35.0
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 6.0e-29 132.5 291 34.0
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 5.7e-27 125.9 269 30.5
ClCG05G022980 Citrullus lanatus HOM05D004993 ORTHO05D008532 1.1e-19 101.7 84 70.2
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.3e-15 88.2 86 47.7
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.5e-14 82.8 99 45.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.5e-08 64.7 54 55.6


User provided reference genes

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