Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.1e-69 265.0 133 100.0
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 4.1e-61 238.0 133 88.7
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.5e-60 236.1 133 87.2
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 82.7
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 80.5
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 81.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.0e-56 223.4 133 81.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.4e-56 223.0 133 80.5
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.4e-56 223.0 133 79.7
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.3e-56 222.2 131 82.4
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 3.0e-56 221.9 133 78.9
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.9e-56 221.5 131 80.2
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 81.2
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.2
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.1e-56 221.1 129 82.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 8.8e-56 220.3 127 82.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.1e-55 219.9 132 81.8
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 78.9
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.3e-55 218.0 130 79.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 78.9
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 76.7
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 75.9
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 9.7e-55 216.9 133 78.2
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 9.7e-55 216.9 133 78.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.2
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 79.7
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 78.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.8e-54 215.3 133 77.4
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 6.3e-54 214.2 140 75.7
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 1.8e-53 212.6 133 77.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 75.2
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 78.9
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 5.3e-53 211.1 133 75.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 73.7
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 76.7
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.2e-52 209.9 130 76.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 2.6e-52 208.8 133 74.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 7.7e-52 207.2 133 75.9
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.3e-51 206.5 133 75.9
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.3e-51 206.5 133 76.7
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.7e-51 206.1 133 74.4
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 2.2e-51 205.7 133 72.2
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 2.9e-51 205.3 139 74.8
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 3.8e-51 204.9 134 75.4
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.8e-51 204.9 133 75.2
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 4.2e-50 201.4 128 73.4
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 3.6e-49 198.4 133 70.7
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 72.9
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.4e-48 196.4 116 81.0
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.4e-48 196.4 113 82.3
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 8.8e-48 193.7 118 74.6
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.6e-47 192.2 115 79.1
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 4.4e-47 191.4 181 55.8
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 5.7e-47 191.0 128 68.8
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 66.9
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 7.4e-47 190.7 176 56.8
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 66.9
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 2.2e-46 189.1 133 65.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 2.8e-46 188.7 114 80.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 3.7e-46 188.3 132 68.9
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 8.2e-46 187.2 133 64.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.1e-45 186.8 132 68.2
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.1e-45 186.8 133 64.7
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 3.1e-45 185.3 133 63.9
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.5e-44 183.0 133 64.7
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.5e-44 183.0 133 63.9
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.0e-43 180.3 130 73.1
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 2.5e-42 175.6 118 72.0
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 5.5e-42 174.5 105 81.0
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 4.7e-41 171.4 128 65.6
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 1.0e-40 170.2 137 60.6
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.4e-40 169.9 131 59.5
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 2.3e-40 169.1 105 74.3
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.3e-39 165.2 98 79.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 5.7e-39 164.5 126 61.9
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 3.7e-38 161.8 126 57.1
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 8.2e-38 160.6 99 75.8
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.8e-37 159.5 105 68.6
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.1e-37 158.3 105 72.4
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 3.5e-36 155.2 93 76.3
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 5.9e-36 154.5 98 72.4
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.2e-35 152.5 96 71.9
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 8.0e-33 144.1 129 54.3
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 4.4e-31 138.3 114 53.5
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 6.3e-30 134.4 133 57.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.3e-29 131.3 133 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 6.5e-27 124.4 111 54.1
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 6.1e-25 117.9 70 78.6
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.3e-22 110.2 130 43.8
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.8e-21 106.3 102 51.0
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 2.3e-19 99.4 109 45.9
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 5.0e-19 98.2 130 40.8
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.1e-18 97.1 62 75.8
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.2e-17 93.6 67 65.7
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 1.4e-13 80.1 70 58.6
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 4.5e-12 75.1 47 68.1
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 2.3e-11 72.8 89 43.8
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 3.9e-11 72.0 73 43.8
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 5.8e-07 58.2 55 58.2
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 8.3e-06 54.3 34 58.8


User provided reference genes

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