Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.3e-99 365.5 180 100.0
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.0e-59 233.8 152 80.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.5e-58 229.9 152 78.9
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.3e-51 206.1 196 59.2
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.3e-46 190.3 144 66.0
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 2.9e-46 189.1 145 64.8
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.1e-45 187.2 134 67.9
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.6e-44 183.3 131 67.2
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.6e-44 182.2 151 60.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.6e-44 182.2 146 63.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 3.6e-44 182.2 144 59.0
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 6.1e-44 181.4 147 59.2
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 6.1e-44 181.4 129 68.2
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.0e-43 180.6 130 65.4
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.0e-43 179.1 140 60.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 5.2e-43 178.3 149 59.7
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 6.7e-43 177.9 147 61.2
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 8.8e-43 177.6 148 61.5
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 8.8e-43 177.6 145 60.7
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.2e-42 177.2 129 66.7
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.5e-42 176.8 143 61.5
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.5e-42 176.8 130 65.4
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.6e-42 176.0 141 61.0
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 4.4e-42 175.3 130 66.2
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 4.4e-42 175.3 147 59.2
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.4e-42 175.3 129 64.3
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 7.5e-42 174.5 142 62.7
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 7.5e-42 174.5 162 54.9
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 7.5e-42 174.5 140 60.7
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.2e-41 172.9 143 62.2
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.2e-41 172.9 144 60.4
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.2e-41 172.9 147 59.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 2.2e-41 172.9 142 62.0
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.2e-41 172.9 130 64.6
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.2e-41 172.9 140 60.0
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 3.7e-41 172.2 129 63.6
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 4.8e-41 171.8 151 60.3
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 6.3e-41 171.4 129 64.3
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.1e-40 170.6 140 60.7
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.1e-40 170.6 134 62.7
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-40 170.2 149 57.7
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-40 170.2 149 57.7
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-40 170.2 149 57.7
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 1.8e-40 169.9 144 58.3
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-40 169.1 149 57.7
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 9.1e-40 167.5 146 57.5
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.7e-39 166.0 129 63.6
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.9e-39 164.9 155 54.2
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.0e-38 164.1 145 55.9
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 1.3e-38 163.7 129 59.7
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.7e-38 163.3 145 57.9
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.7e-38 163.3 138 60.1
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.5e-37 160.2 130 58.5
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.9e-37 159.8 147 57.8
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.5e-37 159.5 147 53.7
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.6e-36 156.8 149 53.7
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 4.7e-36 155.2 151 54.3
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 6.1e-36 154.8 149 53.7
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 8.0e-36 154.5 140 55.7
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.3e-35 152.9 134 52.2
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 3.0e-35 152.5 132 58.3
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 4.0e-35 152.1 132 59.1
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 4.0e-35 152.1 125 62.4
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 5.2e-35 151.8 146 52.7
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 5.2e-35 151.8 146 52.7
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 6.8e-35 151.4 146 52.7
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 8.8e-35 151.0 123 56.1
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.5e-34 150.2 213 40.8
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 2.0e-34 149.8 144 51.4
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 2.0e-34 149.8 149 51.0
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.3e-33 147.1 129 55.8
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.3e-33 147.1 129 56.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.7e-33 146.7 142 50.7
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.8e-33 146.0 146 50.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 2.8e-33 146.0 146 50.7
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 8.3e-33 144.4 141 51.8
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 8.3e-33 144.4 127 53.5
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 2.4e-32 142.9 145 48.3
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 1.6e-31 140.2 133 55.6
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 7.7e-31 137.9 143 49.0
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.0e-30 135.2 142 50.0
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 8.6e-30 134.4 157 51.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 8.6e-30 134.4 161 48.4
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 4.7e-28 128.6 118 52.5
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.4e-27 127.1 96 63.5
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 8.8e-27 124.4 168 48.2
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.6e-26 122.9 108 52.8
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.9e-25 118.6 129 47.3
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 2.4e-24 116.3 82 65.9
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 5.4e-24 115.2 118 44.9
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.0e-22 108.6 87 69.0
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.6e-22 108.2 94 61.7
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.9e-21 106.7 87 66.7
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 7.3e-21 104.8 82 52.4
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 9.5e-21 104.4 85 63.5
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 9.5e-21 104.4 86 65.1
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.6e-20 102.4 94 59.6
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.0e-19 100.9 128 43.8
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.4e-19 100.5 90 64.4
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 1.8e-19 100.1 90 54.4
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 6.8e-19 98.2 137 40.9
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.3e-17 94.0 79 54.4
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 3.2e-16 89.4 130 39.2
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.9e-14 82.4 67 62.7
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 3.6e-12 75.9 56 58.9
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.1e-11 72.8 78 41.0
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 3.1e-11 72.8 60 63.3
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 9.8e-10 67.8 89 42.7


User provided reference genes

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