Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 6.5e-88 327.4 169 100.0
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.3e-72 276.6 169 84.0
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 5.5e-71 271.2 169 82.2
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 5.0e-64 248.1 172 77.9
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.4e-63 246.5 171 78.4
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 5.4e-34 148.3 169 48.5
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.5e-31 139.4 169 44.4
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 7.3e-31 137.9 169 45.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 6.1e-30 134.8 166 45.8
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.8e-29 133.3 168 46.4
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.1e-29 132.5 166 42.2
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 4.0e-29 132.1 166 44.6
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 5.2e-29 131.7 167 44.3
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 5.2e-29 131.7 173 42.8
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 6.8e-29 131.3 166 45.8
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.5e-28 130.2 171 43.3
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 2.6e-28 129.4 166 47.0
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 4.4e-28 128.6 166 44.6
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 9.8e-28 127.5 169 41.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.3e-27 127.1 166 41.0
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.9e-27 125.9 169 41.4
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.9e-27 125.9 175 43.4
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.9e-27 125.9 170 43.5
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 3.7e-27 125.6 172 43.0
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 8.3e-27 124.4 167 43.7
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.1e-26 124.0 173 46.2
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.9e-26 123.2 169 40.2
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 2.4e-26 122.9 165 41.2
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.2e-26 122.5 167 40.7
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 3.2e-26 122.5 173 45.7
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 3.2e-26 122.5 169 42.0
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 4.1e-26 122.1 166 43.4
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 5.4e-26 121.7 169 43.2
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 7.0e-26 121.3 173 45.1
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 9.2e-26 120.9 168 40.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.2e-25 120.6 166 43.4
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.2e-25 120.6 166 42.8
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.2e-25 120.6 170 42.9
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 3.5e-25 119.0 169 41.4
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 3.5e-25 119.0 169 40.2
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.0e-24 117.5 167 42.5
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.0e-24 117.5 166 41.0
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.3e-24 117.1 169 42.0
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.3e-24 117.1 169 42.0
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.7e-24 116.7 169 42.0
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 5.0e-24 115.2 170 41.8
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.0e-24 115.2 170 41.8
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 6.6e-24 114.8 168 42.9
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.6e-24 114.8 166 38.6
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 8.6e-24 114.4 166 38.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.3e-23 112.5 166 38.0
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.3e-23 112.1 170 40.6
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 4.3e-23 112.1 169 40.2
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 7.3e-23 111.3 178 43.3
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.5e-23 110.9 166 39.2
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 2.8e-22 109.4 172 41.9
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.6e-22 109.0 168 40.5
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 4.7e-22 108.6 166 38.6
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.1e-21 107.5 166 38.0
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.8e-21 106.7 170 40.6
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.8e-21 106.7 169 39.1
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 2.3e-21 106.3 166 39.2
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.3e-21 106.3 178 41.0
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 3.1e-21 105.9 179 43.0
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.2e-21 105.1 167 40.1
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.2e-20 104.0 167 40.1
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.2e-20 104.0 167 40.1
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.2e-20 104.0 167 39.5
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.5e-20 103.6 167 39.5
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.0e-20 103.2 166 39.8
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 2.6e-20 102.8 171 42.1
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.6e-20 102.8 171 41.5
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.6e-20 102.8 164 39.6
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.6e-20 102.8 166 37.3
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.4e-20 102.4 167 40.1
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 3.4e-20 102.4 170 38.8
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 7.5e-20 101.3 162 38.9
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.8e-20 100.9 166 36.1
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 9.8e-20 100.9 166 37.3
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.7e-19 100.1 158 38.6
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 6.4e-19 98.2 165 35.8
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 6.4e-19 98.2 169 37.3
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.4e-18 96.3 172 36.6
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 3.2e-18 95.9 165 39.4
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.0e-18 94.7 171 37.4
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.2e-18 94.4 169 37.3
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 9.2e-18 94.4 165 36.4
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.6e-17 93.6 214 33.2
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 2.7e-17 92.8 144 38.9
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 3.5e-17 92.4 167 36.5
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 7.8e-17 91.3 215 33.5
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.0e-16 90.9 166 35.5
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.7e-16 90.1 167 35.9
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 2.3e-16 89.7 181 35.9
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.3e-16 89.7 166 35.5
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 3.9e-16 89.0 180 36.1
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 3.9e-16 89.0 180 36.1
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 5.1e-16 88.6 188 34.0
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.1e-15 87.4 180 35.6
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.1e-15 87.4 160 38.1
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.5e-15 87.0 188 33.0
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 2.5e-15 86.3 177 35.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 3.3e-15 85.9 174 34.5
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 4.3e-15 85.5 183 34.4
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 5.6e-15 85.1 163 35.6
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 5.6e-15 85.1 170 33.5
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 7.3e-15 84.7 167 36.5
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 9.5e-15 84.3 219 32.0
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 2.8e-14 82.8 191 33.0
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 8.1e-14 81.3 176 31.8
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.8e-13 80.1 143 35.0
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.3e-13 79.7 166 36.1
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 2.3e-13 79.7 201 32.3
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.3e-13 79.7 170 34.7
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.2e-12 77.4 178 34.3
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.6e-12 76.3 168 30.4
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 5.8e-12 75.1 139 38.1
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 7.5e-12 74.7 171 35.1
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 2.2e-11 73.2 151 31.1
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 2.2e-11 73.2 169 35.5
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 8.3e-11 71.2 166 32.5
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.1e-10 70.9 165 32.1
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.1e-10 70.9 170 34.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.4e-10 70.5 196 32.7
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 2.4e-10 69.7 172 30.2
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.1e-10 68.9 160 35.0
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 7.1e-10 68.2 154 36.4
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 7.1e-10 68.2 149 33.6
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 9.2e-10 67.8 130 36.2
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.9e-07 60.1 161 29.2
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 3.3e-07 59.3 161 31.7
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.3e-07 58.9 161 28.6


User provided reference genes

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