Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023950 Sechium edule HOM05D003943 ORTHO05D004753 1.0e-145 520.0 261 100.0
Sed0024685 Sechium edule HOM05D003943 ORTHO05D004753 6.8e-145 517.3 261 99.2
ClCG01G015010 Citrullus lanatus HOM05D003943 ORTHO05D004753 4.1e-142 508.1 261 97.3
CsaV3_6G041100 Cucumis sativus L. HOM05D003943 ORTHO05D004753 7.8e-141 503.8 261 96.2
MELO3C024586.2 Cucumis melo HOM05D003943 ORTHO05D004753 6.6e-140 500.7 261 95.4
Oeu049654.1 Olea europaea HOM05D003943 ORTHO05D004753 3.3e-139 498.4 261 94.3
CiPaw.10G017400 Carya illinoinensis HOM05D003943 ORTHO05D004753 1.2e-138 496.5 261 95.0
PGR004G2105 Punica granatum HOM05D003943 ORTHO05D004753 2.1e-138 495.7 261 94.3
PGR142G4032 Punica granatum HOM05D003943 ORTHO05D004753 2.1e-138 495.7 261 94.3
TWI77G0554 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 3.6e-138 495.0 261 94.6
MSTRG.10894 Avicennia marina HOM05D003943 ORTHO05D004753 6.2e-138 494.2 261 93.5
Oeu039454.1 Olea europaea HOM05D003943 ORTHO05D004753 6.2e-138 494.2 260 93.8
Ciclev10012509m.g Citrus clementina HOM05D003943 ORTHO05D004753 8.1e-138 493.8 261 94.6
Nn2g14305 Nelumbo nucifera HOM05D003943 ORTHO05D004753 8.1e-138 493.8 261 94.3
TWI74G1172 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 1.1e-137 493.4 261 94.3
Dinv20358 Davidia involucrata HOM05D003943 ORTHO05D004753 1.4e-137 493.0 261 93.5
CDE10G1025 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 2.3e-137 492.3 261 93.5
Atru.chr12.911 Acer truncatum HOM05D003943 ORTHO05D004753 3.1e-137 491.9 261 94.3
Atru.chr8.1362 Acer truncatum HOM05D003943 ORTHO05D004753 3.1e-137 491.9 261 94.3
Eucgr.K02620 Eucalyptus grandis HOM05D003943 ORTHO05D004753 4.0e-137 491.5 261 93.9
unitig_32.g11085 Utricularia gibba HOM05D003943 ORTHO05D004753 4.0e-137 491.5 260 93.5
TAR623G0676 Trochodendron aralioides HOM05D003943 ORTHO05D004753 6.8e-137 490.7 261 92.7
GSVIVG01011153001 Vitis vinifera HOM05D003943 ORTHO05D004753 8.9e-137 490.3 260 95.0
Manes.01G025400 Manihot esculenta HOM05D003943 ORTHO05D004753 1.2e-136 490.0 261 93.1
CSS0000599 Camellia sinensis var. sinensis HOM05D003943 ORTHO05D004753 1.5e-136 489.6 258 94.6
Lsat_1_v5_gn_4_88760 Lactuca sativa HOM05D003943 ORTHO05D004753 2.6e-136 488.8 261 92.7
Manes.08G033500 Manihot esculenta HOM05D003943 ORTHO05D004753 2.6e-136 488.8 261 92.7
TAR633G0404 Trochodendron aralioides HOM05D003943 ORTHO05D004753 5.8e-136 487.6 261 92.3
THA.LOC104826802 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 7.5e-136 487.3 261 93.5
Migut.I01176 Erythranthe guttata HOM05D003943 ORTHO05D004753 9.8e-136 486.9 261 92.0
CANSAT64G2459 Cannabis sativa HOM05D003943 ORTHO05D004753 1.3e-135 486.5 261 92.3
Gorai.002G235200 Gossypium raimondii HOM05D003943 ORTHO05D004753 1.3e-135 486.5 261 92.0
Lsat_1_v5_gn_6_32361 Lactuca sativa HOM05D003943 ORTHO05D004753 1.3e-135 486.5 260 92.7
QL07p036748 Quercus lobata HOM05D003943 ORTHO05D004753 1.3e-135 486.5 260 93.1
Actinidia38793 Actinidia chinensis HOM05D003943 ORTHO05D004753 1.7e-135 486.1 261 93.1
Gohir.A09G134200 Gossypium hirsutum HOM05D003943 ORTHO05D004753 2.2e-135 485.7 261 91.6
Gorai.006G149400 Gossypium raimondii HOM05D003943 ORTHO05D004753 2.2e-135 485.7 261 91.6
Lj6A21G25 Lonicera japonica HOM05D003943 ORTHO05D004753 2.2e-135 485.7 261 92.0
Potri.006G203400 Populus trichocarpa HOM05D003943 ORTHO05D004753 2.2e-135 485.7 261 92.7
Gohir.D01G191300 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.7e-135 485.0 261 91.6
Sabra16G0070600 Salix brachista HOM05D003943 ORTHO05D004753 3.7e-135 485.0 261 92.7
Sabra16G0072800 Salix brachista HOM05D003943 ORTHO05D004753 3.7e-135 485.0 261 92.7
Actinidia21868 Actinidia chinensis HOM05D003943 ORTHO05D004753 4.9e-135 484.6 261 92.3
Cpa.g.sc104.32 Carica papaya HOM05D003943 ORTHO05D004753 4.9e-135 484.6 261 92.3
Prupe.4G241300 Prunus persica HOM05D003943 ORTHO05D004753 4.9e-135 484.6 261 92.3
Rhsim08G0248000 Rhododendron simsii HOM05D003943 ORTHO05D004753 4.9e-135 484.6 261 91.2
SalBow6G5742 Salvia bowleyana HOM05D003943 ORTHO05D004753 4.9e-135 484.6 261 91.2
Haze_03432 Corylus avellana HOM05D003943 ORTHO05D004753 6.4e-135 484.2 261 93.5
Haze_20185 Corylus avellana HOM05D003943 ORTHO05D004753 6.4e-135 484.2 261 93.5
COL.COLO4_29575 Corchorus olitorius HOM05D003943 ORTHO05D004753 1.1e-134 483.4 261 92.3
Lj6A3G40 Lonicera japonica HOM05D003943 ORTHO05D004753 1.1e-134 483.4 260 91.9
Potri.016G070400 Populus trichocarpa HOM05D003943 ORTHO05D004753 1.1e-134 483.4 261 92.0
Gohir.A01G201400 Gossypium hirsutum HOM05D003943 ORTHO05D004753 1.4e-134 483.0 261 91.6
RcHm_v2.0_Chr2g0122251 Rosa chinensis HOM05D003943 ORTHO05D004753 4.1e-134 481.5 261 91.6
RcHm_v2.0_Chr4g0409741 Rosa chinensis HOM05D003943 ORTHO05D004753 4.1e-134 481.5 261 91.6
THA.LOC104809953 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 4.1e-134 481.5 261 92.3
Duzib093G1950 Durio zibethinus HOM05D003943 ORTHO05D004753 5.4e-134 481.1 261 91.2
Thecc.05G104300 Theobroma cacao HOM05D003943 ORTHO05D004753 5.4e-134 481.1 261 91.6
vmacro18760 Vaccinium macrocarpon HOM05D003943 ORTHO05D004753 5.4e-134 481.1 265 90.2
Aa31sc52G210 Aethionema arabicum HOM05D003943 ORTHO05D004753 7.1e-134 480.7 261 92.0
ATR0772G207 Amborella trichopoda HOM05D003943 ORTHO05D004753 7.1e-134 480.7 261 90.4
AT5G06360 Arabidopsis thaliana HOM05D003943 ORTHO05D004753 7.1e-134 480.7 261 92.0
Sopen09g036280 Solanum pennellii HOM05D003943 ORTHO05D004753 7.1e-134 480.7 261 92.3
Phvul.010G103000 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 9.2e-134 480.3 261 92.0
Cc04_g00390 Coffea canephora HOM05D003943 ORTHO05D004753 1.2e-133 479.9 269 89.6
FvH4_1g24730 Fragaria vesca HOM05D003943 ORTHO05D004753 1.2e-133 479.9 261 91.2
FvH4_1g24810 Fragaria vesca HOM05D003943 ORTHO05D004753 1.2e-133 479.9 261 91.2
FAN19G3070 Fragaria x ananassa HOM05D003943 ORTHO05D004753 1.2e-133 479.9 261 91.2
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea HOM05D003943 ORTHO05D004753 1.6e-133 479.6 261 91.6
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea HOM05D003943 ORTHO05D004753 1.6e-133 479.6 261 91.6
PGSC0003DMG400021625 Solanum tuberosum HOM05D003943 ORTHO05D004753 2.1e-133 479.2 261 92.0
VMungo0331G0074 Vigna mungo HOM05D003943 ORTHO05D004753 2.7e-133 478.8 261 91.6
VMungo0720G1310 Vigna mungo HOM05D003943 ORTHO05D004753 2.7e-133 478.8 261 91.6
Cfa010504 Carpinus fangiana HOM05D003943 ORTHO05D004753 3.5e-133 478.4 261 92.0
HanXRQChr09g0277391 Helianthus annuus HOM05D003943 ORTHO05D004753 4.6e-133 478.0 261 91.6
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla HOM05D003943 ORTHO05D004753 4.6e-133 478.0 259 92.3
Phvul.007G268100 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 4.6e-133 478.0 261 91.6
Glyma.02G196900 Glycine max HOM05D003943 ORTHO05D004753 6.0e-133 477.6 261 91.2
HanXRQChr17g0533251 Helianthus annuus HOM05D003943 ORTHO05D004753 1.0e-132 476.9 261 91.2
Lalb_Chr02g0144091 Lupinus albus HOM05D003943 ORTHO05D004753 1.0e-132 476.9 261 91.6
Hund10875 Selenicereus undatus HOM05D003943 ORTHO05D004753 1.0e-132 476.9 261 91.2
Glyma.10G081400 Glycine max HOM05D003943 ORTHO05D004753 2.3e-132 475.7 261 90.4
Glyma.10G002300 Glycine max HOM05D003943 ORTHO05D004753 3.0e-132 475.3 261 90.4
Sp6g36490 Schrenkiella parvula HOM05D003943 ORTHO05D004753 3.0e-132 475.3 261 90.8
Lalb_Chr11g0067891 Lupinus albus HOM05D003943 ORTHO05D004753 5.1e-132 474.6 261 91.2
MD05G1235300 Malus domestica HOM05D003943 ORTHO05D004753 1.5e-131 473.0 261 89.7
MD10G1211300 Malus domestica HOM05D003943 ORTHO05D004753 3.3e-131 471.9 261 89.7
Lj1g0010263 Lotus japonicus HOM05D003943 ORTHO05D004753 4.3e-131 471.5 261 88.9
Carub.0006s0525 Capsella rubella HOM05D003943 ORTHO05D004753 7.3e-131 470.7 261 90.8
Ca_16636_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 7.3e-131 470.7 261 90.0
Aqoxy1G00659 Aquilegia oxysepala HOM05D003943 ORTHO05D004753 1.2e-130 469.9 261 90.0
AL6G16440 Arabidopsis lyrata HOM05D003943 ORTHO05D004753 1.2e-130 469.9 261 90.4
HPP92_002146 Vanilla planifolia HOM05D003943 ORTHO05D004753 1.2e-130 469.9 256 90.6
ECA233G4676 Erigeron canadensis HOM05D003943 ORTHO05D004753 1.6e-130 469.5 261 90.0
Sabra06G0156600 Salix brachista HOM05D003943 ORTHO05D004753 2.8e-130 468.8 285 84.6
SGA_v2.0_scaffold71G24009 Striga asiatica HOM05D003943 ORTHO05D004753 4.7e-130 468.0 261 89.7
C02p02670 Brassica napus HOM05D003943 ORTHO05D004753 8.1e-130 467.2 261 89.7
BolC2t06233H Brassica oleracea HOM05D003943 ORTHO05D004753 8.1e-130 467.2 261 89.7
BcaB05g21673 Brassica carinata HOM05D003943 ORTHO05D004753 1.1e-129 466.8 261 89.3
PSO384G4082 Papaver somniferum HOM05D003943 ORTHO05D004753 1.1e-129 466.8 261 88.1
BcaC03g13169 Brassica carinata HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 89.3
Ca_11700_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 89.7
Thhalv10014439m.g Eutrema salsugineum HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 89.7
PSO339G3654 Papaver somniferum HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 87.7
C09p70420 Brassica napus HOM05D003943 ORTHO05D004753 2.3e-129 465.7 260 89.6
BolC9t59788H Brassica oleracea HOM05D003943 ORTHO05D004753 2.3e-129 465.7 260 89.6
Pp3c7_2280 Physcomitrium patens HOM05D003943 ORTHO05D004753 2.3e-129 465.7 261 87.4
Psat6g114680 Pisum sativum HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 88.9
CARHR207110 Cardamine hirsuta HOM05D003943 ORTHO05D004753 4.0e-129 464.9 261 87.0
Peaxi162Scf00286g00330 Petunia axillaris HOM05D003943 ORTHO05D004753 5.2e-129 464.5 264 88.6
Mapoly0020s0123 Marchantia polymorpha HOM05D003943 ORTHO05D004753 8.9e-129 463.8 261 87.4
BraA02t04878Z Brassica rapa HOM05D003943 ORTHO05D004753 1.2e-128 463.4 260 89.2
AUR62036383 Chenopodium quinoa HOM05D003943 ORTHO05D004753 1.5e-128 463.0 261 88.5
A10p30010 Brassica napus HOM05D003943 ORTHO05D004753 2.6e-128 462.2 259 89.6
BraA10t45041Z Brassica rapa HOM05D003943 ORTHO05D004753 2.6e-128 462.2 259 89.6
Nitab4.5_0008073g0030 Nicotiana tabacum HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 89.3
TPR.G5876 Trifolium pratense HOM05D003943 ORTHO05D004753 5.8e-128 461.1 261 89.7
EL10Ac5g12966 Beta vulgaris HOM05D003943 ORTHO05D004753 9.9e-128 460.3 260 88.8
FAN23G0735 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.9e-128 460.3 277 84.8
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 85.1
SMO367G0573 Selaginella moellendorffii HOM05D003943 ORTHO05D004753 4.9e-127 458.0 261 85.4
AUR62030745 Chenopodium quinoa HOM05D003943 ORTHO05D004753 1.9e-126 456.1 256 88.3
Medtr3g088865 Medicago truncatula HOM05D003943 ORTHO05D004753 1.9e-126 456.1 261 86.6
Ah.12g059190 Amaranthus hybridus HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 86.2
CiPaw.09G020900 Carya illinoinensis HOM05D003943 ORTHO05D004753 4.6e-125 451.4 240 94.2
Lj2g0010046 Lotus japonicus HOM05D003943 ORTHO05D004753 1.1e-123 446.8 261 86.2
Medtr0508s0010 Medicago truncatula HOM05D003943 ORTHO05D004753 1.1e-123 446.8 261 86.2
CBR_g12036 Chara braunii HOM05D003943 ORTHO05D004753 1.5e-123 446.4 261 83.1
TPR.G2813 Trifolium pratense HOM05D003943 ORTHO05D004753 3.6e-122 441.8 276 83.0
Os07g0673100 Oryza sativa ssp. japonica HOM05D003943 ORTHO05D004753 3.1e-121 438.7 261 85.1
FAN19G1372 Fragaria x ananassa HOM05D003943 ORTHO05D004753 4.0e-121 438.3 241 90.5
FAN28G2380 Fragaria x ananassa HOM05D003943 ORTHO05D004753 1.2e-120 436.8 241 90.0
Zm00001eb111290 Zea mays HOM05D003943 ORTHO05D004753 5.1e-116 421.4 261 81.6
Zm00001eb330440 Zea mays HOM05D003943 ORTHO05D004753 5.1e-116 421.4 261 81.6
Gohir.D09G130700 Gossypium hirsutum HOM05D003943 ORTHO05D004753 8.7e-116 420.6 261 82.8
MCO03G138 Micromonas commoda HOM05D003943 ORTHO05D004753 1.3e-114 416.8 261 75.5
PRCOL_00000915 Prasinoderma coloniale HOM05D003943 ORTHO05D004753 1.6e-114 416.4 261 80.1
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis HOM05D003943 ORTHO05D004753 2.6e-112 409.1 266 78.2
Cre12.g507300 Chlamydomonas reinhardtii HOM05D003943 ORTHO05D004753 2.6e-112 409.1 261 77.8
PGSC0003DMG400029099 Solanum tuberosum HOM05D003943 ORTHO05D004753 4.9e-111 404.8 261 80.8
Dinv37798 Davidia involucrata HOM05D003943 ORTHO05D004753 5.4e-110 401.4 213 92.5
Rhsim05G0206200 Rhododendron simsii HOM05D003943 ORTHO05D004753 7.1e-110 401.0 261 79.7
Sc14g0006610 Simmondsia chinensis HOM05D003943 ORTHO05D004753 1.0e-108 397.1 222 90.1
FAN26G0481 Fragaria x ananassa HOM05D003943 ORTHO05D004753 6.6e-108 394.4 337 64.1
CAN.G710.48 Capsicum annuum HOM05D003943 ORTHO05D004753 5.6e-107 391.3 309 69.9
unitig_748.g7832 Utricularia gibba HOM05D003943 ORTHO05D004753 8.1e-106 387.5 201 93.5
DCAR_016668 Daucus carota HOM05D003943 ORTHO05D004753 1.8e-105 386.3 254 78.0
DCAR_017903 Daucus carota HOM05D003943 ORTHO05D004753 7.6e-104 380.9 240 80.0
Aa31LG3G5080 Aethionema arabicum HOM05D003943 ORTHO05D004753 3.9e-100 368.6 198 92.4
SEGI_04875 Sequoiadendron giganteum HOM05D003943 ORTHO05D004753 6.7e-100 367.9 195 90.8
Nitab4.5_0003291g0080 Nicotiana tabacum HOM05D003943 ORTHO05D004753 5.5e-94 348.2 256 74.6
Haze_27191 Corylus avellana HOM05D003943 ORTHO05D004753 2.5e-91 339.3 260 64.6
FAN23G1436 Fragaria x ananassa HOM05D003943 ORTHO05D004753 5.9e-88 328.2 177 89.8
Peaxi162Scf01149g00220 Petunia axillaris HOM05D003943 ORTHO05D004753 8.2e-82 307.8 161 91.3
Cfa024104 Carpinus fangiana HOM05D003943 ORTHO05D123184 1.2e-72 277.3 229 60.7
TPR.G6300 Trifolium pratense HOM05D003943 ORTHO05D004753 2.0e-67 260.0 240 59.2
CDE10G0110 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 5.5e-62 241.9 135 91.1
BcaC06g32370 Brassica carinata HOM05D003943 ORTHO05D004753 1.3e-58 230.7 142 84.5
BcaNung06320 Brassica carinata HOM05D003943 ORTHO05D004753 2.2e-58 229.9 143 83.9
CDE10G0220 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 2.4e-57 226.5 113 95.6
SHI12410 Sapria himalayana HOM05D003943 ORTHO05D004753 5.4e-49 198.7 98 94.9
RcHm_v2.0_Chr7g0216551 Rosa chinensis HOM05D003943 ORTHO05D004753 1.0e-44 184.5 271 47.6
Lsat_1_v5_gn_8_162181 Lactuca sativa HOM05D003943 ORTHO05D004753 6.8e-44 181.8 109 83.5
Duzib106G1686 Durio zibethinus HOM05D003943 ORTHO05D004753 1.4e-41 174.1 196 53.1
RcHm_v2.0_Chr7g0216591 Rosa chinensis HOM05D003943 ORTHO05D004753 1.7e-39 167.2 108 77.8
EL10Ac3g06422 Beta vulgaris HOM05D003943 ORTHO05D004753 3.3e-38 162.9 135 63.7
HanXRQChr03g0072971 Helianthus annuus HOM05D003943 ORTHO05D004753 1.0e-36 157.9 92 83.7
Lj9C540G13 Lonicera japonica HOM05D003943 ORTHO05D004753 2.0e-35 153.7 195 48.7
BcaC01g01015 Brassica carinata HOM05D003943 ORTHO05D004753 5.7e-35 152.1 100 82.0
Lsat_1_v5_gn_6_65181 Lactuca sativa HOM05D003943 ORTHO05D000236 7.3e-30 135.2 92 75.0
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 4.7e-29 132.5 81 82.7
Actinidia21636 Actinidia chinensis HOM05D003943 ORTHO05D004753 6.0e-24 115.5 111 61.3
SHI12416 Sapria himalayana HOM05D001600 ORTHO05D001502 8.1e-21 105.1 64 82.8
RcHm_v2.0_Chr7g0216581 Rosa chinensis HOM05D003943 ORTHO05D004753 9.5e-14 81.6 81 58.0
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 9.9e-11 71.6 56 69.6
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 1.9e-09 67.4 59 61.0
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 1.6e-08 64.3 62 59.7
SHI32256 Sapria himalayana HOM05D003943 ORTHO05D001502 1.6e-08 64.3 35 85.7
BcaC05g26689 Brassica carinata HOM05D003943 ORTHO05D004753 2.1e-08 63.9 38 78.9
Nitab4.5_0006519g0020 Nicotiana tabacum HOM05D000032 ORTHO05D005217 2.7e-08 63.5 52 67.3
C03p87270 Brassica napus HOM05D000836 ORTHO05D000709 4.6e-08 62.8 85 43.5
C04p30500 Brassica napus HOM05D002284 ORTHO05D033292 4.6e-08 62.8 34 88.2
BolC4t24585H Brassica oleracea HOM05D002284 ORTHO05D033292 8.6e-07 58.5 34 82.4


User provided reference genes

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