Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 6.4e-64 247.3 128 100.0
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 1.1e-52 209.9 130 87.7
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 4.5e-49 198.0 135 74.1
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.0e-48 196.8 135 74.1
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.3e-48 196.4 135 72.6
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.3e-48 196.4 135 72.6
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.7e-48 196.1 135 72.6
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 2.9e-48 195.3 139 72.7
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 8.4e-48 193.7 136 73.5
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 1.9e-47 192.6 127 75.6
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 7.1e-47 190.7 139 70.5
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.6e-46 189.5 128 76.6
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.6e-46 189.5 128 76.6
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 5.1e-45 184.5 135 71.9
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.9e-44 182.6 111 88.3
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 2.5e-44 182.2 135 71.9
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 2.5e-44 182.2 137 70.8
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 3.3e-44 181.8 138 69.6
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 1.3e-43 179.9 134 69.4
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 2.2e-43 179.1 127 71.7
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 8.2e-43 177.2 131 68.7
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 1.8e-42 176.0 137 68.6
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 2.4e-42 175.6 143 65.0
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.4e-42 175.6 137 69.3
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.2e-41 173.3 131 67.2
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.5e-41 172.9 131 67.2
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 4.5e-41 171.4 131 66.4
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 5.9e-41 171.0 128 68.8
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 7.7e-41 170.6 123 71.5
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 1.0e-40 170.2 127 68.5
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.7e-40 169.5 131 65.6
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 1.7e-40 169.5 135 65.2
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 2.9e-40 168.7 131 67.2
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.9e-40 168.7 131 64.9
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 5.0e-40 167.9 131 64.9
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 5.0e-40 167.9 131 64.9
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 6.5e-40 167.5 132 63.6
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 1.1e-39 166.8 133 61.7
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.5e-39 165.6 123 70.7
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 3.2e-39 165.2 137 66.4
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 9.4e-39 163.7 135 64.4
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 9.4e-39 163.7 133 63.2
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 9.4e-39 163.7 134 64.9
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 1.2e-38 163.3 132 65.2
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.2e-38 163.3 132 63.6
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.2e-38 163.3 136 66.2
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 2.1e-38 162.5 134 60.4
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.1e-38 162.5 136 62.5
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 2.1e-38 162.5 130 65.4
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 2.7e-38 162.2 132 63.6
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 3.6e-38 161.8 123 69.9
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 3.6e-38 161.8 133 63.9
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 3.6e-38 161.8 120 72.5
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 6.1e-38 161.0 135 61.5
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 6.1e-38 161.0 135 61.5
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 1.0e-37 160.2 130 64.6
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.4e-37 159.8 123 69.1
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 1.4e-37 159.8 134 61.2
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 2.3e-37 159.1 134 59.7
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 3.0e-37 158.7 133 63.2
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 6.7e-37 157.5 131 61.8
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 8.8e-37 157.1 126 67.5
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.1e-36 156.8 138 57.2
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 2.0e-36 156.0 126 62.7
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 2.5e-36 155.6 137 56.9
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.5e-36 155.6 123 67.5
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 5.7e-36 154.5 133 57.9
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 5.7e-36 154.5 133 57.9
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 7.4e-36 154.1 137 55.5
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 9.7e-36 153.7 96 86.5
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 9.7e-36 153.7 121 66.9
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.3e-35 153.3 127 63.8
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.7e-35 152.9 136 58.1
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 2.8e-35 152.1 124 66.1
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 2.8e-35 152.1 128 64.8
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 2.8e-35 152.1 115 68.7
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 8.2e-35 150.6 133 60.9
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 4.1e-34 148.3 128 62.5
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 5.3e-34 147.9 121 64.5
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 5.9e-33 144.4 121 62.0
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 1.3e-32 143.3 137 56.2
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 6.5e-32 141.0 133 54.1
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 8.5e-32 140.6 120 61.7
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 8.5e-32 140.6 126 61.1
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 2.5e-31 139.0 113 61.1
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.2e-30 136.7 130 56.9
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 2.7e-30 135.6 113 61.9
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.4e-29 133.3 121 62.0
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 3.0e-29 132.1 119 57.1
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.3e-28 128.6 114 59.6
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 1.1e-26 123.6 125 55.2
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 2.4e-26 122.5 130 54.6
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 4.1e-26 121.7 108 59.3
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.5e-25 119.8 135 49.6
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 5.9e-25 117.9 110 59.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 2.5e-23 112.5 95 64.2
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 1.0e-21 107.1 124 48.4
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 8.8e-21 104.0 129 47.3
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 2.0e-17 92.8 131 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 1.2e-14 83.6 127 42.5
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.9e-07 59.7 51 60.8


User provided reference genes

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