Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 3.4e-49 198.0 96 100.0
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 1.2e-43 179.5 96 88.5
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 3.0e-42 174.9 96 85.4
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 5.0e-37 157.5 94 77.7
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 6.6e-37 157.1 94 78.7
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 8.6e-37 156.8 95 75.8
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 1.1e-36 156.4 79 89.9
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 1.1e-36 156.4 94 77.7
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 1.1e-36 156.4 95 75.8
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 1.9e-36 155.6 79 89.9
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 2.5e-36 155.2 80 87.5
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 2.5e-36 155.2 80 87.5
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 2.5e-36 155.2 80 87.5
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 2.5e-36 155.2 90 80.0
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 2.5e-36 155.2 80 90.0
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 3.3e-36 154.8 92 78.3
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 3.3e-36 154.8 79 87.3
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 4.3e-36 154.5 94 75.5
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 5.6e-36 154.1 94 76.6
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 7.3e-36 153.7 88 79.5
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 7.3e-36 153.7 79 86.1
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 9.5e-36 153.3 94 74.5
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 9.5e-36 153.3 94 74.5
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 9.5e-36 153.3 94 74.5
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 1.2e-35 152.9 84 82.1
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 1.2e-35 152.9 84 82.1
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 1.2e-35 152.9 94 74.5
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 1.6e-35 152.5 93 76.3
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 1.6e-35 152.5 86 79.1
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 2.8e-35 151.8 79 87.3
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.6e-35 151.4 94 73.4
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.6e-35 151.4 94 73.4
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 3.6e-35 151.4 90 76.7
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 3.6e-35 151.4 95 71.6
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 4.7e-35 151.0 79 87.3
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 4.7e-35 151.0 79 87.3
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 6.1e-35 150.6 90 75.6
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 6.1e-35 150.6 84 81.0
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 8.0e-35 150.2 90 73.3
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 8.0e-35 150.2 92 73.9
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 8.0e-35 150.2 80 83.8
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 1.0e-34 149.8 79 84.8
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 1.0e-34 149.8 79 86.1
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 1.4e-34 149.4 80 83.8
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 1.4e-34 149.4 79 83.5
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 1.8e-34 149.1 80 83.8
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 3.1e-34 148.3 90 72.2
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 3.1e-34 148.3 79 83.5
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 3.1e-34 148.3 79 83.5
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 3.1e-34 148.3 79 83.5
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 3.1e-34 148.3 79 88.6
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 4.0e-34 147.9 79 82.3
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 5.2e-34 147.5 95 72.6
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 8.9e-34 146.7 90 71.1
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 8.9e-34 146.7 90 71.1
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 8.9e-34 146.7 81 82.7
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 8.9e-34 146.7 94 74.5
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 8.9e-34 146.7 94 70.2
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 8.9e-34 146.7 79 84.8
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 8.9e-34 146.7 79 84.8
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.2e-33 146.4 80 81.2
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 1.2e-33 146.4 80 81.2
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 1.2e-33 146.4 86 75.6
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 1.5e-33 146.0 91 73.6
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 1.5e-33 146.0 80 82.5
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 1.5e-33 146.0 89 77.5
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 2.0e-33 145.6 79 82.3
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 2.0e-33 145.6 90 72.2
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 2.6e-33 145.2 94 70.2
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 2.6e-33 145.2 79 84.8
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 4.4e-33 144.4 90 70.0
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 4.4e-33 144.4 79 81.0
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 4.4e-33 144.4 81 79.0
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 5.8e-33 144.1 79 86.1
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 5.8e-33 144.1 93 71.0
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 5.8e-33 144.1 76 85.5
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 7.5e-33 143.7 89 71.9
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 7.5e-33 143.7 94 67.0
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 9.8e-33 143.3 93 72.0
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 1.3e-32 142.9 84 73.8
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 1.3e-32 142.9 90 68.9
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 1.3e-32 142.9 87 71.3
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.7e-32 142.5 86 76.7
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 1.7e-32 142.5 90 68.9
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 2.9e-32 141.7 79 82.3
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 2.9e-32 141.7 79 82.3
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 3.7e-32 141.4 82 76.8
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 3.7e-32 141.4 82 76.8
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 4.9e-32 141.0 88 70.5
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 4.9e-32 141.0 88 70.5
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 6.4e-32 140.6 79 79.7
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 6.4e-32 140.6 98 70.4
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 6.4e-32 140.6 83 72.3
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 8.3e-32 140.2 85 75.3
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 1.4e-31 139.4 88 69.3
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 1.4e-31 139.4 88 69.3
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 3.2e-31 138.3 93 67.7
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 5.4e-31 137.5 93 67.7
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 1.2e-30 136.3 93 66.7
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 3.5e-30 134.8 90 66.7
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 1.3e-29 132.9 114 58.8
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 2.3e-29 132.1 89 68.5
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 3.9e-29 131.3 83 68.7
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 3.9e-29 131.3 68 86.8
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 6.6e-29 130.6 81 69.1
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 4.3e-28 127.9 66 84.8
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 1.1e-26 123.2 66 81.8
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 1.8e-26 122.5 79 70.9
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 2.3e-26 122.1 65 81.5
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 5.2e-26 120.9 66 80.3
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 5.8e-25 117.5 79 64.6
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 2.2e-24 115.5 69 78.3
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 3.7e-24 114.8 79 64.6
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 1.1e-23 113.2 72 72.2
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 2.4e-23 112.1 91 63.7
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 4.1e-23 111.3 63 76.2
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 1.2e-22 109.8 66 72.7
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 7.8e-22 107.1 75 61.3
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 1.0e-21 106.7 53 84.9
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 1.0e-21 106.7 63 74.6
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 1.3e-21 106.3 79 63.3
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 1.7e-21 105.9 62 75.8
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 4.3e-20 101.3 81 56.8
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 7.3e-20 100.5 63 68.3
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 2.1e-19 99.0 64 67.2
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 1.1e-18 96.7 53 83.0
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 2.4e-15 85.5 63 65.1
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 5.4e-15 84.3 48 72.9
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 5.4e-15 84.3 70 54.3
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 7.1e-15 84.0 47 80.9
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 3.5e-14 81.6 73 50.7
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 4.6e-14 81.3 80 48.8
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 7.8e-14 80.5 80 53.8
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 3.3e-12 75.1 46 71.7
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 8.1e-11 70.5 33 87.9
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 1.2e-06 56.6 60 41.7


User provided reference genes

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